RNA–Protein interactions for RNA: ENST00000255531.8

PCDH19-201, Transcript of protocadherin 19, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH19, Length 7,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-201ENST00000255531 DMXL2Q8TDJ6 3036 aa5.08□□□□□ -1.6
PCDH19-201ENST00000255531 MKI67P46013 3256 aaKnown RBP5.07□□□□□ -1.6
PCDH19-201ENST00000255531 NIPBLQ6KC79 2804 aaeCLIP5.07□□□□□ -1.6
PCDH19-201ENST00000255531 CELSR2Q9HCU4 2923 aa5.05□□□□□ -1.6
PCDH19-201ENST00000255531 ASH1LQ9NR48 2969 aaKnown RBP5.05□□□□□ -1.6
PCDH19-201ENST00000255531 TENM4Q6N022 2769 aa5.05□□□□□ -1.6
PCDH19-201ENST00000255531 KRTAP13-2Q52LG2 175 aa5.05□□□□□ -1.6
PCDH19-201ENST00000255531 FREM2Q5SZK8 3169 aa5.04□□□□□ -1.6
PCDH19-201ENST00000255531 KRTAP12-2P59991 146 aa5.03□□□□□ -1.6
PCDH19-201ENST00000255531 LAMA1P25391 3075 aa5.03□□□□□ -1.6
PCDH19-201ENST00000255531 XIRP2A4UGR9 3374 aa5.03□□□□□ -1.6
PCDH19-201ENST00000255531 KRTAP13-1Q8IUC0 172 aa5.02□□□□□ -1.61
PCDH19-201ENST00000255531 TNRC18O15417 2968 aaPredicted RBP5.01□□□□□ -1.61
PCDH19-201ENST00000255531 ZZEF1O43149 2961 aa5.01□□□□□ -1.61
PCDH19-201ENST00000255531 LAMA3Q16787 3333 aa5□□□□□ -1.61
PCDH19-201ENST00000255531 NBEAQ8NFP9 2946 aa4.98□□□□□ -1.61
PCDH19-201ENST00000255531 COL12A1Q99715 3063 aa4.97□□□□□ -1.61
PCDH19-201ENST00000255531 KRTAP13-4Q3LI77 160 aa4.96□□□□□ -1.61
PCDH19-201ENST00000255531 HTTP42858 3142 aa4.96□□□□□ -1.61
PCDH19-201ENST00000255531 TACC2O95359 2948 aa4.96□□□□□ -1.61
PCDH19-201ENST00000255531 UNC80Q8N2C7 3258 aa4.95□□□□□ -1.62
PCDH19-201ENST00000255531 KRTAP10-10P60014 251 aa4.95□□□□□ -1.62
PCDH19-201ENST00000255531 TGP01266 2768 aa4.94□□□□□ -1.62
PCDH19-201ENST00000255531 A0A1B0GVY2 172 aa4.93□□□□□ -1.62
PCDH19-201ENST00000255531 DCHS2Q6V1P9 2916 aa4.91□□□□□ -1.62
PCDH19-201ENST00000255531 KRTAP7-1Q8IUC3 87 aa4.91□□□□□ -1.62
PCDH19-201ENST00000255531 CELSR3Q9NYQ7 3312 aa4.9□□□□□ -1.63
PCDH19-201ENST00000255531 BOD1L1Q8NFC6 3051 aa4.89□□□□□ -1.63
PCDH19-201ENST00000255531 XP32Q5T750 250 aa4.89□□□□□ -1.63
PCDH19-201ENST00000255531 KRTAP21-3Q3LHN1 58 aa4.88□□□□□ -1.63
PCDH19-201ENST00000255531 SRRM2Q9UQ35 2752 aaKnown RBP4.88□□□□□ -1.63
PCDH19-201ENST00000255531 PDZD2O15018 2839 aa4.88□□□□□ -1.63
PCDH19-201ENST00000255531 KRTAP15-1Q3LI76 137 aa4.87□□□□□ -1.63
PCDH19-201ENST00000255531 PKD1L1Q8TDX9 2849 aa4.84□□□□□ -1.63
PCDH19-201ENST00000255531 BRCA2P51587 3418 aa4.82□□□□□ -1.64
PCDH19-201ENST00000255531 TPRXLQ17RH7 258 aa4.82□□□□□ -1.64
PCDH19-201ENST00000255531 ADGRG4Q8IZF6 3080 aa4.81□□□□□ -1.64
PCDH19-201ENST00000255531 ZANQ9Y493 2812 aa4.81□□□□□ -1.64
PCDH19-201ENST00000255531 ATMQ13315 3056 aa4.8□□□□□ -1.64
PCDH19-201ENST00000255531 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
PCDH19-201ENST00000255531 VCANP13611 3396 aa4.78□□□□□ -1.64
PCDH19-201ENST00000255531 COL6A3P12111 3177 aa4.77□□□□□ -1.65
PCDH19-201ENST00000255531 USP34Q70CQ2 3546 aa4.76□□□□□ -1.65
PCDH19-201ENST00000255531 KRTAP12-1P59990 96 aa4.76□□□□□ -1.65
PCDH19-201ENST00000255531 CELSR1Q9NYQ6 3014 aa4.76□□□□□ -1.65
PCDH19-201ENST00000255531 VWFP04275 2813 aa4.74□□□□□ -1.65
PCDH19-201ENST00000255531 CFAP47Q6ZTR5 3102 aa4.73□□□□□ -1.65
PCDH19-201ENST00000255531 DMXL1Q9Y485 3027 aa4.71□□□□□ -1.66
PCDH19-201ENST00000255531 FBN2P35556 2912 aa4.71□□□□□ -1.66
PCDH19-201ENST00000255531 DNAH14Q0VDD8 3507 aa4.69□□□□□ -1.66
PCDH19-201ENST00000255531 TENM2Q9NT68 2774 aa4.68□□□□□ -1.66
PCDH19-201ENST00000255531 MXRA5Q9NR99 2828 aa4.67□□□□□ -1.66
PCDH19-201ENST00000255531 EYSQ5T1H1 3165 aa4.66□□□□□ -1.66
PCDH19-201ENST00000255531 SPEGQ15772 3267 aa4.66□□□□□ -1.66
PCDH19-201ENST00000255531 CDH23Q9H251 3354 aa4.65□□□□□ -1.67
PCDH19-201ENST00000255531 KRTAP1-4P0C5Y4 121 aa4.65□□□□□ -1.67
PCDH19-201ENST00000255531 KRTAP13-3Q3SY46 172 aa4.62□□□□□ -1.67
PCDH19-201ENST00000255531 COL7A1Q02388 2944 aa4.56□□□□□ -1.68
PCDH19-201ENST00000255531 SZT2Q5T011 3432 aa4.56□□□□□ -1.68
PCDH19-201ENST00000255531 HRNRQ86YZ3 2850 aaPredicted RBP4.47□□□□□ -1.69
PCDH19-201ENST00000255531 CRCT1Q9UGL9 99 aa4.44□□□□□ -1.7
PCDH19-201ENST00000255531 MYO15AQ9UKN7 3530 aa4.43□□□□□ -1.7
PCDH19-201ENST00000255531 ZFHX3Q15911 3703 aa4.43□□□□□ -1.7
PCDH19-201ENST00000255531 KRTAP10-12P60413 245 aa4.42□□□□□ -1.7
PCDH19-201ENST00000255531 ZFHX4Q86UP3 3567 aa4.4□□□□□ -1.7
PCDH19-201ENST00000255531 LOC400499M0QZD8 3231 aa4.39□□□□□ -1.71
PCDH19-201ENST00000255531 NBPF19A0A087WUL8 3843 aa4.38□□□□□ -1.71
PCDH19-201ENST00000255531 OTOGQ6ZRI0 2925 aa4.38□□□□□ -1.71
PCDH19-201ENST00000255531 FBN1P35555 2871 aaKnown RBP4.36□□□□□ -1.71
PCDH19-201ENST00000255531 KRTAP10-6P60371 365 aaPredicted RBP4.36□□□□□ -1.71
PCDH19-201ENST00000255531 FBN3Q75N90 2809 aa4.33□□□□□ -1.72
PCDH19-201ENST00000255531 DCHS1Q96JQ0 3298 aa4.33□□□□□ -1.72
PCDH19-201ENST00000255531 KRTAP12-3P60328 96 aa4.31□□□□□ -1.72
PCDH19-201ENST00000255531 KRTAP10-5P60370 271 aa4.31□□□□□ -1.72
PCDH19-201ENST00000255531 MEGF8Q7Z7M0 2845 aa4.3□□□□□ -1.72
PCDH19-201ENST00000255531 KRTAP3-1Q9BYR8 98 aa4.3□□□□□ -1.72
PCDH19-201ENST00000255531 SPTBN5Q9NRC6 3674 aaKnown RBP4.25□□□□□ -1.73
PCDH19-201ENST00000255531 WDFY3Q8IZQ1 3526 aa4.2□□□□□ -1.74
PCDH19-201ENST00000255531 LCE3AQ5TA76 89 aa4.13□□□□□ -1.75
PCDH19-201ENST00000255531 ASPMQ8IZT6 3477 aa4.13□□□□□ -1.75
PCDH19-201ENST00000255531 KRTAP3-2Q9BYR7 98 aa4.08□□□□□ -1.76
PCDH19-201ENST00000255531 RELNP78509 3460 aa4.06□□□□□ -1.76
PCDH19-201ENST00000255531 LAMA5O15230 3695 aa4.02□□□□□ -1.77
PCDH19-201ENST00000255531 KRTAP3-3Q9BYR6 98 aa4.02□□□□□ -1.77
PCDH19-201ENST00000255531 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
PCDH19-201ENST00000255531 TRRAPQ9Y4A5 3859 aa3.96□□□□□ -1.77
PCDH19-201ENST00000255531 DMDP11532 3685 aa3.94□□□□□ -1.78
PCDH19-201ENST00000255531 SPENQ96T58 3664 aaKnown RBP3.94□□□□□ -1.78
PCDH19-201ENST00000255531 KRTAP8-1Q8IUC2 63 aa3.92□□□□□ -1.78
PCDH19-201ENST00000255531 ALMS1Q8TCU4 4167 aa3.91□□□□□ -1.78
PCDH19-201ENST00000255531 SMG1Q96Q15 3661 aaKnown RBP3.85□□□□□ -1.79
PCDH19-201ENST00000255531 MUC3AQ02505 3323 aa3.84□□□□□ -1.79
PCDH19-201ENST00000255531 CSMD1Q96PZ7 3565 aa3.84□□□□□ -1.79
PCDH19-201ENST00000255531 KRTAP10-4P60372 401 aaPredicted RBP3.82□□□□□ -1.8
PCDH19-201ENST00000255531 CUBNO60494 3623 aa3.81□□□□□ -1.8
PCDH19-201ENST00000255531 MT3P25713 68 aa3.8□□□□□ -1.8
PCDH19-201ENST00000255531 KRTAP19-4Q3LI73 84 aa3.73□□□□□ -1.81
PCDH19-201ENST00000255531 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.81
PCDH19-201ENST00000255531 CSMD2Q7Z408 3487 aa3.68□□□□□ -1.82
PCDH19-201ENST00000255531 VPS13CQ709C8 3753 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms