RNA–Protein interactions for RNA: ENST00000244769.8

ATXN1-201, Transcript of ataxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN1, Length 10,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-201ENST00000244769 NIPBLQ6KC79 2804 aaeCLIP5.05□□□□□ -1.6
ATXN1-201ENST00000244769 CRYBG3Q68DQ2 2970 aa5.05□□□□□ -1.6
ATXN1-201ENST00000244769 PRAC1Q96KF2 57 aa5.04□□□□□ -1.6
ATXN1-201ENST00000244769 DNAH14Q0VDD8 3507 aa5.04□□□□□ -1.6
ATXN1-201ENST00000244769 TENM3Q9P273 2699 aa5.04□□□□□ -1.6
ATXN1-201ENST00000244769 KRTAP25-1Q3LHN0 102 aa5.04□□□□□ -1.6
ATXN1-201ENST00000244769 KALRNO60229 2985 aa5.04□□□□□ -1.6
ATXN1-201ENST00000244769 NF1P21359 2839 aa5.02□□□□□ -1.61
ATXN1-201ENST00000244769 LAMA1P25391 3075 aa5.01□□□□□ -1.61
ATXN1-201ENST00000244769 CELSR2Q9HCU4 2923 aa5.01□□□□□ -1.61
ATXN1-201ENST00000244769 ZZEF1O43149 2961 aa4.99□□□□□ -1.61
ATXN1-201ENST00000244769 TPRXLQ17RH7 258 aa4.97□□□□□ -1.61
ATXN1-201ENST00000244769 BOD1L1Q8NFC6 3051 aa4.97□□□□□ -1.61
ATXN1-201ENST00000244769 FBN2P35556 2912 aa4.97□□□□□ -1.61
ATXN1-201ENST00000244769 DMXL2Q8TDJ6 3036 aa4.97□□□□□ -1.61
ATXN1-201ENST00000244769 COL6A3P12111 3177 aa4.96□□□□□ -1.62
ATXN1-201ENST00000244769 COL12A1Q99715 3063 aa4.95□□□□□ -1.62
ATXN1-201ENST00000244769 TNRC18O15417 2968 aaPredicted RBP4.95□□□□□ -1.62
ATXN1-201ENST00000244769 KRTAP13-1Q8IUC0 172 aa4.94□□□□□ -1.62
ATXN1-201ENST00000244769 KRTAP11-1Q8IUC1 163 aa4.94□□□□□ -1.62
ATXN1-201ENST00000244769 ATMQ13315 3056 aa4.94□□□□□ -1.62
ATXN1-201ENST00000244769 ASH1LQ9NR48 2969 aaKnown RBP4.94□□□□□ -1.62
ATXN1-201ENST00000244769 KRTAP10-8P60410 259 aa4.93□□□□□ -1.62
ATXN1-201ENST00000244769 ADGRG4Q8IZF6 3080 aa4.92□□□□□ -1.62
ATXN1-201ENST00000244769 SPEGQ15772 3267 aa4.92□□□□□ -1.62
ATXN1-201ENST00000244769 KRTAP7-1Q8IUC3 87 aa4.9□□□□□ -1.63
ATXN1-201ENST00000244769 TENM1Q9UKZ4 2725 aa4.9□□□□□ -1.63
ATXN1-201ENST00000244769 DCHS2Q6V1P9 2916 aa4.89□□□□□ -1.63
ATXN1-201ENST00000244769 TENM4Q6N022 2769 aa4.89□□□□□ -1.63
ATXN1-201ENST00000244769 KRTAP13-2Q52LG2 175 aa4.88□□□□□ -1.63
ATXN1-201ENST00000244769 C10orf95Q9H7T3 257 aa4.88□□□□□ -1.63
ATXN1-201ENST00000244769 MXRA5Q9NR99 2828 aa4.86□□□□□ -1.63
ATXN1-201ENST00000244769 CFAP47Q6ZTR5 3102 aa4.85□□□□□ -1.63
ATXN1-201ENST00000244769 P0C880 135 aa4.85□□□□□ -1.63
ATXN1-201ENST00000244769 SZT2Q5T011 3432 aa4.85□□□□□ -1.63
ATXN1-201ENST00000244769 A6NN06 94 aa4.83□□□□□ -1.64
ATXN1-201ENST00000244769 CELSR1Q9NYQ6 3014 aa4.82□□□□□ -1.64
ATXN1-201ENST00000244769 XP32Q5T750 250 aa4.82□□□□□ -1.64
ATXN1-201ENST00000244769 A8MU10 97 aa4.81□□□□□ -1.64
ATXN1-201ENST00000244769 NDUFAF8A1L188 74 aa4.8□□□□□ -1.64
ATXN1-201ENST00000244769 SPTBN5Q9NRC6 3674 aaKnown RBP4.8□□□□□ -1.64
ATXN1-201ENST00000244769 KRTAP10-10P60014 251 aa4.79□□□□□ -1.64
ATXN1-201ENST00000244769 EYSQ5T1H1 3165 aa4.75□□□□□ -1.65
ATXN1-201ENST00000244769 VWFP04275 2813 aa4.74□□□□□ -1.65
ATXN1-201ENST00000244769 DMXL1Q9Y485 3027 aa4.71□□□□□ -1.66
ATXN1-201ENST00000244769 KRTAP1-4P0C5Y4 121 aa4.68□□□□□ -1.66
ATXN1-201ENST00000244769 NBPF19A0A087WUL8 3843 aa4.68□□□□□ -1.66
ATXN1-201ENST00000244769 TENM2Q9NT68 2774 aa4.65□□□□□ -1.67
ATXN1-201ENST00000244769 KRTAP13-3Q3SY46 172 aa4.64□□□□□ -1.67
ATXN1-201ENST00000244769 PDZD2O15018 2839 aa4.62□□□□□ -1.67
ATXN1-201ENST00000244769 LOC400499M0QZD8 3231 aa4.6□□□□□ -1.67
ATXN1-201ENST00000244769 PKD1L1Q8TDX9 2849 aa4.6□□□□□ -1.67
ATXN1-201ENST00000244769 TGP01266 2768 aa4.6□□□□□ -1.67
ATXN1-201ENST00000244769 A0A1B0GVY2 172 aa4.59□□□□□ -1.67
ATXN1-201ENST00000244769 WDFY3Q8IZQ1 3526 aa4.59□□□□□ -1.67
ATXN1-201ENST00000244769 H0YAA0 97 aa4.59□□□□□ -1.67
ATXN1-201ENST00000244769 ASPMQ8IZT6 3477 aa4.58□□□□□ -1.68
ATXN1-201ENST00000244769 MYO15AQ9UKN7 3530 aa4.57□□□□□ -1.68
ATXN1-201ENST00000244769 FBN1P35555 2871 aaKnown RBP4.55□□□□□ -1.68
ATXN1-201ENST00000244769 ZFHX4Q86UP3 3567 aa4.52□□□□□ -1.69
ATXN1-201ENST00000244769 KRTAP13-4Q3LI77 160 aa4.49□□□□□ -1.69
ATXN1-201ENST00000244769 ZFHX3Q15911 3703 aa4.47□□□□□ -1.69
ATXN1-201ENST00000244769 OTOGQ6ZRI0 2925 aa4.46□□□□□ -1.69
ATXN1-201ENST00000244769 DCHS1Q96JQ0 3298 aa4.46□□□□□ -1.7
ATXN1-201ENST00000244769 SRRM2Q9UQ35 2752 aaKnown RBP4.43□□□□□ -1.7
ATXN1-201ENST00000244769 LAMA5O15230 3695 aa4.4□□□□□ -1.71
ATXN1-201ENST00000244769 RELNP78509 3460 aa4.38□□□□□ -1.71
ATXN1-201ENST00000244769 FBN3Q75N90 2809 aa4.36□□□□□ -1.71
ATXN1-201ENST00000244769 KRTAP12-2P59991 146 aa4.36□□□□□ -1.71
ATXN1-201ENST00000244769 MEGF8Q7Z7M0 2845 aa4.35□□□□□ -1.71
ATXN1-201ENST00000244769 COL7A1Q02388 2944 aa4.31□□□□□ -1.72
ATXN1-201ENST00000244769 INE1O15225 51 aa4.3□□□□□ -1.72
ATXN1-201ENST00000244769 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
ATXN1-201ENST00000244769 DMDP11532 3685 aa4.26□□□□□ -1.73
ATXN1-201ENST00000244769 KRTAP12-1P59990 96 aa4.26□□□□□ -1.73
ATXN1-201ENST00000244769 SPENQ96T58 3664 aaKnown RBP4.24□□□□□ -1.73
ATXN1-201ENST00000244769 SMG1Q96Q15 3661 aaKnown RBP4.21□□□□□ -1.74
ATXN1-201ENST00000244769 CSMD1Q96PZ7 3565 aa4.19□□□□□ -1.74
ATXN1-201ENST00000244769 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
ATXN1-201ENST00000244769 MUC3AQ02505 3323 aa4.17□□□□□ -1.74
ATXN1-201ENST00000244769 KRTAP10-12P60413 245 aa4.15□□□□□ -1.75
ATXN1-201ENST00000244769 TRRAPQ9Y4A5 3859 aa4.12□□□□□ -1.75
ATXN1-201ENST00000244769 VPS13CQ709C8 3753 aa4.11□□□□□ -1.75
ATXN1-201ENST00000244769 AKAP9Q99996 3911 aa4.11□□□□□ -1.75
ATXN1-201ENST00000244769 CUBNO60494 3623 aa4.11□□□□□ -1.75
ATXN1-201ENST00000244769 KRTAP3-1Q9BYR8 98 aa4.09□□□□□ -1.76
ATXN1-201ENST00000244769 SVEP1Q4LDE5 3571 aa4.06□□□□□ -1.76
ATXN1-201ENST00000244769 BSNQ9UPA5 3926 aa4.01□□□□□ -1.77
ATXN1-201ENST00000244769 ANK3Q12955 4377 aaKnown RBP4□□□□□ -1.77
ATXN1-201ENST00000244769 CSMD2Q7Z408 3487 aa3.99□□□□□ -1.77
ATXN1-201ENST00000244769 KRTAP10-6P60371 365 aaPredicted RBP3.98□□□□□ -1.77
ATXN1-201ENST00000244769 KRTAP12-3P60328 96 aa3.96□□□□□ -1.77
ATXN1-201ENST00000244769 ALMS1Q8TCU4 4167 aa3.95□□□□□ -1.78
ATXN1-201ENST00000244769 KRTAP4-5Q9BYR2 181 aa3.93□□□□□ -1.78
ATXN1-201ENST00000244769 MT1HL1P0DM35 61 aa3.9□□□□□ -1.78
ATXN1-201ENST00000244769 CRCT1Q9UGL9 99 aa3.89□□□□□ -1.79
ATXN1-201ENST00000244769 KRTAP10-4P60372 401 aaPredicted RBP3.89□□□□□ -1.79
ATXN1-201ENST00000244769 KRTAP19-4Q3LI73 84 aa3.88□□□□□ -1.79
ATXN1-201ENST00000244769 KRTAP8-1Q8IUC2 63 aa3.87□□□□□ -1.79
ATXN1-201ENST00000244769 KRTAP3-2Q9BYR7 98 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms