RNA–Protein interactions for RNA: ENST00000252487.9

TOMM40-201, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOMM40, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-201ENST00000252487 IGHV6-1A0A0B4J1U7 121 aa14.47□□□□□ -0.09
TOMM40-201ENST00000252487 CXCL6P80162 114 aa14.46□□□□□ -0.1
TOMM40-201ENST00000252487 A0A1B0GVX0 72 aa14.45□□□□□ -0.1
TOMM40-201ENST00000252487 NOTCH2NLQ7Z3S9 236 aa14.44□□□□□ -0.1
TOMM40-201ENST00000252487 C9orf92A6NGG3 77 aa14.44□□□□□ -0.1
TOMM40-201ENST00000252487 NDUFB1O75438 58 aa14.42□□□□□ -0.1
TOMM40-201ENST00000252487 ATP5EP2Q5VTU8 51 aa14.42□□□□□ -0.1
TOMM40-201ENST00000252487 PRR15Q8IV56 129 aa14.42□□□□□ -0.1
TOMM40-201ENST00000252487 MT-ATP8P03928 68 aa14.38□□□□□ -0.11
TOMM40-201ENST00000252487 LPAP08519 4548 aa14.37□□□□□ -0.11
TOMM40-201ENST00000252487 KRTAP13-3Q3SY46 172 aa14.36□□□□□ -0.11
TOMM40-201ENST00000252487 HIST1H4AP62805 103 aaKnown RBP14.34□□□□□ -0.11
TOMM40-201ENST00000252487 HMCN2Q8NDA2 5059 aa14.33□□□□□ -0.12
TOMM40-201ENST00000252487 C8orf17Q9NRJ1 99 aa14.32□□□□□ -0.12
TOMM40-201ENST00000252487 LINC00313P59037 77 aa14.31□□□□□ -0.12
TOMM40-201ENST00000252487 A0A087WVE0 104 aa14.29□□□□□ -0.12
TOMM40-201ENST00000252487 MMP24-AS1A0A0U1RRL7 71 aa14.29□□□□□ -0.12
TOMM40-201ENST00000252487 TPRXLQ17RH7 258 aa14.27□□□□□ -0.12
TOMM40-201ENST00000252487 C8orf87E5RJ46 101 aa14.27□□□□□ -0.13
TOMM40-201ENST00000252487 WFDC13Q8IUB5 93 aa14.27□□□□□ -0.13
TOMM40-201ENST00000252487 KRTAP16-1A8MUX0 517 aa14.24□□□□□ -0.13
TOMM40-201ENST00000252487 HCG22E2RYF7 251 aa14.21□□□□□ -0.14
TOMM40-201ENST00000252487 XP32Q5T750 250 aa14.2□□□□□ -0.14
TOMM40-201ENST00000252487 LRP2P98164 4655 aa14.19□□□□□ -0.14
TOMM40-201ENST00000252487 hDV103S1A0JD37 113 aa14.18□□□□□ -0.14
TOMM40-201ENST00000252487 CASC2Q6XLA1 102 aa14.18□□□□□ -0.14
TOMM40-201ENST00000252487 TMEM254Q8TBM7 123 aa14.12□□□□□ -0.15
TOMM40-201ENST00000252487 MRPL34Q9BQ48 92 aaKnown RBP14.11□□□□□ -0.15
TOMM40-201ENST00000252487 IMUPQ9GZP8 106 aa14.1□□□□□ -0.15
TOMM40-201ENST00000252487 C20orf166-AS1Q96NR2 134 aa14.06□□□□□ -0.16
TOMM40-201ENST00000252487 A8MUU9 505 aa14.04□□□□□ -0.16
TOMM40-201ENST00000252487 NDUFS5O43920 106 aa14.04□□□□□ -0.16
TOMM40-201ENST00000252487 Q8N9P0 234 aaPredicted RBP14.04□□□□□ -0.16
TOMM40-201ENST00000252487 Q75L30 129 aa14.01□□□□□ -0.17
TOMM40-201ENST00000252487 RPL37P61927 97 aaKnown RBP14□□□□□ -0.17
TOMM40-201ENST00000252487 FAM236AA0A1B0GUQ0 79 aa13.98□□□□□ -0.17
TOMM40-201ENST00000252487 FAM236BA0A1B0GV22 79 aa13.98□□□□□ -0.17
TOMM40-201ENST00000252487 SCGB1A1P11684 91 aa13.89□□□□□ -0.19
TOMM40-201ENST00000252487 PCOTHQ58A44 107 aa13.88□□□□□ -0.19
TOMM40-201ENST00000252487 ATP11AUNQ6ZP68 121 aa13.85□□□□□ -0.19
TOMM40-201ENST00000252487 Q5W150 140 aa13.84□□□□□ -0.19
TOMM40-201ENST00000252487 ZCCHC13Q8WW36 166 aaKnown RBP13.84□□□□□ -0.19
TOMM40-201ENST00000252487 OCR1Q9BZK8 76 aa13.81□□□□□ -0.2
TOMM40-201ENST00000252487 MUC17Q685J3 4493 aa13.81□□□□□ -0.2
TOMM40-201ENST00000252487 SEC61BP60468 96 aaKnown RBP13.79□□□□□ -0.2
TOMM40-201ENST00000252487 UBR4Q5T4S7 5183 aa13.79□□□□□ -0.2
TOMM40-201ENST00000252487 TP53AIP1Q9HCN2 124 aa13.78□□□□□ -0.2
TOMM40-201ENST00000252487 ATOX1O00244 68 aa13.72□□□□□ -0.21
TOMM40-201ENST00000252487 UQCRQO14949 82 aa13.72□□□□□ -0.21
TOMM40-201ENST00000252487 KRTAP4-1Q9BYQ7 146 aa13.67□□□□□ -0.22
TOMM40-201ENST00000252487 TRAV22A0A0B4J277 110 aa13.67□□□□□ -0.22
TOMM40-201ENST00000252487 TRAV7A0A075B6U4 112 aa13.64□□□□□ -0.23
TOMM40-201ENST00000252487 H0Y9P7 68 aa13.64□□□□□ -0.23
TOMM40-201ENST00000252487 SMIM20Q8N5G0 67 aa13.61□□□□□ -0.23
TOMM40-201ENST00000252487 IGKV2D-30A0A075B6S6 120 aa13.59□□□□□ -0.23
TOMM40-201ENST00000252487 IGKV2-30P06310 120 aa13.59□□□□□ -0.23
TOMM40-201ENST00000252487 RNF213Q63HN8 5207 aa13.57□□□□□ -0.24
TOMM40-201ENST00000252487 MUC2Q02817 5179 aa13.56□□□□□ -0.24
TOMM40-201ENST00000252487 SPINK7P58062 85 aa13.56□□□□□ -0.24
TOMM40-201ENST00000252487 SERP2Q8N6R1 65 aa13.56□□□□□ -0.24
TOMM40-201ENST00000252487 C5orf47Q569G3 176 aa13.55□□□□□ -0.24
TOMM40-201ENST00000252487 LINC00208Q96KT6 92 aa13.53□□□□□ -0.24
TOMM40-201ENST00000252487 MP68P56378 58 aa13.52□□□□□ -0.25
TOMM40-201ENST00000252487 ANAPC13Q9BS18 74 aa13.5□□□□□ -0.25
TOMM40-201ENST00000252487 C1orf64Q8NEQ6 169 aa13.49□□□□□ -0.25
TOMM40-201ENST00000252487 C7orf65Q6ZTY9 151 aa13.48□□□□□ -0.25
TOMM40-201ENST00000252487 LOC101927531A0A1B0GV80 90 aa13.44□□□□□ -0.26
TOMM40-201ENST00000252487 CYP4F30PQ9H0H9 118 aa13.43□□□□□ -0.26
TOMM40-201ENST00000252487 COX7CP15954 63 aa13.42□□□□□ -0.26
TOMM40-201ENST00000252487 SNURFQ9Y675 71 aa13.4□□□□□ -0.26
TOMM40-201ENST00000252487 HRES1P13985 223 aa13.39□□□□□ -0.27
TOMM40-201ENST00000252487 C20orf197Q8N268 126 aa13.39□□□□□ -0.27
TOMM40-201ENST00000252487 A0A0U1RQV1 116 aa13.39□□□□□ -0.27
TOMM40-201ENST00000252487 H3BPC8 53 aa13.37□□□□□ -0.27
TOMM40-201ENST00000252487 KLKP1Q107X0 134 aa13.35□□□□□ -0.27
TOMM40-201ENST00000252487 CCDC179H3BU77 68 aa13.27□□□□□ -0.28
TOMM40-201ENST00000252487 C4orf26Q17RF5 130 aa13.27□□□□□ -0.29
TOMM40-201ENST00000252487 MPLKIPQ8TAP9 179 aa13.25□□□□□ -0.29
TOMM40-201ENST00000252487 CYSTM1Q9H1C7 97 aa13.23□□□□□ -0.29
TOMM40-201ENST00000252487 KRTAP19-2Q3LHN2 52 aa13.18□□□□□ -0.3
TOMM40-201ENST00000252487 RBM12B-AS1Q9P1G2 102 aa13.16□□□□□ -0.3
TOMM40-201ENST00000252487 FAM236DA0A1B0GTK5 79 aa13.13□□□□□ -0.31
TOMM40-201ENST00000252487 FAM236CP0DP71 79 aa13.13□□□□□ -0.31
TOMM40-201ENST00000252487 COX6B2Q6YFQ2 88 aa13.1□□□□□ -0.31
TOMM40-201ENST00000252487 KRTAP3-1Q9BYR8 98 aa13.09□□□□□ -0.31
TOMM40-201ENST00000252487 LCE2CQ5TA81 110 aa13.06□□□□□ -0.32
TOMM40-201ENST00000252487 FAT4Q6V0I7 4981 aa13.06□□□□□ -0.32
TOMM40-201ENST00000252487 PCP4P48539 62 aa13.04□□□□□ -0.32
TOMM40-201ENST00000252487 H7BZZ5 65 aa13.02□□□□□ -0.32
TOMM40-201ENST00000252487 NDUFC1O43677 76 aa12.96□□□□□ -0.33
TOMM40-201ENST00000252487 FLGP20930 4061 aaPredicted RBP12.94□□□□□ -0.34
TOMM40-201ENST00000252487 H1FX-AS1Q4G0G2 97 aa12.93□□□□□ -0.34
TOMM40-201ENST00000252487 SPANXA2-OT1Q8N9U9 137 aa12.89□□□□□ -0.35
TOMM40-201ENST00000252487 DMAC1Q96GE9 116 aa12.89□□□□□ -0.35
TOMM40-201ENST00000252487 A8MUN3 132 aa12.83□□□□□ -0.36
TOMM40-201ENST00000252487 MT1HP80294 61 aa12.82□□□□□ -0.36
TOMM40-201ENST00000252487 S4R3F8 94 aa12.75□□□□□ -0.37
TOMM40-201ENST00000252487 LCA10Q71F78 164 aa12.73□□□□□ -0.37
TOMM40-201ENST00000252487 ACYP2P14621 99 aa12.72□□□□□ -0.37
TOMM40-201ENST00000252487 TMEM258P61165 79 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms