RNA–Protein interactions for RNA: ENST00000262134.9

LPCAT2-201, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT2, Length 5,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-201ENST00000262134 UTP20O75691 2785 aaKnown RBP7.6□□□□□ -1.19
LPCAT2-201ENST00000262134 KRTAP25-1Q3LHN0 102 aa7.59□□□□□ -1.19
LPCAT2-201ENST00000262134 KRTAP7-1Q8IUC3 87 aa7.59□□□□□ -1.19
LPCAT2-201ENST00000262134 KRTAP11-1Q8IUC1 163 aa7.58□□□□□ -1.2
LPCAT2-201ENST00000262134 Q5VSD8 79 aa7.56□□□□□ -1.2
LPCAT2-201ENST00000262134 SPTBN5Q9NRC6 3674 aaKnown RBP7.56□□□□□ -1.2
LPCAT2-201ENST00000262134 HIVEP1P15822 2718 aa7.55□□□□□ -1.2
LPCAT2-201ENST00000262134 KRTAP10-1P60331 282 aa7.54□□□□□ -1.2
LPCAT2-201ENST00000262134 CELSR2Q9HCU4 2923 aa7.52□□□□□ -1.21
LPCAT2-201ENST00000262134 MYO15AQ9UKN7 3530 aa7.51□□□□□ -1.21
LPCAT2-201ENST00000262134 ITPR2Q14571 2701 aa7.5□□□□□ -1.21
LPCAT2-201ENST00000262134 ZANQ9Y493 2812 aa7.5□□□□□ -1.21
LPCAT2-201ENST00000262134 USP34Q70CQ2 3546 aa7.49□□□□□ -1.21
LPCAT2-201ENST00000262134 LOC400499M0QZD8 3231 aa7.48□□□□□ -1.21
LPCAT2-201ENST00000262134 KRTAP10-2P60368 255 aa7.47□□□□□ -1.21
LPCAT2-201ENST00000262134 C20orf166-AS1Q96NR2 134 aa7.46□□□□□ -1.22
LPCAT2-201ENST00000262134 DMXL1Q9Y485 3027 aa7.44□□□□□ -1.22
LPCAT2-201ENST00000262134 NDUFAF8A1L188 74 aa7.43□□□□□ -1.22
LPCAT2-201ENST00000262134 RPS29P62273 56 aaKnown RBP7.42□□□□□ -1.22
LPCAT2-201ENST00000262134 TNRC18O15417 2968 aaPredicted RBP7.42□□□□□ -1.22
LPCAT2-201ENST00000262134 NIPBLQ6KC79 2804 aaeCLIP7.4□□□□□ -1.22
LPCAT2-201ENST00000262134 A8MUU9 505 aa7.39□□□□□ -1.23
LPCAT2-201ENST00000262134 HRNRQ86YZ3 2850 aaPredicted RBP7.39□□□□□ -1.23
LPCAT2-201ENST00000262134 DCHS2Q6V1P9 2916 aa7.38□□□□□ -1.23
LPCAT2-201ENST00000262134 FBN2P35556 2912 aa7.37□□□□□ -1.23
LPCAT2-201ENST00000262134 KRTAP13-1Q8IUC0 172 aa7.36□□□□□ -1.23
LPCAT2-201ENST00000262134 Q6ZRN7 208 aaPredicted RBP7.33□□□□□ -1.24
LPCAT2-201ENST00000262134 NF1P21359 2839 aa7.32□□□□□ -1.24
LPCAT2-201ENST00000262134 WDFY3Q8IZQ1 3526 aa7.31□□□□□ -1.24
LPCAT2-201ENST00000262134 TNP1P09430 55 aa7.28□□□□□ -1.24
LPCAT2-201ENST00000262134 KRTAP13-2Q52LG2 175 aa7.27□□□□□ -1.25
LPCAT2-201ENST00000262134 KMT2BQ9UMN6 2715 aaPredicted RBP7.26□□□□□ -1.25
LPCAT2-201ENST00000262134 DCHS1Q96JQ0 3298 aa7.25□□□□□ -1.25
LPCAT2-201ENST00000262134 CRYBG3Q68DQ2 2970 aa7.23□□□□□ -1.25
LPCAT2-201ENST00000262134 C10orf95Q9H7T3 257 aa7.21□□□□□ -1.25
LPCAT2-201ENST00000262134 PP632Q6XCG6 107 aa7.17□□□□□ -1.26
LPCAT2-201ENST00000262134 MUC3AQ02505 3323 aa7.15□□□□□ -1.26
LPCAT2-201ENST00000262134 DMDP11532 3685 aa7.14□□□□□ -1.27
LPCAT2-201ENST00000262134 MXRA5Q9NR99 2828 aa7.13□□□□□ -1.27
LPCAT2-201ENST00000262134 ZFHX4Q86UP3 3567 aa7.13□□□□□ -1.27
LPCAT2-201ENST00000262134 RELNP78509 3460 aa7.12□□□□□ -1.27
LPCAT2-201ENST00000262134 ASPMQ8IZT6 3477 aa7.07□□□□□ -1.28
LPCAT2-201ENST00000262134 TENM4Q6N022 2769 aa7.06□□□□□ -1.28
LPCAT2-201ENST00000262134 CSMD1Q96PZ7 3565 aa7.04□□□□□ -1.28
LPCAT2-201ENST00000262134 CELSR1Q9NYQ6 3014 aa7.01□□□□□ -1.29
LPCAT2-201ENST00000262134 H0YAA0 97 aa7□□□□□ -1.29
LPCAT2-201ENST00000262134 P0C880 135 aa6.98□□□□□ -1.29
LPCAT2-201ENST00000262134 TENM3Q9P273 2699 aa6.97□□□□□ -1.29
LPCAT2-201ENST00000262134 LAMA5O15230 3695 aa6.96□□□□□ -1.29
LPCAT2-201ENST00000262134 TGP01266 2768 aa6.95□□□□□ -1.3
LPCAT2-201ENST00000262134 KRTAP21-3Q3LHN1 58 aa6.92□□□□□ -1.3
LPCAT2-201ENST00000262134 KRTAP10-8P60410 259 aa6.92□□□□□ -1.3
LPCAT2-201ENST00000262134 SMG1Q96Q15 3661 aaKnown RBP6.92□□□□□ -1.3
LPCAT2-201ENST00000262134 KRTAP1-4P0C5Y4 121 aa6.91□□□□□ -1.3
LPCAT2-201ENST00000262134 PDZD2O15018 2839 aa6.86□□□□□ -1.31
LPCAT2-201ENST00000262134 TENM1Q9UKZ4 2725 aa6.85□□□□□ -1.31
LPCAT2-201ENST00000262134 KRTAP13-3Q3SY46 172 aa6.82□□□□□ -1.32
LPCAT2-201ENST00000262134 XP32Q5T750 250 aa6.82□□□□□ -1.32
LPCAT2-201ENST00000262134 SVEP1Q4LDE5 3571 aa6.79□□□□□ -1.32
LPCAT2-201ENST00000262134 CUBNO60494 3623 aa6.77□□□□□ -1.33
LPCAT2-201ENST00000262134 A0A1B0GVY2 172 aa6.72□□□□□ -1.33
LPCAT2-201ENST00000262134 PRO2289Q9P1D8 64 aa6.72□□□□□ -1.33
LPCAT2-201ENST00000262134 PKD1L1Q8TDX9 2849 aa6.71□□□□□ -1.34
LPCAT2-201ENST00000262134 VWFP04275 2813 aa6.7□□□□□ -1.34
LPCAT2-201ENST00000262134 TPRXLQ17RH7 258 aa6.68□□□□□ -1.34
LPCAT2-201ENST00000262134 FBN1P35555 2871 aaKnown RBP6.68□□□□□ -1.34
LPCAT2-201ENST00000262134 TENM2Q9NT68 2774 aa6.66□□□□□ -1.34
LPCAT2-201ENST00000262134 KRTAP10-10P60014 251 aa6.64□□□□□ -1.35
LPCAT2-201ENST00000262134 SPENQ96T58 3664 aaKnown RBP6.57□□□□□ -1.36
LPCAT2-201ENST00000262134 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
LPCAT2-201ENST00000262134 NBPF19A0A087WUL8 3843 aa6.5□□□□□ -1.37
LPCAT2-201ENST00000262134 SRRM2Q9UQ35 2752 aaKnown RBP6.48□□□□□ -1.37
LPCAT2-201ENST00000262134 FBN3Q75N90 2809 aa6.47□□□□□ -1.37
LPCAT2-201ENST00000262134 KRTAP3-1Q9BYR8 98 aa6.46□□□□□ -1.37
LPCAT2-201ENST00000262134 KRTAP13-4Q3LI77 160 aa6.45□□□□□ -1.38
LPCAT2-201ENST00000262134 CSMD2Q7Z408 3487 aa6.43□□□□□ -1.38
LPCAT2-201ENST00000262134 OTOGQ6ZRI0 2925 aa6.43□□□□□ -1.38
LPCAT2-201ENST00000262134 BSNQ9UPA5 3926 aa6.42□□□□□ -1.38
LPCAT2-201ENST00000262134 KRTAP12-1P59990 96 aa6.38□□□□□ -1.39
LPCAT2-201ENST00000262134 ZFHX3Q15911 3703 aa6.37□□□□□ -1.39
LPCAT2-201ENST00000262134 MEGF8Q7Z7M0 2845 aa6.37□□□□□ -1.39
LPCAT2-201ENST00000262134 TRRAPQ9Y4A5 3859 aa6.3□□□□□ -1.4
LPCAT2-201ENST00000262134 KRTAP10-6P60371 365 aaPredicted RBP6.29□□□□□ -1.4
LPCAT2-201ENST00000262134 COL7A1Q02388 2944 aa6.25□□□□□ -1.41
LPCAT2-201ENST00000262134 ANK3Q12955 4377 aaKnown RBP6.25□□□□□ -1.41
LPCAT2-201ENST00000262134 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
LPCAT2-201ENST00000262134 VPS13CQ709C8 3753 aa6.17□□□□□ -1.42
LPCAT2-201ENST00000262134 INE1O15225 51 aa6.16□□□□□ -1.42
LPCAT2-201ENST00000262134 KRTAP3-2Q9BYR7 98 aa6.08□□□□□ -1.44
LPCAT2-201ENST00000262134 KRTAP3-3Q9BYR6 98 aa6.05□□□□□ -1.44
LPCAT2-201ENST00000262134 CSMD3Q7Z407 3707 aa6□□□□□ -1.45
LPCAT2-201ENST00000262134 HUWE1Q7Z6Z7 4374 aaKnown RBP5.91□□□□□ -1.46
LPCAT2-201ENST00000262134 ZNF469Q96JG9 3925 aaPredicted RBP5.88□□□□□ -1.47
LPCAT2-201ENST00000262134 KRTAP10-12P60413 245 aa5.82□□□□□ -1.48
LPCAT2-201ENST00000262134 MT1HL1P0DM35 61 aa5.8□□□□□ -1.48
LPCAT2-201ENST00000262134 KRTAP10-4P60372 401 aaPredicted RBP5.78□□□□□ -1.48
LPCAT2-201ENST00000262134 AKAP9Q99996 3911 aa5.77□□□□□ -1.49
LPCAT2-201ENST00000262134 KRTAP23-1A1A580 65 aa5.74□□□□□ -1.49
LPCAT2-201ENST00000262134 CRCT1Q9UGL9 99 aa5.73□□□□□ -1.49
LPCAT2-201ENST00000262134 KRTAP12-3P60328 96 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms