RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 SPINK1P00995 79 aa5.33□□□□□ -1.56
CKAP2-201ENST00000258607 MMP24-AS1A0A0U1RRL7 71 aa5.32□□□□□ -1.56
CKAP2-201ENST00000258607 BRK1Q8WUW1 75 aa5.32□□□□□ -1.56
CKAP2-201ENST00000258607 TRAV22A0A0B4J277 110 aa5.31□□□□□ -1.56
CKAP2-201ENST00000258607 A0A1B0GVX0 72 aa5.31□□□□□ -1.56
CKAP2-201ENST00000258607 FAT3Q8TDW7 4589 aa5.31□□□□□ -1.56
CKAP2-201ENST00000258607 Q96NJ1 140 aa5.3□□□□□ -1.56
CKAP2-201ENST00000258607 SACSQ9NZJ4 4579 aa5.3□□□□□ -1.56
CKAP2-201ENST00000258607 SPRR1BP22528 89 aa5.3□□□□□ -1.56
CKAP2-201ENST00000258607 KIAA1109Q2LD37 5005 aa5.29□□□□□ -1.56
CKAP2-201ENST00000258607 LRP1Q07954 4544 aaKnown RBP5.29□□□□□ -1.56
CKAP2-201ENST00000258607 IGLV8-61A0A075B6I0 122 aa5.29□□□□□ -1.56
CKAP2-201ENST00000258607 Q8N9P0 234 aaPredicted RBP5.29□□□□□ -1.56
CKAP2-201ENST00000258607 Q5W150 140 aa5.28□□□□□ -1.56
CKAP2-201ENST00000258607 MRPL34Q9BQ48 92 aaKnown RBP5.27□□□□□ -1.57
CKAP2-201ENST00000258607 DYNC1H1Q14204 4646 aaKnown RBP5.27□□□□□ -1.57
CKAP2-201ENST00000258607 LINC00313P59037 77 aa5.27□□□□□ -1.57
CKAP2-201ENST00000258607 RPS28P62857 69 aaKnown RBP5.26□□□□□ -1.57
CKAP2-201ENST00000258607 SPAG11AQ6PDA7 123 aa5.26□□□□□ -1.57
CKAP2-201ENST00000258607 SERP1Q9Y6X1 66 aa5.25□□□□□ -1.57
CKAP2-201ENST00000258607 LCE6AA0A183 80 aa5.25□□□□□ -1.57
CKAP2-201ENST00000258607 FP248Q71RG6 208 aaPredicted RBP5.25□□□□□ -1.57
CKAP2-201ENST00000258607 KRTAP29-1A8MX34 341 aaPredicted RBP5.24□□□□□ -1.57
CKAP2-201ENST00000258607 C1orf195Q5TG92 126 aa5.24□□□□□ -1.57
CKAP2-201ENST00000258607 Q5XG85 94 aa5.24□□□□□ -1.57
CKAP2-201ENST00000258607 LINC00483Q53H64 154 aa5.23□□□□□ -1.57
CKAP2-201ENST00000258607 CD164Q04900 197 aa5.23□□□□□ -1.57
CKAP2-201ENST00000258607 Q8N1X5 172 aa5.23□□□□□ -1.57
CKAP2-201ENST00000258607 LINC00304Q8N9R0 145 aa5.22□□□□□ -1.57
CKAP2-201ENST00000258607 NDUFC1O43677 76 aa5.22□□□□□ -1.57
CKAP2-201ENST00000258607 A8MUN3 132 aa5.22□□□□□ -1.57
CKAP2-201ENST00000258607 LINC00336Q6ZUF6 198 aa5.21□□□□□ -1.58
CKAP2-201ENST00000258607 APOBP04114 4563 aaKnown RBP5.21□□□□□ -1.58
CKAP2-201ENST00000258607 ALMS1Q8TCU4 4167 aa5.21□□□□□ -1.58
CKAP2-201ENST00000258607 KRTAP1-4P0C5Y4 121 aa5.21□□□□□ -1.58
CKAP2-201ENST00000258607 A0A1B0GW54 56 aa5.2□□□□□ -1.58
CKAP2-201ENST00000258607 A8MU10 97 aa5.2□□□□□ -1.58
CKAP2-201ENST00000258607 CHKB-CPT1BH3BT56 60 aa5.2□□□□□ -1.58
CKAP2-201ENST00000258607 RYR3Q15413 4870 aa5.2□□□□□ -1.58
CKAP2-201ENST00000258607 SSBP3-AS1Q7Z2R9 100 aa5.19□□□□□ -1.58
CKAP2-201ENST00000258607 PRR15LQ9BU68 103 aa5.19□□□□□ -1.58
CKAP2-201ENST00000258607 SMIM26A0A096LP01 95 aa5.19□□□□□ -1.58
CKAP2-201ENST00000258607 SPTSSBQ8NFR3 76 aa5.19□□□□□ -1.58
CKAP2-201ENST00000258607 Q6ZSA8 131 aa5.18□□□□□ -1.58
CKAP2-201ENST00000258607 PKD1P98161 4303 aa5.18□□□□□ -1.58
CKAP2-201ENST00000258607 COA5Q86WW8 74 aa5.17□□□□□ -1.58
CKAP2-201ENST00000258607 KRTAP3-3Q9BYR6 98 aa5.15□□□□□ -1.58
CKAP2-201ENST00000258607 KRTAP3-2Q9BYR7 98 aa5.15□□□□□ -1.58
CKAP2-201ENST00000258607 FAM229AH3BQW9 127 aa5.15□□□□□ -1.59
CKAP2-201ENST00000258607 Q5VSD8 79 aa5.15□□□□□ -1.59
CKAP2-201ENST00000258607 RYR1P21817 5038 aa5.15□□□□□ -1.59
CKAP2-201ENST00000258607 SEC61GP60059 68 aa5.14□□□□□ -1.59
CKAP2-201ENST00000258607 ZCCHC13Q8WW36 166 aaKnown RBP5.13□□□□□ -1.59
CKAP2-201ENST00000258607 LIMD2Q9BT23 127 aa5.13□□□□□ -1.59
CKAP2-201ENST00000258607 RYR2Q92736 4967 aa5.12□□□□□ -1.59
CKAP2-201ENST00000258607 HRES1P13985 223 aa5.12□□□□□ -1.59
CKAP2-201ENST00000258607 C7orf65Q6ZTY9 151 aa5.12□□□□□ -1.59
CKAP2-201ENST00000258607 PRO0628Q9UI54 55 aa5.12□□□□□ -1.59
CKAP2-201ENST00000258607 A6NED7 52 aa5.11□□□□□ -1.59
CKAP2-201ENST00000258607 EPPK1P58107 5090 aaKnown RBP5.11□□□□□ -1.59
CKAP2-201ENST00000258607 TP53AIP1Q9HCN2 124 aa5.1□□□□□ -1.59
CKAP2-201ENST00000258607 CYP4F30PQ9H0H9 118 aa5.08□□□□□ -1.6
CKAP2-201ENST00000258607 ATP5EP56381 51 aaPredicted RBP5.07□□□□□ -1.6
CKAP2-201ENST00000258607 A0A1B0GVY2 172 aa5.04□□□□□ -1.6
CKAP2-201ENST00000258607 KRTAP17-1Q9BYP8 105 aa5.04□□□□□ -1.6
CKAP2-201ENST00000258607 LOC101927531A0A1B0GV80 90 aa5.03□□□□□ -1.6
CKAP2-201ENST00000258607 KRTAP21-3Q3LHN1 58 aa5.03□□□□□ -1.6
CKAP2-201ENST00000258607 IGLV7-46A0A075B6I9 117 aa5.02□□□□□ -1.61
CKAP2-201ENST00000258607 C8orf87E5RJ46 101 aa5.02□□□□□ -1.61
CKAP2-201ENST00000258607 HSPG2P98160 4391 aa5.02□□□□□ -1.61
CKAP2-201ENST00000258607 KRTAP4-5Q9BYR2 181 aa5□□□□□ -1.61
CKAP2-201ENST00000258607 V9GYY9 64 aa5□□□□□ -1.61
CKAP2-201ENST00000258607 KRTAP16-1A8MUX0 517 aa4.99□□□□□ -1.61
CKAP2-201ENST00000258607 SPINK7P58062 85 aa4.98□□□□□ -1.61
CKAP2-201ENST00000258607 H3BPC8 53 aa4.98□□□□□ -1.61
CKAP2-201ENST00000258607 ACYP2P14621 99 aa4.98□□□□□ -1.61
CKAP2-201ENST00000258607 LRP2P98164 4655 aa4.97□□□□□ -1.61
CKAP2-201ENST00000258607 Q5VV11 94 aa4.96□□□□□ -1.61
CKAP2-201ENST00000258607 ASB16-AS1Q495Z4 193 aa4.96□□□□□ -1.62
CKAP2-201ENST00000258607 PMAIP1Q13794 54 aa4.95□□□□□ -1.62
CKAP2-201ENST00000258607 LPAP08519 4548 aa4.95□□□□□ -1.62
CKAP2-201ENST00000258607 ABCA13Q86UQ4 5058 aa4.95□□□□□ -1.62
CKAP2-201ENST00000258607 A0A1B0GU69 56 aa4.95□□□□□ -1.62
CKAP2-201ENST00000258607 ATP11AUNQ6ZP68 121 aa4.95□□□□□ -1.62
CKAP2-201ENST00000258607 SPANXA2-OT1Q8N9U9 137 aa4.95□□□□□ -1.62
CKAP2-201ENST00000258607 MUC2Q02817 5179 aa4.94□□□□□ -1.62
CKAP2-201ENST00000258607 KRTAP10-4P60372 401 aaPredicted RBP4.92□□□□□ -1.62
CKAP2-201ENST00000258607 J3QL48 77 aa4.91□□□□□ -1.62
CKAP2-201ENST00000258607 PKHD1L1Q86WI1 4243 aa4.9□□□□□ -1.62
CKAP2-201ENST00000258607 KRTAP13-3Q3SY46 172 aa4.9□□□□□ -1.63
CKAP2-201ENST00000258607 Q1T7F1 81 aa4.89□□□□□ -1.63
CKAP2-201ENST00000258607 LCA10Q71F78 164 aa4.87□□□□□ -1.63
CKAP2-201ENST00000258607 A0A0D9SG42 100 aa4.86□□□□□ -1.63
CKAP2-201ENST00000258607 DMAC1Q96GE9 116 aa4.85□□□□□ -1.63
CKAP2-201ENST00000258607 SPATA8Q6RVD6 105 aa4.84□□□□□ -1.64
CKAP2-201ENST00000258607 HERC2O95714 4834 aa4.83□□□□□ -1.64
CKAP2-201ENST00000258607 CRIPTQ9P021 101 aa4.83□□□□□ -1.64
CKAP2-201ENST00000258607 KRTAP10-8P60410 259 aa4.82□□□□□ -1.64
CKAP2-201ENST00000258607 HERC1Q15751 4861 aa4.8□□□□□ -1.64
CKAP2-201ENST00000258607 XP32Q5T750 250 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 403.6 ms