RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 A8MUU9 505 aa6.91□□□□□ -1.3
SPG11-201ENST00000261866 A0A1B0GVY2 172 aa6.87□□□□□ -1.31
SPG11-201ENST00000261866 ITPR1Q14643 2758 aa6.84□□□□□ -1.31
SPG11-201ENST00000261866 KRTAP29-1A8MX34 341 aaPredicted RBP6.84□□□□□ -1.31
SPG11-201ENST00000261866 ADGRG4Q8IZF6 3080 aa6.84□□□□□ -1.31
SPG11-201ENST00000261866 C10orf95Q9H7T3 257 aa6.84□□□□□ -1.32
SPG11-201ENST00000261866 STAB2Q8WWQ8 2551 aa6.83□□□□□ -1.32
SPG11-201ENST00000261866 ASH1LQ9NR48 2969 aaKnown RBP6.8□□□□□ -1.32
SPG11-201ENST00000261866 UTP20O75691 2785 aaKnown RBP6.79□□□□□ -1.32
SPG11-201ENST00000261866 HIVEP1P15822 2718 aa6.78□□□□□ -1.32
SPG11-201ENST00000261866 TNRC18O15417 2968 aaPredicted RBP6.78□□□□□ -1.32
SPG11-201ENST00000261866 KRTAP16-1A8MUX0 517 aa6.76□□□□□ -1.33
SPG11-201ENST00000261866 NSD1Q96L73 2696 aaPredicted RBP6.76□□□□□ -1.33
SPG11-201ENST00000261866 NDUFAF8A1L188 74 aa6.75□□□□□ -1.33
SPG11-201ENST00000261866 ASPMQ8IZT6 3477 aa6.74□□□□□ -1.33
SPG11-201ENST00000261866 NBEAQ8NFP9 2946 aa6.73□□□□□ -1.33
SPG11-201ENST00000261866 DMXL1Q9Y485 3027 aa6.72□□□□□ -1.33
SPG11-201ENST00000261866 KRTAP13-1Q8IUC0 172 aa6.71□□□□□ -1.33
SPG11-201ENST00000261866 KRTAP10-8P60410 259 aa6.71□□□□□ -1.34
SPG11-201ENST00000261866 ZZEF1O43149 2961 aa6.7□□□□□ -1.34
SPG11-201ENST00000261866 WDFY3Q8IZQ1 3526 aa6.69□□□□□ -1.34
SPG11-201ENST00000261866 RPS29P62273 56 aaKnown RBP6.69□□□□□ -1.34
SPG11-201ENST00000261866 APCP25054 2843 aa6.68□□□□□ -1.34
SPG11-201ENST00000261866 FLNCQ14315 2725 aa6.67□□□□□ -1.34
SPG11-201ENST00000261866 ASB16-AS1Q495Z4 193 aa6.67□□□□□ -1.34
SPG11-201ENST00000261866 KRTAP25-1Q3LHN0 102 aa6.66□□□□□ -1.34
SPG11-201ENST00000261866 TNP1P09430 55 aa6.64□□□□□ -1.35
SPG11-201ENST00000261866 KRTAP21-3Q3LHN1 58 aa6.63□□□□□ -1.35
SPG11-201ENST00000261866 LOC400499M0QZD8 3231 aa6.63□□□□□ -1.35
SPG11-201ENST00000261866 KMT2BQ9UMN6 2715 aaPredicted RBP6.59□□□□□ -1.35
SPG11-201ENST00000261866 TENM4Q6N022 2769 aa6.59□□□□□ -1.35
SPG11-201ENST00000261866 CELSR2Q9HCU4 2923 aa6.59□□□□□ -1.36
SPG11-201ENST00000261866 DCHS1Q96JQ0 3298 aa6.58□□□□□ -1.36
SPG11-201ENST00000261866 RELNP78509 3460 aa6.57□□□□□ -1.36
SPG11-201ENST00000261866 XP32Q5T750 250 aa6.56□□□□□ -1.36
SPG11-201ENST00000261866 ZFHX4Q86UP3 3567 aa6.55□□□□□ -1.36
SPG11-201ENST00000261866 NBPF19A0A087WUL8 3843 aa6.52□□□□□ -1.37
SPG11-201ENST00000261866 KRTAP1-4P0C5Y4 121 aa6.51□□□□□ -1.37
SPG11-201ENST00000261866 DCHS2Q6V1P9 2916 aa6.5□□□□□ -1.37
SPG11-201ENST00000261866 KRTAP10-10P60014 251 aa6.49□□□□□ -1.37
SPG11-201ENST00000261866 LAMA5O15230 3695 aa6.48□□□□□ -1.37
SPG11-201ENST00000261866 A6NN06 94 aa6.45□□□□□ -1.38
SPG11-201ENST00000261866 ZANQ9Y493 2812 aa6.41□□□□□ -1.38
SPG11-201ENST00000261866 HRNRQ86YZ3 2850 aaPredicted RBP6.4□□□□□ -1.38
SPG11-201ENST00000261866 DMDP11532 3685 aa6.4□□□□□ -1.39
SPG11-201ENST00000261866 FBN2P35556 2912 aa6.37□□□□□ -1.39
SPG11-201ENST00000261866 CSMD1Q96PZ7 3565 aa6.37□□□□□ -1.39
SPG11-201ENST00000261866 TENM2Q9NT68 2774 aa6.37□□□□□ -1.39
SPG11-201ENST00000261866 NF1P21359 2839 aa6.33□□□□□ -1.4
SPG11-201ENST00000261866 P0C880 135 aa6.32□□□□□ -1.4
SPG11-201ENST00000261866 TPRXLQ17RH7 258 aa6.32□□□□□ -1.4
SPG11-201ENST00000261866 NIPBLQ6KC79 2804 aaeCLIP6.31□□□□□ -1.4
SPG11-201ENST00000261866 CELSR1Q9NYQ6 3014 aa6.3□□□□□ -1.4
SPG11-201ENST00000261866 TENM1Q9UKZ4 2725 aa6.28□□□□□ -1.4
SPG11-201ENST00000261866 KRTAP13-3Q3SY46 172 aa6.27□□□□□ -1.41
SPG11-201ENST00000261866 SMG1Q96Q15 3661 aaKnown RBP6.23□□□□□ -1.41
SPG11-201ENST00000261866 H0YAA0 97 aa6.22□□□□□ -1.41
SPG11-201ENST00000261866 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
SPG11-201ENST00000261866 ZFHX3Q15911 3703 aa6.19□□□□□ -1.42
SPG11-201ENST00000261866 PKD1L1Q8TDX9 2849 aa6.17□□□□□ -1.42
SPG11-201ENST00000261866 SVEP1Q4LDE5 3571 aa6.17□□□□□ -1.42
SPG11-201ENST00000261866 VWFP04275 2813 aa6.13□□□□□ -1.43
SPG11-201ENST00000261866 TENM3Q9P273 2699 aa6.13□□□□□ -1.43
SPG11-201ENST00000261866 PP632Q6XCG6 107 aa6.1□□□□□ -1.43
SPG11-201ENST00000261866 CSMD2Q7Z408 3487 aa6.1□□□□□ -1.43
SPG11-201ENST00000261866 SPENQ96T58 3664 aaKnown RBP6.1□□□□□ -1.43
SPG11-201ENST00000261866 CUBNO60494 3623 aa6.09□□□□□ -1.43
SPG11-201ENST00000261866 MUC3AQ02505 3323 aa6.06□□□□□ -1.44
SPG11-201ENST00000261866 MXRA5Q9NR99 2828 aa6.04□□□□□ -1.44
SPG11-201ENST00000261866 CRCT1Q9UGL9 99 aa6.03□□□□□ -1.44
SPG11-201ENST00000261866 ANK3Q12955 4377 aaKnown RBP6.02□□□□□ -1.45
SPG11-201ENST00000261866 TGP01266 2768 aa6.01□□□□□ -1.45
SPG11-201ENST00000261866 KRTAP12-2P59991 146 aa5.98□□□□□ -1.45
SPG11-201ENST00000261866 PDZD2O15018 2839 aa5.96□□□□□ -1.46
SPG11-201ENST00000261866 FBN1P35555 2871 aaKnown RBP5.89□□□□□ -1.47
SPG11-201ENST00000261866 TRRAPQ9Y4A5 3859 aa5.85□□□□□ -1.47
SPG11-201ENST00000261866 KRTAP15-1Q3LI76 137 aa5.84□□□□□ -1.47
SPG11-201ENST00000261866 OTOGQ6ZRI0 2925 aa5.83□□□□□ -1.48
SPG11-201ENST00000261866 KRTAP4-5Q9BYR2 181 aa5.8□□□□□ -1.48
SPG11-201ENST00000261866 BSNQ9UPA5 3926 aa5.8□□□□□ -1.48
SPG11-201ENST00000261866 KRTAP3-1Q9BYR8 98 aa5.79□□□□□ -1.48
SPG11-201ENST00000261866 KRTAP12-1P59990 96 aa5.75□□□□□ -1.49
SPG11-201ENST00000261866 VPS13CQ709C8 3753 aa5.73□□□□□ -1.49
SPG11-201ENST00000261866 HUWE1Q7Z6Z7 4374 aaKnown RBP5.73□□□□□ -1.49
SPG11-201ENST00000261866 KRTAP13-4Q3LI77 160 aa5.72□□□□□ -1.49
SPG11-201ENST00000261866 SRRM2Q9UQ35 2752 aaKnown RBP5.7□□□□□ -1.5
SPG11-201ENST00000261866 MT1HL1P0DM35 61 aa5.65□□□□□ -1.5
SPG11-201ENST00000261866 CSMD3Q7Z407 3707 aa5.62□□□□□ -1.51
SPG11-201ENST00000261866 FBN3Q75N90 2809 aa5.62□□□□□ -1.51
SPG11-201ENST00000261866 MEGF8Q7Z7M0 2845 aa5.56□□□□□ -1.52
SPG11-201ENST00000261866 KRTAP10-6P60371 365 aaPredicted RBP5.53□□□□□ -1.52
SPG11-201ENST00000261866 COL7A1Q02388 2944 aa5.52□□□□□ -1.53
SPG11-201ENST00000261866 ALMS1Q8TCU4 4167 aa5.5□□□□□ -1.53
SPG11-201ENST00000261866 AKAP9Q99996 3911 aa5.43□□□□□ -1.54
SPG11-201ENST00000261866 KRTAP10-12P60413 245 aa5.43□□□□□ -1.54
SPG11-201ENST00000261866 KRTAP10-4P60372 401 aaPredicted RBP5.41□□□□□ -1.54
SPG11-201ENST00000261866 ZNF469Q96JG9 3925 aaPredicted RBP5.4□□□□□ -1.54
SPG11-201ENST00000261866 KRTAP3-3Q9BYR6 98 aa5.39□□□□□ -1.55
SPG11-201ENST00000261866 LORP23490 312 aaPredicted RBP5.35□□□□□ -1.55
SPG11-201ENST00000261866 DNAH9Q9NYC9 4486 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms