RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 IGHV6-1A0A0B4J1U7 121 aa11.02□□□□□ -0.65
SNRPA-201ENST00000243563 A0A1B0GVX0 72 aa11.02□□□□□ -0.65
SNRPA-201ENST00000243563 A8MWP4 228 aa11.02□□□□□ -0.65
SNRPA-201ENST00000243563 Q8N9L7 120 aa11.02□□□□□ -0.65
SNRPA-201ENST00000243563 K7EQZ3 153 aa11□□□□□ -0.65
SNRPA-201ENST00000243563 J3QR89 54 aa10.99□□□□□ -0.65
SNRPA-201ENST00000243563 XP32Q5T750 250 aa10.98□□□□□ -0.65
SNRPA-201ENST00000243563 CDIP1Q9H305 208 aa10.97□□□□□ -0.65
SNRPA-201ENST00000243563 PRR15Q8IV56 129 aa10.96□□□□□ -0.65
SNRPA-201ENST00000243563 KRTAP16-1A8MUX0 517 aa10.94□□□□□ -0.66
SNRPA-201ENST00000243563 K7ERU9 68 aa10.93□□□□□ -0.66
SNRPA-201ENST00000243563 NDUFB1O75438 58 aa10.93□□□□□ -0.66
SNRPA-201ENST00000243563 LINC00313P59037 77 aa10.92□□□□□ -0.66
SNRPA-201ENST00000243563 C8orf17Q9NRJ1 99 aa10.91□□□□□ -0.66
SNRPA-201ENST00000243563 CXCL6P80162 114 aa10.91□□□□□ -0.66
SNRPA-201ENST00000243563 MMP24-AS1A0A0U1RRL7 71 aa10.89□□□□□ -0.67
SNRPA-201ENST00000243563 LINC00643Q86TS7 51 aa10.89□□□□□ -0.67
SNRPA-201ENST00000243563 C8orf87E5RJ46 101 aa10.88□□□□□ -0.67
SNRPA-201ENST00000243563 UBR4Q5T4S7 5183 aa10.84□□□□□ -0.67
SNRPA-201ENST00000243563 ATP5EP2Q5VTU8 51 aa10.84□□□□□ -0.67
SNRPA-201ENST00000243563 MUC17Q685J3 4493 aa10.83□□□□□ -0.68
SNRPA-201ENST00000243563 C20orf166-AS1Q96NR2 134 aa10.81□□□□□ -0.68
SNRPA-201ENST00000243563 RPL37P61927 97 aaKnown RBP10.8□□□□□ -0.68
SNRPA-201ENST00000243563 WFDC13Q8IUB5 93 aa10.8□□□□□ -0.68
SNRPA-201ENST00000243563 A8MUU9 505 aa10.8□□□□□ -0.68
SNRPA-201ENST00000243563 hDV103S1A0JD37 113 aa10.77□□□□□ -0.68
SNRPA-201ENST00000243563 Q75L30 129 aa10.77□□□□□ -0.68
SNRPA-201ENST00000243563 A0A087WVE0 104 aa10.76□□□□□ -0.69
SNRPA-201ENST00000243563 HIST1H4AP62805 103 aaKnown RBP10.76□□□□□ -0.69
SNRPA-201ENST00000243563 TMEM254Q8TBM7 123 aa10.76□□□□□ -0.69
SNRPA-201ENST00000243563 HCG22E2RYF7 251 aa10.75□□□□□ -0.69
SNRPA-201ENST00000243563 MT-ATP8P03928 68 aa10.75□□□□□ -0.69
SNRPA-201ENST00000243563 CASC2Q6XLA1 102 aa10.75□□□□□ -0.69
SNRPA-201ENST00000243563 Q8N9P0 234 aaPredicted RBP10.73□□□□□ -0.69
SNRPA-201ENST00000243563 MRPL34Q9BQ48 92 aaKnown RBP10.73□□□□□ -0.69
SNRPA-201ENST00000243563 PCOTHQ58A44 107 aa10.73□□□□□ -0.69
SNRPA-201ENST00000243563 KRTAP4-1Q9BYQ7 146 aa10.68□□□□□ -0.7
SNRPA-201ENST00000243563 SEC61BP60468 96 aaKnown RBP10.66□□□□□ -0.7
SNRPA-201ENST00000243563 RNF213Q63HN8 5207 aa10.66□□□□□ -0.7
SNRPA-201ENST00000243563 NDUFS5O43920 106 aa10.62□□□□□ -0.71
SNRPA-201ENST00000243563 ATP11AUNQ6ZP68 121 aa10.62□□□□□ -0.71
SNRPA-201ENST00000243563 ZCCHC13Q8WW36 166 aaKnown RBP10.58□□□□□ -0.72
SNRPA-201ENST00000243563 MUC2Q02817 5179 aa10.58□□□□□ -0.72
SNRPA-201ENST00000243563 Q5W150 140 aa10.57□□□□□ -0.72
SNRPA-201ENST00000243563 IMUPQ9GZP8 106 aa10.55□□□□□ -0.72
SNRPA-201ENST00000243563 FAM236AA0A1B0GUQ0 79 aa10.45□□□□□ -0.74
SNRPA-201ENST00000243563 FAM236BA0A1B0GV22 79 aa10.45□□□□□ -0.74
SNRPA-201ENST00000243563 OCR1Q9BZK8 76 aa10.44□□□□□ -0.74
SNRPA-201ENST00000243563 TP53AIP1Q9HCN2 124 aa10.44□□□□□ -0.74
SNRPA-201ENST00000243563 SPINK7P58062 85 aa10.38□□□□□ -0.75
SNRPA-201ENST00000243563 SCGB1A1P11684 91 aa10.36□□□□□ -0.75
SNRPA-201ENST00000243563 UQCRQO14949 82 aa10.36□□□□□ -0.75
SNRPA-201ENST00000243563 IGKV2D-30A0A075B6S6 120 aa10.34□□□□□ -0.75
SNRPA-201ENST00000243563 IGKV2-30P06310 120 aa10.34□□□□□ -0.75
SNRPA-201ENST00000243563 TRAV22A0A0B4J277 110 aa10.33□□□□□ -0.76
SNRPA-201ENST00000243563 HRES1P13985 223 aa10.33□□□□□ -0.76
SNRPA-201ENST00000243563 KRTAP19-2Q3LHN2 52 aa10.32□□□□□ -0.76
SNRPA-201ENST00000243563 H0Y9P7 68 aa10.3□□□□□ -0.76
SNRPA-201ENST00000243563 C7orf65Q6ZTY9 151 aa10.27□□□□□ -0.77
SNRPA-201ENST00000243563 MPLKIPQ8TAP9 179 aa10.25□□□□□ -0.77
SNRPA-201ENST00000243563 FAT4Q6V0I7 4981 aa10.25□□□□□ -0.77
SNRPA-201ENST00000243563 ATOX1O00244 68 aa10.23□□□□□ -0.77
SNRPA-201ENST00000243563 LCE2CQ5TA81 110 aa10.23□□□□□ -0.77
SNRPA-201ENST00000243563 TRAV7A0A075B6U4 112 aa10.22□□□□□ -0.77
SNRPA-201ENST00000243563 CYP4F30PQ9H0H9 118 aa10.21□□□□□ -0.78
SNRPA-201ENST00000243563 LINC00208Q96KT6 92 aa10.2□□□□□ -0.78
SNRPA-201ENST00000243563 C5orf47Q569G3 176 aa10.19□□□□□ -0.78
SNRPA-201ENST00000243563 SMIM20Q8N5G0 67 aa10.18□□□□□ -0.78
SNRPA-201ENST00000243563 C1orf64Q8NEQ6 169 aa10.18□□□□□ -0.78
SNRPA-201ENST00000243563 LOC101927531A0A1B0GV80 90 aa10.18□□□□□ -0.78
SNRPA-201ENST00000243563 MP68P56378 58 aa10.16□□□□□ -0.78
SNRPA-201ENST00000243563 C4orf26Q17RF5 130 aa10.12□□□□□ -0.79
SNRPA-201ENST00000243563 SERP2Q8N6R1 65 aa10.12□□□□□ -0.79
SNRPA-201ENST00000243563 KLKP1Q107X0 134 aa10.11□□□□□ -0.79
SNRPA-201ENST00000243563 COX6B2Q6YFQ2 88 aa10.09□□□□□ -0.79
SNRPA-201ENST00000243563 RBM12B-AS1Q9P1G2 102 aa10.09□□□□□ -0.79
SNRPA-201ENST00000243563 H3BPC8 53 aa10.07□□□□□ -0.8
SNRPA-201ENST00000243563 A0A0U1RQV1 116 aa10.07□□□□□ -0.8
SNRPA-201ENST00000243563 FLGP20930 4061 aaPredicted RBP10.07□□□□□ -0.8
SNRPA-201ENST00000243563 FAM236DA0A1B0GTK5 79 aa10.06□□□□□ -0.8
SNRPA-201ENST00000243563 FAM236CP0DP71 79 aa10.06□□□□□ -0.8
SNRPA-201ENST00000243563 KRTAP3-1Q9BYR8 98 aa10.04□□□□□ -0.8
SNRPA-201ENST00000243563 SNURFQ9Y675 71 aa10.04□□□□□ -0.8
SNRPA-201ENST00000243563 MT1HP80294 61 aa10.02□□□□□ -0.81
SNRPA-201ENST00000243563 C20orf197Q8N268 126 aa10.02□□□□□ -0.81
SNRPA-201ENST00000243563 COX7CP15954 63 aa10□□□□□ -0.81
SNRPA-201ENST00000243563 ANAPC13Q9BS18 74 aa10□□□□□ -0.81
SNRPA-201ENST00000243563 LCE2AQ5TA79 106 aaPredicted RBP9.98□□□□□ -0.81
SNRPA-201ENST00000243563 CYSTM1Q9H1C7 97 aa9.92□□□□□ -0.82
SNRPA-201ENST00000243563 H1FX-AS1Q4G0G2 97 aa9.91□□□□□ -0.82
SNRPA-201ENST00000243563 CCDC179H3BU77 68 aa9.86□□□□□ -0.83
SNRPA-201ENST00000243563 M0R2T5 61 aa9.78□□□□□ -0.84
SNRPA-201ENST00000243563 DMAC1Q96GE9 116 aa9.77□□□□□ -0.85
SNRPA-201ENST00000243563 H7BZZ5 65 aa9.74□□□□□ -0.85
SNRPA-201ENST00000243563 LCA10Q71F78 164 aa9.74□□□□□ -0.85
SNRPA-201ENST00000243563 S4R3F8 94 aa9.74□□□□□ -0.85
SNRPA-201ENST00000243563 A8MUN3 132 aa9.73□□□□□ -0.85
SNRPA-201ENST00000243563 KRTAP10-6P60371 365 aaPredicted RBP9.71□□□□□ -0.85
SNRPA-201ENST00000243563 KRTAP3-3Q9BYR6 98 aa9.71□□□□□ -0.85
SNRPA-201ENST00000243563 SPANXA2-OT1Q8N9U9 137 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms