RNA–Protein interactions for RNA: ENST00000261226.8

TMCC3-201, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCC3, Length 5,877 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-201ENST00000261226 SPTBN5Q9NRC6 3674 aaKnown RBP8.18□□□□□ -1.1
TMCC3-201ENST00000261226 EYSQ5T1H1 3165 aa8.15□□□□□ -1.1
TMCC3-201ENST00000261226 ZANQ9Y493 2812 aa8.15□□□□□ -1.1
TMCC3-201ENST00000261226 R4GN34 69 aa8.14□□□□□ -1.11
TMCC3-201ENST00000261226 USP34Q70CQ2 3546 aa8.11□□□□□ -1.11
TMCC3-201ENST00000261226 MYO15AQ9UKN7 3530 aa8.11□□□□□ -1.11
TMCC3-201ENST00000261226 KRTAP13-1Q8IUC0 172 aa8.09□□□□□ -1.11
TMCC3-201ENST00000261226 NIPBLQ6KC79 2804 aaeCLIP8.09□□□□□ -1.11
TMCC3-201ENST00000261226 LOC400499M0QZD8 3231 aa8.09□□□□□ -1.11
TMCC3-201ENST00000261226 KRTAP25-1Q3LHN0 102 aa8.07□□□□□ -1.12
TMCC3-201ENST00000261226 Q6ZRN7 208 aaPredicted RBP8.07□□□□□ -1.12
TMCC3-201ENST00000261226 A0A0A0MQY5 61 aa8.05□□□□□ -1.12
TMCC3-201ENST00000261226 DCHS2Q6V1P9 2916 aa8.05□□□□□ -1.12
TMCC3-201ENST00000261226 M0QZ58 72 aa8.03□□□□□ -1.12
TMCC3-201ENST00000261226 TNRC18O15417 2968 aaPredicted RBP8.03□□□□□ -1.12
TMCC3-201ENST00000261226 DMXL1Q9Y485 3027 aa8.03□□□□□ -1.12
TMCC3-201ENST00000261226 HRNRQ86YZ3 2850 aaPredicted RBP8.03□□□□□ -1.12
TMCC3-201ENST00000261226 FBN2P35556 2912 aa8□□□□□ -1.13
TMCC3-201ENST00000261226 KRTAP13-2Q52LG2 175 aa8□□□□□ -1.13
TMCC3-201ENST00000261226 Q5VSD8 79 aa7.97□□□□□ -1.13
TMCC3-201ENST00000261226 NF1P21359 2839 aa7.95□□□□□ -1.14
TMCC3-201ENST00000261226 KMT2BQ9UMN6 2715 aaPredicted RBP7.95□□□□□ -1.14
TMCC3-201ENST00000261226 M0R2T5 61 aa7.94□□□□□ -1.14
TMCC3-201ENST00000261226 CRYBG3Q68DQ2 2970 aa7.91□□□□□ -1.14
TMCC3-201ENST00000261226 SEC61BP60468 96 aaKnown RBP7.89□□□□□ -1.15
TMCC3-201ENST00000261226 WDFY3Q8IZQ1 3526 aa7.88□□□□□ -1.15
TMCC3-201ENST00000261226 RPS29P62273 56 aaKnown RBP7.87□□□□□ -1.15
TMCC3-201ENST00000261226 KRTAP16-1A8MUX0 517 aa7.85□□□□□ -1.15
TMCC3-201ENST00000261226 NDUFAF8A1L188 74 aa7.84□□□□□ -1.15
TMCC3-201ENST00000261226 DCHS1Q96JQ0 3298 aa7.81□□□□□ -1.16
TMCC3-201ENST00000261226 A8MUU9 505 aa7.79□□□□□ -1.16
TMCC3-201ENST00000261226 TENM4Q6N022 2769 aa7.77□□□□□ -1.17
TMCC3-201ENST00000261226 MXRA5Q9NR99 2828 aa7.74□□□□□ -1.17
TMCC3-201ENST00000261226 RELNP78509 3460 aa7.72□□□□□ -1.17
TMCC3-201ENST00000261226 ZFHX4Q86UP3 3567 aa7.71□□□□□ -1.18
TMCC3-201ENST00000261226 C20orf166-AS1Q96NR2 134 aa7.67□□□□□ -1.18
TMCC3-201ENST00000261226 H0YAA0 97 aa7.66□□□□□ -1.18
TMCC3-201ENST00000261226 CELSR1Q9NYQ6 3014 aa7.64□□□□□ -1.19
TMCC3-201ENST00000261226 PLAC4Q8WY50 150 aa7.63□□□□□ -1.19
TMCC3-201ENST00000261226 ASPMQ8IZT6 3477 aa7.63□□□□□ -1.19
TMCC3-201ENST00000261226 C10orf95Q9H7T3 257 aa7.62□□□□□ -1.19
TMCC3-201ENST00000261226 KRTAP1-4P0C5Y4 121 aa7.61□□□□□ -1.19
TMCC3-201ENST00000261226 TENM3Q9P273 2699 aa7.6□□□□□ -1.19
TMCC3-201ENST00000261226 CSMD1Q96PZ7 3565 aa7.59□□□□□ -1.19
TMCC3-201ENST00000261226 TGP01266 2768 aa7.58□□□□□ -1.2
TMCC3-201ENST00000261226 LAMA5O15230 3695 aa7.55□□□□□ -1.2
TMCC3-201ENST00000261226 TENM1Q9UKZ4 2725 aa7.51□□□□□ -1.21
TMCC3-201ENST00000261226 SMG1Q96Q15 3661 aaKnown RBP7.48□□□□□ -1.21
TMCC3-201ENST00000261226 PDZD2O15018 2839 aa7.46□□□□□ -1.22
TMCC3-201ENST00000261226 KRTAP13-3Q3SY46 172 aa7.46□□□□□ -1.22
TMCC3-201ENST00000261226 TNP1P09430 55 aa7.42□□□□□ -1.22
TMCC3-201ENST00000261226 XP32Q5T750 250 aa7.41□□□□□ -1.22
TMCC3-201ENST00000261226 P0C880 135 aa7.38□□□□□ -1.23
TMCC3-201ENST00000261226 DMDP11532 3685 aa7.37□□□□□ -1.23
TMCC3-201ENST00000261226 SVEP1Q4LDE5 3571 aa7.35□□□□□ -1.23
TMCC3-201ENST00000261226 PKD1L1Q8TDX9 2849 aa7.34□□□□□ -1.23
TMCC3-201ENST00000261226 TENM2Q9NT68 2774 aa7.31□□□□□ -1.24
TMCC3-201ENST00000261226 PP632Q6XCG6 107 aa7.31□□□□□ -1.24
TMCC3-201ENST00000261226 CUBNO60494 3623 aa7.3□□□□□ -1.24
TMCC3-201ENST00000261226 KRTAP10-8P60410 259 aa7.29□□□□□ -1.24
TMCC3-201ENST00000261226 VWFP04275 2813 aa7.28□□□□□ -1.24
TMCC3-201ENST00000261226 FBN1P35555 2871 aaKnown RBP7.27□□□□□ -1.25
TMCC3-201ENST00000261226 MUC3AQ02505 3323 aa7.23□□□□□ -1.25
TMCC3-201ENST00000261226 A0A1B0GVY2 172 aa7.16□□□□□ -1.26
TMCC3-201ENST00000261226 KRTAP12-2P59991 146 aa7.14□□□□□ -1.27
TMCC3-201ENST00000261226 TPRXLQ17RH7 258 aa7.12□□□□□ -1.27
TMCC3-201ENST00000261226 NBPF19A0A087WUL8 3843 aa7.11□□□□□ -1.27
TMCC3-201ENST00000261226 KRTAP3-1Q9BYR8 98 aa7.08□□□□□ -1.28
TMCC3-201ENST00000261226 SPENQ96T58 3664 aaKnown RBP7.05□□□□□ -1.28
TMCC3-201ENST00000261226 FBN3Q75N90 2809 aa7.04□□□□□ -1.28
TMCC3-201ENST00000261226 SRRM2Q9UQ35 2752 aaKnown RBP7.03□□□□□ -1.28
TMCC3-201ENST00000261226 KRTAP21-3Q3LHN1 58 aa7.01□□□□□ -1.29
TMCC3-201ENST00000261226 OTOGQ6ZRI0 2925 aa7□□□□□ -1.29
TMCC3-201ENST00000261226 KRTAP12-1P59990 96 aa7□□□□□ -1.29
TMCC3-201ENST00000261226 CSMD2Q7Z408 3487 aa6.99□□□□□ -1.29
TMCC3-201ENST00000261226 ZFHX3Q15911 3703 aa6.97□□□□□ -1.29
TMCC3-201ENST00000261226 MEGF8Q7Z7M0 2845 aa6.94□□□□□ -1.3
TMCC3-201ENST00000261226 KRTAP13-4Q3LI77 160 aa6.93□□□□□ -1.3
TMCC3-201ENST00000261226 KRTAP10-10P60014 251 aa6.88□□□□□ -1.31
TMCC3-201ENST00000261226 KRTAP10-6P60371 365 aaPredicted RBP6.88□□□□□ -1.31
TMCC3-201ENST00000261226 TRRAPQ9Y4A5 3859 aa6.87□□□□□ -1.31
TMCC3-201ENST00000261226 ANK3Q12955 4377 aaKnown RBP6.86□□□□□ -1.31
TMCC3-201ENST00000261226 COL7A1Q02388 2944 aa6.81□□□□□ -1.32
TMCC3-201ENST00000261226 BSNQ9UPA5 3926 aa6.75□□□□□ -1.33
TMCC3-201ENST00000261226 PRO2289Q9P1D8 64 aa6.7□□□□□ -1.34
TMCC3-201ENST00000261226 VPS13CQ709C8 3753 aa6.69□□□□□ -1.34
TMCC3-201ENST00000261226 KRTAP15-1Q3LI76 137 aa6.66□□□□□ -1.34
TMCC3-201ENST00000261226 KRTAP3-2Q9BYR7 98 aa6.65□□□□□ -1.35
TMCC3-201ENST00000261226 KRTAP3-3Q9BYR6 98 aa6.63□□□□□ -1.35
TMCC3-201ENST00000261226 CSMD3Q7Z407 3707 aa6.51□□□□□ -1.37
TMCC3-201ENST00000261226 HUWE1Q7Z6Z7 4374 aaKnown RBP6.48□□□□□ -1.37
TMCC3-201ENST00000261226 MT1HL1P0DM35 61 aa6.4□□□□□ -1.38
TMCC3-201ENST00000261226 KRTAP10-4P60372 401 aaPredicted RBP6.36□□□□□ -1.39
TMCC3-201ENST00000261226 AKAP9Q99996 3911 aa6.28□□□□□ -1.4
TMCC3-201ENST00000261226 ZNF469Q96JG9 3925 aaPredicted RBP6.28□□□□□ -1.4
TMCC3-201ENST00000261226 INE1O15225 51 aa6.24□□□□□ -1.41
TMCC3-201ENST00000261226 LORP23490 312 aaPredicted RBP6.2□□□□□ -1.42
TMCC3-201ENST00000261226 KRTAP10-12P60413 245 aa6.14□□□□□ -1.43
TMCC3-201ENST00000261226 DNAH9Q9NYC9 4486 aa6.12□□□□□ -1.43
TMCC3-201ENST00000261226 DNAH1Q9P2D7 4330 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms