RNA–Protein interactions for RNA: ENST00000261205.8

SYT1-201, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 4,808 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-201ENST00000261205 Q75L30 129 aa9.03□□□□□ -0.96
SYT1-201ENST00000261205 DMAC1Q96GE9 116 aa9□□□□□ -0.97
SYT1-201ENST00000261205 A0A1B0GU33 70 aa9□□□□□ -0.97
SYT1-201ENST00000261205 OTOGQ6ZRI0 2925 aa9□□□□□ -0.97
SYT1-201ENST00000261205 LINC01558Q9Y6Z2 57 aa8.99□□□□□ -0.97
SYT1-201ENST00000261205 CYSTM1Q9H1C7 97 aa8.97□□□□□ -0.97
SYT1-201ENST00000261205 LINC01554Q52M75 96 aa8.97□□□□□ -0.97
SYT1-201ENST00000261205 MUC3AQ02505 3323 aa8.96□□□□□ -0.98
SYT1-201ENST00000261205 DCHS1Q96JQ0 3298 aa8.94□□□□□ -0.98
SYT1-201ENST00000261205 CDC42SE1Q9NRR8 79 aa8.94□□□□□ -0.98
SYT1-201ENST00000261205 NOTCH2NLQ7Z3S9 236 aa8.94□□□□□ -0.98
SYT1-201ENST00000261205 CRIPTQ9P021 101 aa8.93□□□□□ -0.98
SYT1-201ENST00000261205 RELNP78509 3460 aa8.93□□□□□ -0.98
SYT1-201ENST00000261205 KRTAP1-4P0C5Y4 121 aa8.93□□□□□ -0.98
SYT1-201ENST00000261205 RPL37P61927 97 aaKnown RBP8.92□□□□□ -0.98
SYT1-201ENST00000261205 SPINT4Q6UDR6 99 aa8.92□□□□□ -0.98
SYT1-201ENST00000261205 A0A0D9SG42 100 aa8.89□□□□□ -0.99
SYT1-201ENST00000261205 TENM3Q9P273 2699 aa8.88□□□□□ -0.99
SYT1-201ENST00000261205 FLG2Q5D862 2391 aaPredicted RBP8.88□□□□□ -0.99
SYT1-201ENST00000261205 CELSR1Q9NYQ6 3014 aa8.87□□□□□ -0.99
SYT1-201ENST00000261205 A0A1B0GVY2 172 aa8.85□□□□□ -0.99
SYT1-201ENST00000261205 WDFY3Q8IZQ1 3526 aa8.85□□□□□ -0.99
SYT1-201ENST00000261205 TENM2Q9NT68 2774 aa8.84□□□□□ -0.99
SYT1-201ENST00000261205 DMDP11532 3685 aa8.84□□□□□ -0.99
SYT1-201ENST00000261205 TENM1Q9UKZ4 2725 aa8.83□□□□□ -1
SYT1-201ENST00000261205 A8MUU9 505 aa8.83□□□□□ -1
SYT1-201ENST00000261205 H1FX-AS1Q4G0G2 97 aa8.83□□□□□ -1
SYT1-201ENST00000261205 CAMK2N1Q7Z7J9 78 aa8.83□□□□□ -1
SYT1-201ENST00000261205 R4GN34 69 aa8.83□□□□□ -1
SYT1-201ENST00000261205 C20orf166-AS1Q96NR2 134 aa8.82□□□□□ -1
SYT1-201ENST00000261205 LAMA5O15230 3695 aa8.8□□□□□ -1
SYT1-201ENST00000261205 TPRXLQ17RH7 258 aa8.7□□□□□ -1.02
SYT1-201ENST00000261205 ZFHX4Q86UP3 3567 aa8.65□□□□□ -1.02
SYT1-201ENST00000261205 Q5VV11 94 aa8.65□□□□□ -1.03
SYT1-201ENST00000261205 ANK3Q12955 4377 aaKnown RBP8.63□□□□□ -1.03
SYT1-201ENST00000261205 M0QZ58 72 aa8.63□□□□□ -1.03
SYT1-201ENST00000261205 ASPMQ8IZT6 3477 aa8.63□□□□□ -1.03
SYT1-201ENST00000261205 XP32Q5T750 250 aa8.63□□□□□ -1.03
SYT1-201ENST00000261205 KTN1-AS1Q86SY8 53 aa8.63□□□□□ -1.03
SYT1-201ENST00000261205 VWFP04275 2813 aa8.62□□□□□ -1.03
SYT1-201ENST00000261205 ADM2Q7Z4H4 148 aa8.62□□□□□ -1.03
SYT1-201ENST00000261205 KRTAP10-8P60410 259 aa8.61□□□□□ -1.03
SYT1-201ENST00000261205 NBPF19A0A087WUL8 3843 aa8.6□□□□□ -1.03
SYT1-201ENST00000261205 FBN1P35555 2871 aaKnown RBP8.59□□□□□ -1.03
SYT1-201ENST00000261205 LCA10Q71F78 164 aa8.57□□□□□ -1.04
SYT1-201ENST00000261205 TGP01266 2768 aa8.54□□□□□ -1.04
SYT1-201ENST00000261205 PKD1L1Q8TDX9 2849 aa8.54□□□□□ -1.04
SYT1-201ENST00000261205 PLAC4Q8WY50 150 aa8.53□□□□□ -1.04
SYT1-201ENST00000261205 KRTAP13-3Q3SY46 172 aa8.51□□□□□ -1.05
SYT1-201ENST00000261205 BSNQ9UPA5 3926 aa8.48□□□□□ -1.05
SYT1-201ENST00000261205 KRTAP16-1A8MUX0 517 aa8.47□□□□□ -1.05
SYT1-201ENST00000261205 SMG1Q96Q15 3661 aaKnown RBP8.44□□□□□ -1.06
SYT1-201ENST00000261205 SPATA8Q6RVD6 105 aa8.4□□□□□ -1.06
SYT1-201ENST00000261205 ZFHX3Q15911 3703 aa8.4□□□□□ -1.06
SYT1-201ENST00000261205 ROMO1P60602 79 aa8.37□□□□□ -1.07
SYT1-201ENST00000261205 SPENQ96T58 3664 aaKnown RBP8.33□□□□□ -1.08
SYT1-201ENST00000261205 CSMD1Q96PZ7 3565 aa8.28□□□□□ -1.08
SYT1-201ENST00000261205 FBN3Q75N90 2809 aa8.26□□□□□ -1.09
SYT1-201ENST00000261205 LUZP6Q538Z0 58 aa8.24□□□□□ -1.09
SYT1-201ENST00000261205 CSMD2Q7Z408 3487 aa8.12□□□□□ -1.11
SYT1-201ENST00000261205 SVEP1Q4LDE5 3571 aa8.11□□□□□ -1.11
SYT1-201ENST00000261205 A8MU10 97 aa8.11□□□□□ -1.11
SYT1-201ENST00000261205 TRRAPQ9Y4A5 3859 aa8.1□□□□□ -1.11
SYT1-201ENST00000261205 PRAC1Q96KF2 57 aa8.07□□□□□ -1.12
SYT1-201ENST00000261205 MEGF8Q7Z7M0 2845 aa8.02□□□□□ -1.13
SYT1-201ENST00000261205 A6NN06 94 aa8.02□□□□□ -1.13
SYT1-201ENST00000261205 MT1HL1P0DM35 61 aa8.02□□□□□ -1.13
SYT1-201ENST00000261205 TNP1P09430 55 aa8.01□□□□□ -1.13
SYT1-201ENST00000261205 KRTAP10-10P60014 251 aa7.99□□□□□ -1.13
SYT1-201ENST00000261205 KRTAP10-4P60372 401 aaPredicted RBP7.99□□□□□ -1.13
SYT1-201ENST00000261205 HUWE1Q7Z6Z7 4374 aaKnown RBP7.97□□□□□ -1.13
SYT1-201ENST00000261205 H0YAA0 97 aa7.86□□□□□ -1.15
SYT1-201ENST00000261205 PRO2289Q9P1D8 64 aa7.85□□□□□ -1.15
SYT1-201ENST00000261205 ALMS1Q8TCU4 4167 aa7.85□□□□□ -1.15
SYT1-201ENST00000261205 KRTAP25-1Q3LHN0 102 aa7.84□□□□□ -1.15
SYT1-201ENST00000261205 PP632Q6XCG6 107 aa7.83□□□□□ -1.16
SYT1-201ENST00000261205 P0C880 135 aa7.82□□□□□ -1.16
SYT1-201ENST00000261205 COL7A1Q02388 2944 aa7.81□□□□□ -1.16
SYT1-201ENST00000261205 SRRM2Q9UQ35 2752 aaKnown RBP7.8□□□□□ -1.16
SYT1-201ENST00000261205 AKAP9Q99996 3911 aa7.78□□□□□ -1.16
SYT1-201ENST00000261205 DNAH9Q9NYC9 4486 aa7.77□□□□□ -1.17
SYT1-201ENST00000261205 ZNF469Q96JG9 3925 aaPredicted RBP7.75□□□□□ -1.17
SYT1-201ENST00000261205 CUBNO60494 3623 aa7.73□□□□□ -1.17
SYT1-201ENST00000261205 KRTAP4-5Q9BYR2 181 aa7.73□□□□□ -1.17
SYT1-201ENST00000261205 KRTAP3-1Q9BYR8 98 aa7.71□□□□□ -1.18
SYT1-201ENST00000261205 VPS13CQ709C8 3753 aa7.7□□□□□ -1.18
SYT1-201ENST00000261205 A0A0A0MQY5 61 aa7.58□□□□□ -1.2
SYT1-201ENST00000261205 DNHD1Q96M86 4753 aa7.5□□□□□ -1.21
SYT1-201ENST00000261205 DNAH11Q96DT5 4516 aa7.47□□□□□ -1.21
SYT1-201ENST00000261205 DNAH10Q8IVF4 4471 aa7.47□□□□□ -1.21
SYT1-201ENST00000261205 DNAH1Q9P2D7 4330 aa7.46□□□□□ -1.21
SYT1-201ENST00000261205 DNAH5Q8TE73 4624 aa7.44□□□□□ -1.22
SYT1-201ENST00000261205 PLECQ15149 4684 aaKnown RBP7.44□□□□□ -1.22
SYT1-201ENST00000261205 VPS13DQ5THJ4 4388 aa7.42□□□□□ -1.22
SYT1-201ENST00000261205 KRTAP10-6P60371 365 aaPredicted RBP7.4□□□□□ -1.22
SYT1-201ENST00000261205 KRTAP12-1P59990 96 aa7.4□□□□□ -1.23
SYT1-201ENST00000261205 KRTAP12-2P59991 146 aa7.38□□□□□ -1.23
SYT1-201ENST00000261205 KRTAP13-4Q3LI77 160 aa7.37□□□□□ -1.23
SYT1-201ENST00000261205 C10orf95Q9H7T3 257 aa7.36□□□□□ -1.23
SYT1-201ENST00000261205 KRTAP3-3Q9BYR6 98 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms