RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 NBEAQ8NFP9 2946 aa7.9□□□□□ -1.14
NEK9-201ENST00000238616 Q8NDZ9 215 aa7.9□□□□□ -1.15
NEK9-201ENST00000238616 HIVEP1P15822 2718 aa7.89□□□□□ -1.15
NEK9-201ENST00000238616 CELSR1Q9NYQ6 3014 aa7.88□□□□□ -1.15
NEK9-201ENST00000238616 OXTP01178 125 aa7.87□□□□□ -1.15
NEK9-201ENST00000238616 LINC00472Q9H8W2 130 aa7.85□□□□□ -1.15
NEK9-201ENST00000238616 CELSR2Q9HCU4 2923 aa7.85□□□□□ -1.15
NEK9-201ENST00000238616 KRTAP1-5Q9BYS1 174 aa7.82□□□□□ -1.16
NEK9-201ENST00000238616 LCE6AA0A183 80 aa7.81□□□□□ -1.16
NEK9-201ENST00000238616 CYSTM1Q9H1C7 97 aa7.81□□□□□ -1.16
NEK9-201ENST00000238616 TENM1Q9UKZ4 2725 aa7.8□□□□□ -1.16
NEK9-201ENST00000238616 CSMD1Q96PZ7 3565 aa7.79□□□□□ -1.16
NEK9-201ENST00000238616 KRTAP26-1Q6PEX3 210 aa7.78□□□□□ -1.16
NEK9-201ENST00000238616 Q6ZR54 194 aa7.78□□□□□ -1.16
NEK9-201ENST00000238616 A8MUU9 505 aa7.77□□□□□ -1.17
NEK9-201ENST00000238616 Q5XG85 94 aa7.76□□□□□ -1.17
NEK9-201ENST00000238616 PANO1I0J062 215 aa7.76□□□□□ -1.17
NEK9-201ENST00000238616 FLNCQ14315 2725 aa7.75□□□□□ -1.17
NEK9-201ENST00000238616 SPRR1AP35321 89 aa7.74□□□□□ -1.17
NEK9-201ENST00000238616 SMG1Q96Q15 3661 aaKnown RBP7.74□□□□□ -1.17
NEK9-201ENST00000238616 A0A087X002 238 aa7.74□□□□□ -1.17
NEK9-201ENST00000238616 NF1P21359 2839 aa7.74□□□□□ -1.17
NEK9-201ENST00000238616 KRTAP16-1A8MUX0 517 aa7.72□□□□□ -1.17
NEK9-201ENST00000238616 DCHS2Q6V1P9 2916 aa7.7□□□□□ -1.18
NEK9-201ENST00000238616 DMDP11532 3685 aa7.7□□□□□ -1.18
NEK9-201ENST00000238616 NIPBLQ6KC79 2804 aaeCLIP7.68□□□□□ -1.18
NEK9-201ENST00000238616 SPRR1BP22528 89 aa7.68□□□□□ -1.18
NEK9-201ENST00000238616 C10orf95Q9H7T3 257 aa7.65□□□□□ -1.18
NEK9-201ENST00000238616 A8MU10 97 aa7.64□□□□□ -1.19
NEK9-201ENST00000238616 ZFHX3Q15911 3703 aa7.59□□□□□ -1.2
NEK9-201ENST00000238616 NOTCH2NLQ7Z3S9 236 aa7.56□□□□□ -1.2
NEK9-201ENST00000238616 CUBNO60494 3623 aa7.55□□□□□ -1.2
NEK9-201ENST00000238616 NDUFAF8A1L188 74 aa7.54□□□□□ -1.2
NEK9-201ENST00000238616 TNP1P09430 55 aa7.54□□□□□ -1.2
NEK9-201ENST00000238616 FBN2P35556 2912 aa7.5□□□□□ -1.21
NEK9-201ENST00000238616 KRTAP25-1Q3LHN0 102 aa7.5□□□□□ -1.21
NEK9-201ENST00000238616 KRTAP10-8P60410 259 aa7.5□□□□□ -1.21
NEK9-201ENST00000238616 VWFP04275 2813 aa7.48□□□□□ -1.21
NEK9-201ENST00000238616 A0A1B0GVY2 172 aa7.45□□□□□ -1.22
NEK9-201ENST00000238616 TENM3Q9P273 2699 aa7.45□□□□□ -1.22
NEK9-201ENST00000238616 PDZD2O15018 2839 aa7.44□□□□□ -1.22
NEK9-201ENST00000238616 PKD1L1Q8TDX9 2849 aa7.44□□□□□ -1.22
NEK9-201ENST00000238616 ZANQ9Y493 2812 aa7.4□□□□□ -1.22
NEK9-201ENST00000238616 KRTAP11-1Q8IUC1 163 aa7.39□□□□□ -1.23
NEK9-201ENST00000238616 KRTAP4-16G5E9R7 235 aaPredicted RBP7.39□□□□□ -1.23
NEK9-201ENST00000238616 ASB16-AS1Q495Z4 193 aa7.37□□□□□ -1.23
NEK9-201ENST00000238616 SVEP1Q4LDE5 3571 aa7.37□□□□□ -1.23
NEK9-201ENST00000238616 KRTAP29-1A8MX34 341 aaPredicted RBP7.35□□□□□ -1.23
NEK9-201ENST00000238616 TGP01266 2768 aa7.31□□□□□ -1.24
NEK9-201ENST00000238616 RPS29P62273 56 aaKnown RBP7.31□□□□□ -1.24
NEK9-201ENST00000238616 P0C880 135 aa7.28□□□□□ -1.24
NEK9-201ENST00000238616 CSMD2Q7Z408 3487 aa7.28□□□□□ -1.24
NEK9-201ENST00000238616 KRTAP13-2Q52LG2 175 aa7.27□□□□□ -1.25
NEK9-201ENST00000238616 TENM4Q6N022 2769 aa7.25□□□□□ -1.25
NEK9-201ENST00000238616 MXRA5Q9NR99 2828 aa7.23□□□□□ -1.25
NEK9-201ENST00000238616 VPS13CQ709C8 3753 aa7.23□□□□□ -1.25
NEK9-201ENST00000238616 KRTAP10-10P60014 251 aa7.23□□□□□ -1.25
NEK9-201ENST00000238616 Q6ZRN7 208 aaPredicted RBP7.22□□□□□ -1.25
NEK9-201ENST00000238616 A6NN06 94 aa7.21□□□□□ -1.25
NEK9-201ENST00000238616 TENM2Q9NT68 2774 aa7.19□□□□□ -1.26
NEK9-201ENST00000238616 MUC3AQ02505 3323 aa7.18□□□□□ -1.26
NEK9-201ENST00000238616 PRO2289Q9P1D8 64 aa7.17□□□□□ -1.26
NEK9-201ENST00000238616 SRRM2Q9UQ35 2752 aaKnown RBP7.16□□□□□ -1.26
NEK9-201ENST00000238616 COL7A1Q02388 2944 aa7.11□□□□□ -1.27
NEK9-201ENST00000238616 HRNRQ86YZ3 2850 aaPredicted RBP7.11□□□□□ -1.27
NEK9-201ENST00000238616 MEGF8Q7Z7M0 2845 aa7.1□□□□□ -1.27
NEK9-201ENST00000238616 PP632Q6XCG6 107 aa7.08□□□□□ -1.28
NEK9-201ENST00000238616 KRTAP7-1Q8IUC3 87 aa7.08□□□□□ -1.28
NEK9-201ENST00000238616 CSMD3Q7Z407 3707 aa7.05□□□□□ -1.28
NEK9-201ENST00000238616 XP32Q5T750 250 aa7.04□□□□□ -1.28
NEK9-201ENST00000238616 KRTAP13-1Q8IUC0 172 aa7□□□□□ -1.29
NEK9-201ENST00000238616 TRRAPQ9Y4A5 3859 aa6.94□□□□□ -1.3
NEK9-201ENST00000238616 H0YAA0 97 aa6.94□□□□□ -1.3
NEK9-201ENST00000238616 TPRXLQ17RH7 258 aa6.87□□□□□ -1.31
NEK9-201ENST00000238616 BSNQ9UPA5 3926 aa6.85□□□□□ -1.31
NEK9-201ENST00000238616 AKAP9Q99996 3911 aa6.83□□□□□ -1.32
NEK9-201ENST00000238616 KRTAP21-3Q3LHN1 58 aa6.76□□□□□ -1.33
NEK9-201ENST00000238616 KRTAP1-4P0C5Y4 121 aa6.75□□□□□ -1.33
NEK9-201ENST00000238616 FBN1P35555 2871 aaKnown RBP6.75□□□□□ -1.33
NEK9-201ENST00000238616 KRTAP12-2P59991 146 aa6.68□□□□□ -1.34
NEK9-201ENST00000238616 KRTAP13-3Q3SY46 172 aa6.67□□□□□ -1.34
NEK9-201ENST00000238616 OTOGQ6ZRI0 2925 aa6.62□□□□□ -1.35
NEK9-201ENST00000238616 FBN3Q75N90 2809 aa6.61□□□□□ -1.35
NEK9-201ENST00000238616 CRCT1Q9UGL9 99 aa6.55□□□□□ -1.36
NEK9-201ENST00000238616 KRTAP15-1Q3LI76 137 aa6.54□□□□□ -1.36
NEK9-201ENST00000238616 ZNF469Q96JG9 3925 aaPredicted RBP6.48□□□□□ -1.37
NEK9-201ENST00000238616 KRTAP13-4Q3LI77 160 aa6.46□□□□□ -1.38
NEK9-201ENST00000238616 KRTAP12-1P59990 96 aa6.34□□□□□ -1.4
NEK9-201ENST00000238616 LYSTQ99698 3801 aa6.29□□□□□ -1.4
NEK9-201ENST00000238616 FRAS1Q86XX4 4008 aa6.17□□□□□ -1.42
NEK9-201ENST00000238616 KRTAP10-12P60413 245 aa6.1□□□□□ -1.43
NEK9-201ENST00000238616 KRTAP3-1Q9BYR8 98 aa6□□□□□ -1.45
NEK9-201ENST00000238616 CMYA5Q8N3K9 4069 aa5.99□□□□□ -1.45
NEK9-201ENST00000238616 ANK2Q01484 3957 aa5.98□□□□□ -1.45
NEK9-201ENST00000238616 INE1O15225 51 aa5.96□□□□□ -1.45
NEK9-201ENST00000238616 KMT2AQ03164 3969 aa5.96□□□□□ -1.46
NEK9-201ENST00000238616 ANK3Q12955 4377 aaKnown RBP5.92□□□□□ -1.46
NEK9-201ENST00000238616 KRTAP10-5P60370 271 aa5.87□□□□□ -1.47
NEK9-201ENST00000238616 KRTAP10-6P60371 365 aaPredicted RBP5.86□□□□□ -1.47
NEK9-201ENST00000238616 HUWE1Q7Z6Z7 4374 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms