RNA–Protein interactions for RNA: ENST00000256509.6

CHL1-201, Transcript of cell adhesion molecule L1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHL1, Length 8,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-201ENST00000256509 LINC00472Q9H8W2 130 aa7.15□□□□□ -1.26
CHL1-201ENST00000256509 PRO2289Q9P1D8 64 aa7.15□□□□□ -1.27
CHL1-201ENST00000256509 A8MU10 97 aa7.12□□□□□ -1.27
CHL1-201ENST00000256509 KRTAP25-1Q3LHN0 102 aa7.12□□□□□ -1.27
CHL1-201ENST00000256509 KRTAP26-1Q6PEX3 210 aa7.11□□□□□ -1.27
CHL1-201ENST00000256509 ASPMQ8IZT6 3477 aa7.08□□□□□ -1.28
CHL1-201ENST00000256509 TACC2O95359 2948 aa7.06□□□□□ -1.28
CHL1-201ENST00000256509 CHD9Q3L8U1 2897 aa7.06□□□□□ -1.28
CHL1-201ENST00000256509 LRBAP50851 2863 aa7.05□□□□□ -1.28
CHL1-201ENST00000256509 SPTBN5Q9NRC6 3674 aaKnown RBP7.04□□□□□ -1.28
CHL1-201ENST00000256509 USP34Q70CQ2 3546 aa7.04□□□□□ -1.28
CHL1-201ENST00000256509 TENM1Q9UKZ4 2725 aa7.03□□□□□ -1.28
CHL1-201ENST00000256509 SPRR1AP35321 89 aa7.03□□□□□ -1.28
CHL1-201ENST00000256509 HIVEP1P15822 2718 aa7.02□□□□□ -1.28
CHL1-201ENST00000256509 TENM3Q9P273 2699 aa7.01□□□□□ -1.29
CHL1-201ENST00000256509 ADGRG4Q8IZF6 3080 aa7.01□□□□□ -1.29
CHL1-201ENST00000256509 KRTAP10-10P60014 251 aa6.99□□□□□ -1.29
CHL1-201ENST00000256509 NOTCH2NLQ7Z3S9 236 aa6.99□□□□□ -1.29
CHL1-201ENST00000256509 ZFHX4Q86UP3 3567 aa6.99□□□□□ -1.29
CHL1-201ENST00000256509 MYO15AQ9UKN7 3530 aa6.97□□□□□ -1.29
CHL1-201ENST00000256509 CYSTM1Q9H1C7 97 aa6.93□□□□□ -1.3
CHL1-201ENST00000256509 EYSQ5T1H1 3165 aa6.93□□□□□ -1.3
CHL1-201ENST00000256509 CELSR1Q9NYQ6 3014 aa6.92□□□□□ -1.3
CHL1-201ENST00000256509 CELSR2Q9HCU4 2923 aa6.92□□□□□ -1.3
CHL1-201ENST00000256509 NF1P21359 2839 aa6.92□□□□□ -1.3
CHL1-201ENST00000256509 LOC400499M0QZD8 3231 aa6.88□□□□□ -1.31
CHL1-201ENST00000256509 ITPR1Q14643 2758 aa6.86□□□□□ -1.31
CHL1-201ENST00000256509 NBPF19A0A087WUL8 3843 aa6.83□□□□□ -1.32
CHL1-201ENST00000256509 Q5XG85 94 aa6.83□□□□□ -1.32
CHL1-201ENST00000256509 WDFY3Q8IZQ1 3526 aa6.82□□□□□ -1.32
CHL1-201ENST00000256509 KRTAP11-1Q8IUC1 163 aa6.8□□□□□ -1.32
CHL1-201ENST00000256509 TENM4Q6N022 2769 aa6.8□□□□□ -1.32
CHL1-201ENST00000256509 PKD1L1Q8TDX9 2849 aa6.79□□□□□ -1.32
CHL1-201ENST00000256509 DMXL1Q9Y485 3027 aa6.79□□□□□ -1.32
CHL1-201ENST00000256509 PDZD2O15018 2839 aa6.76□□□□□ -1.33
CHL1-201ENST00000256509 VWFP04275 2813 aa6.75□□□□□ -1.33
CHL1-201ENST00000256509 KRTAP4-16G5E9R7 235 aaPredicted RBP6.74□□□□□ -1.33
CHL1-201ENST00000256509 KRTAP13-2Q52LG2 175 aa6.74□□□□□ -1.33
CHL1-201ENST00000256509 NIPBLQ6KC79 2804 aaeCLIP6.74□□□□□ -1.33
CHL1-201ENST00000256509 DCHS2Q6V1P9 2916 aa6.69□□□□□ -1.34
CHL1-201ENST00000256509 RPS29P62273 56 aaKnown RBP6.69□□□□□ -1.34
CHL1-201ENST00000256509 Q6ZRN7 208 aaPredicted RBP6.68□□□□□ -1.34
CHL1-201ENST00000256509 NBEAQ8NFP9 2946 aa6.67□□□□□ -1.34
CHL1-201ENST00000256509 KRTAP29-1A8MX34 341 aaPredicted RBP6.62□□□□□ -1.35
CHL1-201ENST00000256509 LAMA5O15230 3695 aa6.61□□□□□ -1.35
CHL1-201ENST00000256509 DCHS1Q96JQ0 3298 aa6.59□□□□□ -1.36
CHL1-201ENST00000256509 XP32Q5T750 250 aa6.58□□□□□ -1.36
CHL1-201ENST00000256509 ZANQ9Y493 2812 aa6.58□□□□□ -1.36
CHL1-201ENST00000256509 ZFHX3Q15911 3703 aa6.55□□□□□ -1.36
CHL1-201ENST00000256509 A6NN06 94 aa6.55□□□□□ -1.36
CHL1-201ENST00000256509 SRRM2Q9UQ35 2752 aaKnown RBP6.47□□□□□ -1.37
CHL1-201ENST00000256509 TENM2Q9NT68 2774 aa6.46□□□□□ -1.38
CHL1-201ENST00000256509 RELNP78509 3460 aa6.46□□□□□ -1.38
CHL1-201ENST00000256509 CRCT1Q9UGL9 99 aa6.44□□□□□ -1.38
CHL1-201ENST00000256509 KRTAP7-1Q8IUC3 87 aa6.43□□□□□ -1.38
CHL1-201ENST00000256509 TGP01266 2768 aa6.43□□□□□ -1.38
CHL1-201ENST00000256509 KRTAP21-3Q3LHN1 58 aa6.41□□□□□ -1.38
CHL1-201ENST00000256509 TPRXLQ17RH7 258 aa6.41□□□□□ -1.38
CHL1-201ENST00000256509 FBN2P35556 2912 aa6.4□□□□□ -1.39
CHL1-201ENST00000256509 CUBNO60494 3623 aa6.34□□□□□ -1.39
CHL1-201ENST00000256509 KRTAP12-2P59991 146 aa6.33□□□□□ -1.4
CHL1-201ENST00000256509 KRTAP13-1Q8IUC0 172 aa6.33□□□□□ -1.4
CHL1-201ENST00000256509 MEGF8Q7Z7M0 2845 aa6.33□□□□□ -1.4
CHL1-201ENST00000256509 CSMD1Q96PZ7 3565 aa6.33□□□□□ -1.4
CHL1-201ENST00000256509 SPENQ96T58 3664 aaKnown RBP6.28□□□□□ -1.4
CHL1-201ENST00000256509 COL7A1Q02388 2944 aa6.28□□□□□ -1.4
CHL1-201ENST00000256509 H0YAA0 97 aa6.26□□□□□ -1.41
CHL1-201ENST00000256509 SMG1Q96Q15 3661 aaKnown RBP6.25□□□□□ -1.41
CHL1-201ENST00000256509 KRTAP15-1Q3LI76 137 aa6.24□□□□□ -1.41
CHL1-201ENST00000256509 KRTAP1-4P0C5Y4 121 aa6.21□□□□□ -1.42
CHL1-201ENST00000256509 KRTAP13-3Q3SY46 172 aa6.2□□□□□ -1.42
CHL1-201ENST00000256509 INE1O15225 51 aa6.19□□□□□ -1.42
CHL1-201ENST00000256509 KRTAP10-6P60371 365 aaPredicted RBP6.19□□□□□ -1.42
CHL1-201ENST00000256509 MUC3AQ02505 3323 aa6.19□□□□□ -1.42
CHL1-201ENST00000256509 DMDP11532 3685 aa6.17□□□□□ -1.42
CHL1-201ENST00000256509 MXRA5Q9NR99 2828 aa6.08□□□□□ -1.44
CHL1-201ENST00000256509 KRTAP13-4Q3LI77 160 aa6□□□□□ -1.45
CHL1-201ENST00000256509 CSMD2Q7Z408 3487 aa6□□□□□ -1.45
CHL1-201ENST00000256509 KRTAP10-7P60409 375 aaPredicted RBP6□□□□□ -1.45
CHL1-201ENST00000256509 FBN3Q75N90 2809 aa5.95□□□□□ -1.46
CHL1-201ENST00000256509 SVEP1Q4LDE5 3571 aa5.93□□□□□ -1.46
CHL1-201ENST00000256509 CSMD3Q7Z407 3707 aa5.87□□□□□ -1.47
CHL1-201ENST00000256509 FBN1P35555 2871 aaKnown RBP5.87□□□□□ -1.47
CHL1-201ENST00000256509 LORP23490 312 aaPredicted RBP5.84□□□□□ -1.47
CHL1-201ENST00000256509 HRNRQ86YZ3 2850 aaPredicted RBP5.81□□□□□ -1.48
CHL1-201ENST00000256509 OTOGQ6ZRI0 2925 aa5.78□□□□□ -1.48
CHL1-201ENST00000256509 KRTAP12-1P59990 96 aa5.78□□□□□ -1.48
CHL1-201ENST00000256509 TRRAPQ9Y4A5 3859 aa5.75□□□□□ -1.49
CHL1-201ENST00000256509 KRTAP10-12P60413 245 aa5.72□□□□□ -1.49
CHL1-201ENST00000256509 KRTAP23-1A1A580 65 aa5.69□□□□□ -1.5
CHL1-201ENST00000256509 KRTAP10-5P60370 271 aa5.65□□□□□ -1.5
CHL1-201ENST00000256509 VPS13CQ709C8 3753 aa5.65□□□□□ -1.51
CHL1-201ENST00000256509 KRTAP8-1Q8IUC2 63 aa5.55□□□□□ -1.52
CHL1-201ENST00000256509 KRTAP4-5Q9BYR2 181 aa5.48□□□□□ -1.53
CHL1-201ENST00000256509 KRTAP12-3P60328 96 aa5.45□□□□□ -1.54
CHL1-201ENST00000256509 KRTAP3-1Q9BYR8 98 aa5.42□□□□□ -1.54
CHL1-201ENST00000256509 LCE3AQ5TA76 89 aa5.36□□□□□ -1.55
CHL1-201ENST00000256509 MT1HL1P0DM35 61 aa5.25□□□□□ -1.57
CHL1-201ENST00000256509 AKAP9Q99996 3911 aa5.23□□□□□ -1.57
CHL1-201ENST00000256509 SPRR2FQ96RM1 72 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms