RNA–Protein interactions for RNA: ENST00000253458.11

GSE1-201, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GSE1, Length 7,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-201ENST00000253458 KRTAP11-1Q8IUC1 163 aa7.5□□□□□ -1.21
GSE1-201ENST00000253458 Q5XG85 94 aa7.49□□□□□ -1.21
GSE1-201ENST00000253458 ITPR2Q14571 2701 aa7.49□□□□□ -1.21
GSE1-201ENST00000253458 COL12A1Q99715 3063 aa7.47□□□□□ -1.21
GSE1-201ENST00000253458 A8MUU9 505 aa7.46□□□□□ -1.22
GSE1-201ENST00000253458 UBR5O95071 2799 aaPredicted RBP7.44□□□□□ -1.22
GSE1-201ENST00000253458 KRTAP25-1Q3LHN0 102 aa7.42□□□□□ -1.22
GSE1-201ENST00000253458 LOC400499M0QZD8 3231 aa7.41□□□□□ -1.22
GSE1-201ENST00000253458 SPRR1BP22528 89 aa7.41□□□□□ -1.22
GSE1-201ENST00000253458 NSD1Q96L73 2696 aaPredicted RBP7.41□□□□□ -1.22
GSE1-201ENST00000253458 ZZEF1O43149 2961 aa7.39□□□□□ -1.23
GSE1-201ENST00000253458 HIVEP1P15822 2718 aa7.38□□□□□ -1.23
GSE1-201ENST00000253458 KRTAP10-8P60410 259 aa7.37□□□□□ -1.23
GSE1-201ENST00000253458 APCP25054 2843 aa7.36□□□□□ -1.23
GSE1-201ENST00000253458 TNP1P09430 55 aa7.36□□□□□ -1.23
GSE1-201ENST00000253458 UTP20O75691 2785 aaKnown RBP7.34□□□□□ -1.23
GSE1-201ENST00000253458 IGSF10Q6WRI0 2623 aa7.32□□□□□ -1.24
GSE1-201ENST00000253458 DCHS1Q96JQ0 3298 aa7.29□□□□□ -1.24
GSE1-201ENST00000253458 TNRC18O15417 2968 aaPredicted RBP7.27□□□□□ -1.25
GSE1-201ENST00000253458 NBEAQ8NFP9 2946 aa7.27□□□□□ -1.25
GSE1-201ENST00000253458 KRTAP13-2Q52LG2 175 aa7.26□□□□□ -1.25
GSE1-201ENST00000253458 ITPR1Q14643 2758 aa7.25□□□□□ -1.25
GSE1-201ENST00000253458 KRTAP4-16G5E9R7 235 aaPredicted RBP7.23□□□□□ -1.25
GSE1-201ENST00000253458 NBPF19A0A087WUL8 3843 aa7.22□□□□□ -1.25
GSE1-201ENST00000253458 CELSR2Q9HCU4 2923 aa7.21□□□□□ -1.26
GSE1-201ENST00000253458 Q6ZRN7 208 aaPredicted RBP7.21□□□□□ -1.26
GSE1-201ENST00000253458 LAMA5O15230 3695 aa7.19□□□□□ -1.26
GSE1-201ENST00000253458 KRTAP7-1Q8IUC3 87 aa7.18□□□□□ -1.26
GSE1-201ENST00000253458 DMXL1Q9Y485 3027 aa7.18□□□□□ -1.26
GSE1-201ENST00000253458 RELNP78509 3460 aa7.15□□□□□ -1.27
GSE1-201ENST00000253458 ZFHX4Q86UP3 3567 aa7.15□□□□□ -1.27
GSE1-201ENST00000253458 FLNCQ14315 2725 aa7.13□□□□□ -1.27
GSE1-201ENST00000253458 KRTAP29-1A8MX34 341 aaPredicted RBP7.13□□□□□ -1.27
GSE1-201ENST00000253458 TENM4Q6N022 2769 aa7.09□□□□□ -1.28
GSE1-201ENST00000253458 KRTAP10-10P60014 251 aa7.08□□□□□ -1.28
GSE1-201ENST00000253458 CSMD1Q96PZ7 3565 aa7.08□□□□□ -1.28
GSE1-201ENST00000253458 DCHS2Q6V1P9 2916 aa7.05□□□□□ -1.28
GSE1-201ENST00000253458 CELSR1Q9NYQ6 3014 aa7.01□□□□□ -1.29
GSE1-201ENST00000253458 PP632Q6XCG6 107 aa7.01□□□□□ -1.29
GSE1-201ENST00000253458 ASB16-AS1Q495Z4 193 aa6.99□□□□□ -1.29
GSE1-201ENST00000253458 A6NN06 94 aa6.98□□□□□ -1.29
GSE1-201ENST00000253458 TENM1Q9UKZ4 2725 aa6.96□□□□□ -1.29
GSE1-201ENST00000253458 CUBNO60494 3623 aa6.94□□□□□ -1.3
GSE1-201ENST00000253458 XP32Q5T750 250 aa6.94□□□□□ -1.3
GSE1-201ENST00000253458 RPS29P62273 56 aaKnown RBP6.92□□□□□ -1.3
GSE1-201ENST00000253458 KRTAP13-1Q8IUC0 172 aa6.91□□□□□ -1.3
GSE1-201ENST00000253458 PKD1L1Q8TDX9 2849 aa6.88□□□□□ -1.31
GSE1-201ENST00000253458 NF1P21359 2839 aa6.88□□□□□ -1.31
GSE1-201ENST00000253458 ZFHX3Q15911 3703 aa6.88□□□□□ -1.31
GSE1-201ENST00000253458 FBN2P35556 2912 aa6.87□□□□□ -1.31
GSE1-201ENST00000253458 TENM2Q9NT68 2774 aa6.87□□□□□ -1.31
GSE1-201ENST00000253458 DMDP11532 3685 aa6.85□□□□□ -1.31
GSE1-201ENST00000253458 NIPBLQ6KC79 2804 aaeCLIP6.85□□□□□ -1.313e-6■■■□□ 17
GSE1-201ENST00000253458 VWFP04275 2813 aa6.84□□□□□ -1.31
GSE1-201ENST00000253458 PRO2289Q9P1D8 64 aa6.82□□□□□ -1.32
GSE1-201ENST00000253458 SMG1Q96Q15 3661 aaKnown RBP6.81□□□□□ -1.32
GSE1-201ENST00000253458 SPENQ96T58 3664 aaKnown RBP6.81□□□□□ -1.32
GSE1-201ENST00000253458 CRCT1Q9UGL9 99 aa6.81□□□□□ -1.32
GSE1-201ENST00000253458 ZANQ9Y493 2812 aa6.79□□□□□ -1.32
GSE1-201ENST00000253458 SVEP1Q4LDE5 3571 aa6.77□□□□□ -1.33
GSE1-201ENST00000253458 KRTAP1-4P0C5Y4 121 aa6.76□□□□□ -1.33
GSE1-201ENST00000253458 KRTAP21-3Q3LHN1 58 aa6.73□□□□□ -1.33
GSE1-201ENST00000253458 CSMD2Q7Z408 3487 aa6.68□□□□□ -1.34
GSE1-201ENST00000253458 TENM3Q9P273 2699 aa6.67□□□□□ -1.34
GSE1-201ENST00000253458 KRTAP12-2P59991 146 aa6.66□□□□□ -1.34
GSE1-201ENST00000253458 TPRXLQ17RH7 258 aa6.64□□□□□ -1.35
GSE1-201ENST00000253458 H0YAA0 97 aa6.63□□□□□ -1.35
GSE1-201ENST00000253458 HRNRQ86YZ3 2850 aaPredicted RBP6.6□□□□□ -1.35
GSE1-201ENST00000253458 KRTAP13-3Q3SY46 172 aa6.58□□□□□ -1.36
GSE1-201ENST00000253458 PDZD2O15018 2839 aa6.58□□□□□ -1.36
GSE1-201ENST00000253458 TGP01266 2768 aa6.55□□□□□ -1.36
GSE1-201ENST00000253458 MUC3AQ02505 3323 aa6.54□□□□□ -1.36
GSE1-201ENST00000253458 MXRA5Q9NR99 2828 aa6.48□□□□□ -1.37
GSE1-201ENST00000253458 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
GSE1-201ENST00000253458 SRRM2Q9UQ35 2752 aaKnown RBP6.43□□□□□ -1.38
GSE1-201ENST00000253458 FBN1P35555 2871 aaKnown RBP6.33□□□□□ -1.4
GSE1-201ENST00000253458 CSMD3Q7Z407 3707 aa6.3□□□□□ -1.4
GSE1-201ENST00000253458 TRRAPQ9Y4A5 3859 aa6.29□□□□□ -1.4
GSE1-201ENST00000253458 VPS13CQ709C8 3753 aa6.21□□□□□ -1.41
GSE1-201ENST00000253458 MEGF8Q7Z7M0 2845 aa6.21□□□□□ -1.41
GSE1-201ENST00000253458 COL7A1Q02388 2944 aa6.21□□□□□ -1.42
GSE1-201ENST00000253458 KRTAP10-6P60371 365 aaPredicted RBP6.18□□□□□ -1.42
GSE1-201ENST00000253458 KRTAP4-5Q9BYR2 181 aa6.13□□□□□ -1.43
GSE1-201ENST00000253458 KRTAP12-1P59990 96 aa6.11□□□□□ -1.43
GSE1-201ENST00000253458 FBN3Q75N90 2809 aa6.1□□□□□ -1.43
GSE1-201ENST00000253458 KRTAP13-4Q3LI77 160 aa6.09□□□□□ -1.43
GSE1-201ENST00000253458 ANK3Q12955 4377 aaKnown RBP6.08□□□□□ -1.44
GSE1-201ENST00000253458 BSNQ9UPA5 3926 aa6.08□□□□□ -1.44
GSE1-201ENST00000253458 KRTAP10-5P60370 271 aa6.03□□□□□ -1.44
GSE1-201ENST00000253458 KRTAP3-1Q9BYR8 98 aa6.02□□□□□ -1.45
GSE1-201ENST00000253458 KRTAP10-7P60409 375 aaPredicted RBP6□□□□□ -1.45
GSE1-201ENST00000253458 OTOGQ6ZRI0 2925 aa5.97□□□□□ -1.45
GSE1-201ENST00000253458 INE1O15225 51 aa5.93□□□□□ -1.46
GSE1-201ENST00000253458 LORP23490 312 aaPredicted RBP5.92□□□□□ -1.46
GSE1-201ENST00000253458 HUWE1Q7Z6Z7 4374 aaKnown RBP5.87□□□□□ -1.47
GSE1-201ENST00000253458 KRTAP10-12P60413 245 aa5.85□□□□□ -1.47
GSE1-201ENST00000253458 MT1HL1P0DM35 61 aa5.82□□□□□ -1.48
GSE1-201ENST00000253458 ZNF469Q96JG9 3925 aaPredicted RBP5.76□□□□□ -1.49
GSE1-201ENST00000253458 AKAP9Q99996 3911 aa5.69□□□□□ -1.5
GSE1-201ENST00000253458 LCE3AQ5TA76 89 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms