RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 H1FX-AS1Q4G0G2 97 aa4.4□□□□□ -1.71
USP29-201ENST00000254181 CFAP46Q8IYW2 2715 aa4.4□□□□□ -1.71
USP29-201ENST00000254181 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
USP29-201ENST00000254181 TYMSOSQ8TAI1 123 aa4.39□□□□□ -1.71
USP29-201ENST00000254181 KRTAP3-3Q9BYR6 98 aa4.39□□□□□ -1.71
USP29-201ENST00000254181 KRTAP3-2Q9BYR7 98 aa4.39□□□□□ -1.71
USP29-201ENST00000254181 SRRM2Q9UQ35 2752 aaKnown RBP4.39□□□□□ -1.71
USP29-201ENST00000254181 UBE2DNLQ8IWF7 75 aa4.38□□□□□ -1.71
USP29-201ENST00000254181 NBDYA0A0U1RRE5 68 aa4.38□□□□□ -1.71
USP29-201ENST00000254181 ZANQ9Y493 2812 aa4.36□□□□□ -1.71
USP29-201ENST00000254181 H3BNG1 76 aa4.35□□□□□ -1.71
USP29-201ENST00000254181 ATRQ13535 2644 aa4.35□□□□□ -1.71
USP29-201ENST00000254181 NOTCH1P46531 2555 aa4.35□□□□□ -1.71
USP29-201ENST00000254181 RPL37P61927 97 aaKnown RBP4.33□□□□□ -1.72
USP29-201ENST00000254181 OTOGQ6ZRI0 2925 aa4.33□□□□□ -1.72
USP29-201ENST00000254181 HIVEP1P15822 2718 aa4.32□□□□□ -1.72
USP29-201ENST00000254181 NIPBLQ6KC79 2804 aaeCLIP4.31□□□□□ -1.72
USP29-201ENST00000254181 TPRXLQ17RH7 258 aa4.31□□□□□ -1.72
USP29-201ENST00000254181 USP24Q9UPU5 2620 aa4.3□□□□□ -1.72
USP29-201ENST00000254181 HECTD1Q9ULT8 2610 aa4.29□□□□□ -1.72
USP29-201ENST00000254181 KRTAP13-3Q3SY46 172 aa4.29□□□□□ -1.72
USP29-201ENST00000254181 COL6A5A8TX70 2615 aa4.29□□□□□ -1.72
USP29-201ENST00000254181 SPACA4Q8TDM5 124 aa4.29□□□□□ -1.72
USP29-201ENST00000254181 R4GN34 69 aa4.27□□□□□ -1.73
USP29-201ENST00000254181 MXRA5Q9NR99 2828 aa4.27□□□□□ -1.73
USP29-201ENST00000254181 TEP1Q99973 2627 aaKnown RBP4.26□□□□□ -1.73
USP29-201ENST00000254181 STAB2Q8WWQ8 2551 aa4.25□□□□□ -1.73
USP29-201ENST00000254181 COX6B2Q6YFQ2 88 aa4.25□□□□□ -1.73
USP29-201ENST00000254181 NBEAL1Q6ZS30 2694 aa4.25□□□□□ -1.73
USP29-201ENST00000254181 TENM2Q9NT68 2774 aa4.23□□□□□ -1.73
USP29-201ENST00000254181 KRTAP10-9P60411 292 aa4.22□□□□□ -1.73
USP29-201ENST00000254181 FLNAP21333 2647 aaKnown RBP4.22□□□□□ -1.73
USP29-201ENST00000254181 KRTAP24-1Q3LI83 254 aa4.18□□□□□ -1.74
USP29-201ENST00000254181 TGP01266 2768 aa4.17□□□□□ -1.74
USP29-201ENST00000254181 ZNF292O60281 2723 aa4.17□□□□□ -1.74
USP29-201ENST00000254181 KRTAP10-3P60369 221 aa4.16□□□□□ -1.74
USP29-201ENST00000254181 PRO2289Q9P1D8 64 aa4.16□□□□□ -1.74
USP29-201ENST00000254181 PDZD2O15018 2839 aa4.15□□□□□ -1.74
USP29-201ENST00000254181 ZNF469Q96JG9 3925 aaPredicted RBP4.15□□□□□ -1.75
USP29-201ENST00000254181 ITPR3Q14573 2671 aa4.14□□□□□ -1.75
USP29-201ENST00000254181 NSD1Q96L73 2696 aaPredicted RBP4.14□□□□□ -1.75
USP29-201ENST00000254181 STAB1Q9NY15 2570 aa4.14□□□□□ -1.75
USP29-201ENST00000254181 KRTAP13-1Q8IUC0 172 aa4.14□□□□□ -1.75
USP29-201ENST00000254181 FBN1P35555 2871 aaKnown RBP4.13□□□□□ -1.75
USP29-201ENST00000254181 PLAC4Q8WY50 150 aa4.12□□□□□ -1.75
USP29-201ENST00000254181 FLNBO75369 2602 aaKnown RBP4.12□□□□□ -1.75
USP29-201ENST00000254181 PKD1L1Q8TDX9 2849 aa4.12□□□□□ -1.75
USP29-201ENST00000254181 S4R3F8 94 aa4.1□□□□□ -1.75
USP29-201ENST00000254181 KRTAP1-5Q9BYS1 174 aa4.09□□□□□ -1.75
USP29-201ENST00000254181 FLNCQ14315 2725 aa4.09□□□□□ -1.75
USP29-201ENST00000254181 C9orf92A6NGG3 77 aa4.08□□□□□ -1.76
USP29-201ENST00000254181 SMR3AQ99954 134 aa4.08□□□□□ -1.76
USP29-201ENST00000254181 COL7A1Q02388 2944 aa4.07□□□□□ -1.76
USP29-201ENST00000254181 ANK3Q12955 4377 aaKnown RBP4.07□□□□□ -1.76
USP29-201ENST00000254181 MGAM2Q2M2H8 2515 aa4.07□□□□□ -1.76
USP29-201ENST00000254181 ALMS1Q8TCU4 4167 aa4.05□□□□□ -1.76
USP29-201ENST00000254181 MAST4O15021 2626 aa4.03□□□□□ -1.76
USP29-201ENST00000254181 ITPR2Q14571 2701 aa4.03□□□□□ -1.76
USP29-201ENST00000254181 TENM3Q9P273 2699 aa4.03□□□□□ -1.76
USP29-201ENST00000254181 KMT2BQ9UMN6 2715 aaPredicted RBP4.03□□□□□ -1.76
USP29-201ENST00000254181 LCE2CQ5TA81 110 aa4.02□□□□□ -1.77
USP29-201ENST00000254181 LCE2DQ5TA82 110 aaPredicted RBP4.02□□□□□ -1.77
USP29-201ENST00000254181 KRTAP10-11P60412 298 aa4.01□□□□□ -1.77
USP29-201ENST00000254181 VWFP04275 2813 aa4□□□□□ -1.77
USP29-201ENST00000254181 LCE2AQ5TA79 106 aaPredicted RBP3.98□□□□□ -1.77
USP29-201ENST00000254181 KRTAP13-4Q3LI77 160 aa3.98□□□□□ -1.77
USP29-201ENST00000254181 CSMD3Q7Z407 3707 aa3.97□□□□□ -1.77
USP29-201ENST00000254181 KRTAP12-2P59991 146 aa3.97□□□□□ -1.77
USP29-201ENST00000254181 KRTAP10-8P60410 259 aa3.97□□□□□ -1.77
USP29-201ENST00000254181 IGSF10Q6WRI0 2623 aa3.95□□□□□ -1.78
USP29-201ENST00000254181 KRTAP1-3Q8IUG1 177 aa3.95□□□□□ -1.78
USP29-201ENST00000254181 MEGF8Q7Z7M0 2845 aa3.95□□□□□ -1.78
USP29-201ENST00000254181 ANK2Q01484 3957 aa3.93□□□□□ -1.78
USP29-201ENST00000254181 KRTAP3-1Q9BYR8 98 aa3.93□□□□□ -1.78
USP29-201ENST00000254181 TRRAPQ9Y4A5 3859 aa3.92□□□□□ -1.78
USP29-201ENST00000254181 KRTAP13-2Q52LG2 175 aa3.91□□□□□ -1.78
USP29-201ENST00000254181 KRTAP1-1Q07627 177 aa3.91□□□□□ -1.78
USP29-201ENST00000254181 XP32Q5T750 250 aa3.9□□□□□ -1.79
USP29-201ENST00000254181 LYSTQ99698 3801 aa3.89□□□□□ -1.79
USP29-201ENST00000254181 KRTAP10-6P60371 365 aaPredicted RBP3.88□□□□□ -1.79
USP29-201ENST00000254181 KRTAP12-1P59990 96 aa3.87□□□□□ -1.79
USP29-201ENST00000254181 TENM1Q9UKZ4 2725 aa3.87□□□□□ -1.79
USP29-201ENST00000254181 DNAH1Q9P2D7 4330 aa3.84□□□□□ -1.79
USP29-201ENST00000254181 CMYA5Q8N3K9 4069 aa3.84□□□□□ -1.8
USP29-201ENST00000254181 Q6ZRN7 208 aaPredicted RBP3.83□□□□□ -1.8
USP29-201ENST00000254181 M0QZ58 72 aa3.82□□□□□ -1.8
USP29-201ENST00000254181 LCE2BO14633 110 aa3.82□□□□□ -1.8
USP29-201ENST00000254181 TENM4Q6N022 2769 aa3.82□□□□□ -1.8
USP29-201ENST00000254181 INE1O15225 51 aa3.8□□□□□ -1.8
USP29-201ENST00000254181 FBN3Q75N90 2809 aa3.77□□□□□ -1.81
USP29-201ENST00000254181 PP632Q6XCG6 107 aa3.74□□□□□ -1.81
USP29-201ENST00000254181 DNAH3Q8TD57 4116 aa3.71□□□□□ -1.82
USP29-201ENST00000254181 KRTAP1-4P0C5Y4 121 aa3.68□□□□□ -1.82
USP29-201ENST00000254181 DNAH7Q8WXX0 4024 aa3.68□□□□□ -1.82
USP29-201ENST00000254181 KRTAP10-2P60368 255 aa3.64□□□□□ -1.83
USP29-201ENST00000254181 SMR3BP02814 79 aaPredicted RBP3.63□□□□□ -1.83
USP29-201ENST00000254181 LORP23490 312 aaPredicted RBP3.63□□□□□ -1.83
USP29-201ENST00000254181 DNAH9Q9NYC9 4486 aa3.62□□□□□ -1.83
USP29-201ENST00000254181 RPS29P62273 56 aaKnown RBP3.61□□□□□ -1.83
USP29-201ENST00000254181 J3QKU1 62 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms