RNA–Protein interactions for RNA: ENST00000261349.8

LRP6-201, Transcript of LDL receptor related protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP6, Length 10,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-201ENST00000261349 ASPMQ8IZT6 3477 aa2.81□□□□□ -1.96
LRP6-201ENST00000261349 CFAP47Q6ZTR5 3102 aa2.81□□□□□ -1.96
LRP6-201ENST00000261349 ZZEF1O43149 2961 aa2.8□□□□□ -1.96
LRP6-201ENST00000261349 ZFHX4Q86UP3 3567 aa2.8□□□□□ -1.96
LRP6-201ENST00000261349 C20orf166-AS1Q96NR2 134 aa2.8□□□□□ -1.96
LRP6-201ENST00000261349 STAB2Q8WWQ8 2551 aa2.79□□□□□ -1.96
LRP6-201ENST00000261349 M0QZ58 72 aa2.79□□□□□ -1.96
LRP6-201ENST00000261349 NIPBLQ6KC79 2804 aaeCLIP2.79□□□□□ -1.96
LRP6-201ENST00000261349 BOD1L1Q8NFC6 3051 aa2.78□□□□□ -1.96
LRP6-201ENST00000261349 DMDP11532 3685 aa2.78□□□□□ -1.96
LRP6-201ENST00000261349 ASH1LQ9NR48 2969 aaKnown RBP2.78□□□□□ -1.96
LRP6-201ENST00000261349 ZFHX3Q15911 3703 aa2.78□□□□□ -1.97
LRP6-201ENST00000261349 SEC61BP60468 96 aaKnown RBP2.78□□□□□ -1.97
LRP6-201ENST00000261349 REV3LO60673 3130 aa2.77□□□□□ -1.97
LRP6-201ENST00000261349 RPL37P61927 97 aaKnown RBP2.77□□□□□ -1.97
LRP6-201ENST00000261349 KRTAP13-1Q8IUC0 172 aa2.77□□□□□ -1.97
LRP6-201ENST00000261349 H0YAA0 97 aa2.76□□□□□ -1.97
LRP6-201ENST00000261349 TENM3Q9P273 2699 aa2.76□□□□□ -1.97
LRP6-201ENST00000261349 NF1P21359 2839 aa2.75□□□□□ -1.97
LRP6-201ENST00000261349 ATMQ13315 3056 aa2.75□□□□□ -1.97
LRP6-201ENST00000261349 MXRA5Q9NR99 2828 aa2.74□□□□□ -1.97
LRP6-201ENST00000261349 DMBT1Q9UGM3 2413 aaPredicted RBP2.74□□□□□ -1.97
LRP6-201ENST00000261349 C10orf95Q9H7T3 257 aa2.73□□□□□ -1.97
LRP6-201ENST00000261349 DCHS1Q96JQ0 3298 aa2.72□□□□□ -1.97
LRP6-201ENST00000261349 FBN2P35556 2912 aa2.72□□□□□ -1.97
LRP6-201ENST00000261349 TNRC18O15417 2968 aaPredicted RBP2.72□□□□□ -1.97
LRP6-201ENST00000261349 ADGRG4Q8IZF6 3080 aa2.71□□□□□ -1.97
LRP6-201ENST00000261349 LAMA5O15230 3695 aa2.71□□□□□ -1.98
LRP6-201ENST00000261349 DCHS2Q6V1P9 2916 aa2.71□□□□□ -1.98
LRP6-201ENST00000261349 KRTAP13-3Q3SY46 172 aa2.71□□□□□ -1.98
LRP6-201ENST00000261349 P0C880 135 aa2.71□□□□□ -1.98
LRP6-201ENST00000261349 CSMD1Q96PZ7 3565 aa2.7□□□□□ -1.98
LRP6-201ENST00000261349 ITPR2Q14571 2701 aa2.7□□□□□ -1.98
LRP6-201ENST00000261349 DMXL2Q8TDJ6 3036 aa2.69□□□□□ -1.98
LRP6-201ENST00000261349 SMG1Q96Q15 3661 aaKnown RBP2.68□□□□□ -1.98
LRP6-201ENST00000261349 COL12A1Q99715 3063 aa2.68□□□□□ -1.98
LRP6-201ENST00000261349 KRTAP13-2Q52LG2 175 aa2.68□□□□□ -1.98
LRP6-201ENST00000261349 CELSR2Q9HCU4 2923 aa2.68□□□□□ -1.98
LRP6-201ENST00000261349 TGP01266 2768 aa2.67□□□□□ -1.98
LRP6-201ENST00000261349 TENM1Q9UKZ4 2725 aa2.67□□□□□ -1.98
LRP6-201ENST00000261349 LOC400499M0QZD8 3231 aa2.66□□□□□ -1.98
LRP6-201ENST00000261349 Q6ZRN7 208 aaPredicted RBP2.65□□□□□ -1.98
LRP6-201ENST00000261349 SVEP1Q4LDE5 3571 aa2.65□□□□□ -1.99
LRP6-201ENST00000261349 VWFP04275 2813 aa2.65□□□□□ -1.99
LRP6-201ENST00000261349 RELNP78509 3460 aa2.64□□□□□ -1.99
LRP6-201ENST00000261349 CUBNO60494 3623 aa2.64□□□□□ -1.99
LRP6-201ENST00000261349 KMT2BQ9UMN6 2715 aaPredicted RBP2.63□□□□□ -1.99
LRP6-201ENST00000261349 TPRXLQ17RH7 258 aa2.63□□□□□ -1.99
LRP6-201ENST00000261349 TENM4Q6N022 2769 aa2.63□□□□□ -1.99
LRP6-201ENST00000261349 SRRM2Q9UQ35 2752 aaKnown RBP2.63□□□□□ -1.99
LRP6-201ENST00000261349 KRTAP10-2P60368 255 aa2.61□□□□□ -1.99
LRP6-201ENST00000261349 DMXL1Q9Y485 3027 aa2.6□□□□□ -1.99
LRP6-201ENST00000261349 TNP1P09430 55 aa2.6□□□□□ -1.99
LRP6-201ENST00000261349 SPENQ96T58 3664 aaKnown RBP2.6□□□□□ -1.99
LRP6-201ENST00000261349 KRTAP10-1P60331 282 aa2.59□□□□□ -1.99
LRP6-201ENST00000261349 PDZD2O15018 2839 aa2.59□□□□□ -2
LRP6-201ENST00000261349 CRYBG3Q68DQ2 2970 aa2.56□□□□□ -2
LRP6-201ENST00000261349 KRTAP15-1Q3LI76 137 aa2.56□□□□□ -2
LRP6-201ENST00000261349 KRTAP10-8P60410 259 aa2.54□□□□□ -2
LRP6-201ENST00000261349 KRTAP1-4P0C5Y4 121 aa2.53□□□□□ -2
LRP6-201ENST00000261349 KRTAP12-2P59991 146 aa2.53□□□□□ -2
LRP6-201ENST00000261349 PKD1L1Q8TDX9 2849 aa2.53□□□□□ -2
LRP6-201ENST00000261349 RPS29P62273 56 aaKnown RBP2.53□□□□□ -2.01
LRP6-201ENST00000261349 MUC3AQ02505 3323 aa2.52□□□□□ -2.01
LRP6-201ENST00000261349 CELSR1Q9NYQ6 3014 aa2.52□□□□□ -2.01
LRP6-201ENST00000261349 KRTAP13-4Q3LI77 160 aa2.52□□□□□ -2.01
LRP6-201ENST00000261349 KRTAP3-1Q9BYR8 98 aa2.5□□□□□ -2.01
LRP6-201ENST00000261349 TENM2Q9NT68 2774 aa2.49□□□□□ -2.01
LRP6-201ENST00000261349 PP632Q6XCG6 107 aa2.48□□□□□ -2.01
LRP6-201ENST00000261349 PRO2289Q9P1D8 64 aa2.47□□□□□ -2.01
LRP6-201ENST00000261349 A0A1B0GVY2 172 aa2.47□□□□□ -2.01
LRP6-201ENST00000261349 CSMD2Q7Z408 3487 aa2.46□□□□□ -2.02
LRP6-201ENST00000261349 MEGF8Q7Z7M0 2845 aa2.46□□□□□ -2.02
LRP6-201ENST00000261349 FBN1P35555 2871 aaKnown RBP2.46□□□□□ -2.02
LRP6-201ENST00000261349 KRTAP10-6P60371 365 aaPredicted RBP2.45□□□□□ -2.02
LRP6-201ENST00000261349 NBPF19A0A087WUL8 3843 aa2.44□□□□□ -2.02
LRP6-201ENST00000261349 KRTAP12-1P59990 96 aa2.44□□□□□ -2.02
LRP6-201ENST00000261349 VPS13CQ709C8 3753 aa2.43□□□□□ -2.02
LRP6-201ENST00000261349 AKAP9Q99996 3911 aa2.43□□□□□ -2.02
LRP6-201ENST00000261349 KRTAP10-10P60014 251 aa2.42□□□□□ -2.02
LRP6-201ENST00000261349 XP32Q5T750 250 aa2.41□□□□□ -2.02
LRP6-201ENST00000261349 OTOGQ6ZRI0 2925 aa2.39□□□□□ -2.03
LRP6-201ENST00000261349 KRTAP3-2Q9BYR7 98 aa2.39□□□□□ -2.03
LRP6-201ENST00000261349 KRTAP21-3Q3LHN1 58 aa2.37□□□□□ -2.03
LRP6-201ENST00000261349 ALMS1Q8TCU4 4167 aa2.36□□□□□ -2.03
LRP6-201ENST00000261349 FBN3Q75N90 2809 aa2.36□□□□□ -2.03
LRP6-201ENST00000261349 KRTAP3-3Q9BYR6 98 aa2.34□□□□□ -2.03
LRP6-201ENST00000261349 CSMD3Q7Z407 3707 aa2.31□□□□□ -2.04
LRP6-201ENST00000261349 TRRAPQ9Y4A5 3859 aa2.3□□□□□ -2.04
LRP6-201ENST00000261349 BSNQ9UPA5 3926 aa2.28□□□□□ -2.04
LRP6-201ENST00000261349 COL7A1Q02388 2944 aa2.27□□□□□ -2.05
LRP6-201ENST00000261349 CRCT1Q9UGL9 99 aa2.24□□□□□ -2.05
LRP6-201ENST00000261349 INE1O15225 51 aa2.21□□□□□ -2.06
LRP6-201ENST00000261349 ANK3Q12955 4377 aaKnown RBP2.19□□□□□ -2.06
LRP6-201ENST00000261349 ZNF469Q96JG9 3925 aaPredicted RBP2.16□□□□□ -2.06
LRP6-201ENST00000261349 LORP23490 312 aaPredicted RBP2.15□□□□□ -2.06
LRP6-201ENST00000261349 KRTAP10-4P60372 401 aaPredicted RBP2.13□□□□□ -2.07
LRP6-201ENST00000261349 HECTD4Q9Y4D8 3996 aa2.13□□□□□ -2.07
LRP6-201ENST00000261349 LYSTQ99698 3801 aa2.1□□□□□ -2.07
LRP6-201ENST00000261349 DNAH10Q8IVF4 4471 aa2.09□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms