RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 KRTAP4-5Q9BYR2 181 aa7.37□□□□□ -1.23
VAMP7-201ENST00000262640 OXTP01178 125 aa7.37□□□□□ -1.23
VAMP7-201ENST00000262640 PCP4P48539 62 aa7.37□□□□□ -1.23
VAMP7-201ENST00000262640 C8orf17Q9NRJ1 99 aa7.37□□□□□ -1.23
VAMP7-201ENST00000262640 MMP24-AS1A0A0U1RRL7 71 aa7.36□□□□□ -1.23
VAMP7-201ENST00000262640 WFDC13Q8IUB5 93 aa7.36□□□□□ -1.23
VAMP7-201ENST00000262640 CASC2Q6XLA1 102 aa7.36□□□□□ -1.23
VAMP7-201ENST00000262640 HERC2O95714 4834 aa7.35□□□□□ -1.23
VAMP7-201ENST00000262640 KRTAP29-1A8MX34 341 aaPredicted RBP7.35□□□□□ -1.23
VAMP7-201ENST00000262640 MT1HL1P0DM35 61 aa7.35□□□□□ -1.23
VAMP7-201ENST00000262640 SMIM20Q8N5G0 67 aa7.35□□□□□ -1.23
VAMP7-201ENST00000262640 FLG2Q5D862 2391 aaPredicted RBP7.34□□□□□ -1.23
VAMP7-201ENST00000262640 C8orf87E5RJ46 101 aa7.34□□□□□ -1.24
VAMP7-201ENST00000262640 hDV103S1A0JD37 113 aa7.33□□□□□ -1.24
VAMP7-201ENST00000262640 MYCBP2O75592 4640 aa7.32□□□□□ -1.24
VAMP7-201ENST00000262640 SERP2Q8N6R1 65 aa7.31□□□□□ -1.24
VAMP7-201ENST00000262640 TRAV7A0A075B6U4 112 aa7.3□□□□□ -1.24
VAMP7-201ENST00000262640 NOTCH2NLQ7Z3S9 236 aa7.3□□□□□ -1.24
VAMP7-201ENST00000262640 TMEM254Q8TBM7 123 aa7.3□□□□□ -1.24
VAMP7-201ENST00000262640 LINC00313P59037 77 aa7.29□□□□□ -1.24
VAMP7-201ENST00000262640 OCR1Q9BZK8 76 aa7.29□□□□□ -1.24
VAMP7-201ENST00000262640 RETNLBQ9BQ08 111 aa7.27□□□□□ -1.24
VAMP7-201ENST00000262640 MRPL34Q9BQ48 92 aaKnown RBP7.27□□□□□ -1.24
VAMP7-201ENST00000262640 COX7CP15954 63 aa7.27□□□□□ -1.25
VAMP7-201ENST00000262640 UQCRQO14949 82 aa7.25□□□□□ -1.25
VAMP7-201ENST00000262640 ABCA13Q86UQ4 5058 aa7.25□□□□□ -1.25
VAMP7-201ENST00000262640 FP248Q71RG6 208 aaPredicted RBP7.23□□□□□ -1.25
VAMP7-201ENST00000262640 KRTAP16-1A8MUX0 517 aa7.22□□□□□ -1.25
VAMP7-201ENST00000262640 TP53AIP1Q9HCN2 124 aa7.22□□□□□ -1.25
VAMP7-201ENST00000262640 CCDC179H3BU77 68 aa7.21□□□□□ -1.25
VAMP7-201ENST00000262640 NDUFS5O43920 106 aa7.21□□□□□ -1.25
VAMP7-201ENST00000262640 DMBT1Q9UGM3 2413 aaPredicted RBP7.2□□□□□ -1.26
VAMP7-201ENST00000262640 Q8N9P0 234 aaPredicted RBP7.19□□□□□ -1.26
VAMP7-201ENST00000262640 C5orf47Q569G3 176 aa7.18□□□□□ -1.26
VAMP7-201ENST00000262640 J3QL48 77 aa7.17□□□□□ -1.26
VAMP7-201ENST00000262640 C9orf92A6NGG3 77 aa7.17□□□□□ -1.26
VAMP7-201ENST00000262640 C20orf197Q8N268 126 aa7.16□□□□□ -1.26
VAMP7-201ENST00000262640 IGLV7-46A0A075B6I9 117 aa7.16□□□□□ -1.26
VAMP7-201ENST00000262640 MP68P56378 58 aa7.14□□□□□ -1.27
VAMP7-201ENST00000262640 TRAV22A0A0B4J277 110 aa7.13□□□□□ -1.27
VAMP7-201ENST00000262640 H0Y9P7 68 aa7.13□□□□□ -1.27
VAMP7-201ENST00000262640 KLKP1Q107X0 134 aa7.12□□□□□ -1.27
VAMP7-201ENST00000262640 A0A0U1RQV1 116 aa7.11□□□□□ -1.27
VAMP7-201ENST00000262640 PRR4Q16378 134 aa7.11□□□□□ -1.27
VAMP7-201ENST00000262640 H3BPC8 53 aa7.11□□□□□ -1.27
VAMP7-201ENST00000262640 C20orf166-AS1Q96NR2 134 aa7.1□□□□□ -1.27
VAMP7-201ENST00000262640 SNURFQ9Y675 71 aa7.1□□□□□ -1.27
VAMP7-201ENST00000262640 A8MUU9 505 aa7.09□□□□□ -1.27
VAMP7-201ENST00000262640 KRTAP13-3Q3SY46 172 aa7.09□□□□□ -1.27
VAMP7-201ENST00000262640 Q5W150 140 aa7.08□□□□□ -1.28
VAMP7-201ENST00000262640 LINC00208Q96KT6 92 aa7.08□□□□□ -1.28
VAMP7-201ENST00000262640 ZCCHC13Q8WW36 166 aaKnown RBP7.07□□□□□ -1.28
VAMP7-201ENST00000262640 CYSTM1Q9H1C7 97 aa7.06□□□□□ -1.28
VAMP7-201ENST00000262640 C1orf64Q8NEQ6 169 aa7.06□□□□□ -1.28
VAMP7-201ENST00000262640 Q75L30 129 aa7.05□□□□□ -1.28
VAMP7-201ENST00000262640 NDUFC1O43677 76 aa7.05□□□□□ -1.28
VAMP7-201ENST00000262640 TPRXLQ17RH7 258 aa7.04□□□□□ -1.28
VAMP7-201ENST00000262640 LOC101927531A0A1B0GV80 90 aa7.02□□□□□ -1.29
VAMP7-201ENST00000262640 XP32Q5T750 250 aa7.02□□□□□ -1.29
VAMP7-201ENST00000262640 H7BZZ5 65 aa7.01□□□□□ -1.29
VAMP7-201ENST00000262640 PCLOQ9Y6V0 5065 aa6.99□□□□□ -1.29
VAMP7-201ENST00000262640 RPL37P61927 97 aaKnown RBP6.99□□□□□ -1.29
VAMP7-201ENST00000262640 IGKV2-30P06310 120 aa6.97□□□□□ -1.29
VAMP7-201ENST00000262640 TMEM258P61165 79 aa6.97□□□□□ -1.29
VAMP7-201ENST00000262640 CYP4F30PQ9H0H9 118 aa6.96□□□□□ -1.3
VAMP7-201ENST00000262640 ATP11AUNQ6ZP68 121 aa6.95□□□□□ -1.3
VAMP7-201ENST00000262640 IGKV2D-30A0A075B6S6 120 aa6.93□□□□□ -1.3
VAMP7-201ENST00000262640 PCOTHQ58A44 107 aa6.93□□□□□ -1.3
VAMP7-201ENST00000262640 C7orf65Q6ZTY9 151 aa6.91□□□□□ -1.3
VAMP7-201ENST00000262640 FAM236DA0A1B0GTK5 79 aa6.9□□□□□ -1.31
VAMP7-201ENST00000262640 FAM236CP0DP71 79 aa6.9□□□□□ -1.31
VAMP7-201ENST00000262640 ATP5EP56381 51 aaPredicted RBP6.89□□□□□ -1.31
VAMP7-201ENST00000262640 SPANXA2-OT1Q8N9U9 137 aa6.89□□□□□ -1.31
VAMP7-201ENST00000262640 LPAP08519 4548 aa6.86□□□□□ -1.31
VAMP7-201ENST00000262640 SPINK7P58062 85 aa6.85□□□□□ -1.31
VAMP7-201ENST00000262640 HRES1P13985 223 aa6.84□□□□□ -1.31
VAMP7-201ENST00000262640 HERC1Q15751 4861 aa6.83□□□□□ -1.32
VAMP7-201ENST00000262640 LRP2P98164 4655 aa6.83□□□□□ -1.32
VAMP7-201ENST00000262640 SEC61BP60468 96 aaKnown RBP6.81□□□□□ -1.32
VAMP7-201ENST00000262640 HMCN2Q8NDA2 5059 aa6.79□□□□□ -1.32
VAMP7-201ENST00000262640 SERP1Q9Y6X1 66 aa6.75□□□□□ -1.33
VAMP7-201ENST00000262640 C4orf26Q17RF5 130 aa6.74□□□□□ -1.33
VAMP7-201ENST00000262640 DMAC1Q96GE9 116 aa6.74□□□□□ -1.33
VAMP7-201ENST00000262640 RPS28P62857 69 aaKnown RBP6.72□□□□□ -1.33
VAMP7-201ENST00000262640 MUC17Q685J3 4493 aa6.71□□□□□ -1.33
VAMP7-201ENST00000262640 ACYP2P14621 99 aa6.71□□□□□ -1.34
VAMP7-201ENST00000262640 A8MUN3 132 aa6.7□□□□□ -1.34
VAMP7-201ENST00000262640 COX6B2Q6YFQ2 88 aa6.69□□□□□ -1.34
VAMP7-201ENST00000262640 COA5Q86WW8 74 aa6.68□□□□□ -1.34
VAMP7-201ENST00000262640 KRTAP3-1Q9BYR8 98 aa6.65□□□□□ -1.35
VAMP7-201ENST00000262640 MPLKIPQ8TAP9 179 aa6.63□□□□□ -1.35
VAMP7-201ENST00000262640 KRTAP4-1Q9BYQ7 146 aa6.62□□□□□ -1.35
VAMP7-201ENST00000262640 RBM12B-AS1Q9P1G2 102 aa6.61□□□□□ -1.35
VAMP7-201ENST00000262640 CHKB-CPT1BH3BT56 60 aa6.6□□□□□ -1.35
VAMP7-201ENST00000262640 SMIM26A0A096LP01 95 aa6.57□□□□□ -1.36
VAMP7-201ENST00000262640 H1FX-AS1Q4G0G2 97 aa6.54□□□□□ -1.36
VAMP7-201ENST00000262640 SPTSSBQ8NFR3 76 aa6.49□□□□□ -1.37
VAMP7-201ENST00000262640 S4R3F8 94 aa6.48□□□□□ -1.37
VAMP7-201ENST00000262640 LCA10Q71F78 164 aa6.45□□□□□ -1.38
VAMP7-201ENST00000262640 Q1T7F1 81 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms