RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 NBEAQ8NFP9 2946 aa4.01□□□□□ -1.77
MED28-201ENST00000237380 ZZEF1O43149 2961 aa4□□□□□ -1.77
MED28-201ENST00000237380 RANBP2P49792 3224 aaKnown RBP4□□□□□ -1.77
MED28-201ENST00000237380 TENM4Q6N022 2769 aa4□□□□□ -1.77
MED28-201ENST00000237380 MXRA5Q9NR99 2828 aa3.99□□□□□ -1.77
MED28-201ENST00000237380 TNRC18O15417 2968 aaPredicted RBP3.99□□□□□ -1.77
MED28-201ENST00000237380 HRNRQ86YZ3 2850 aaPredicted RBP3.99□□□□□ -1.77
MED28-201ENST00000237380 TRIOO75962 3097 aa3.98□□□□□ -1.77
MED28-201ENST00000237380 USP34Q70CQ2 3546 aa3.97□□□□□ -1.77
MED28-201ENST00000237380 PRUNE2Q8WUY3 3088 aa3.95□□□□□ -1.78
MED28-201ENST00000237380 DCHS2Q6V1P9 2916 aa3.95□□□□□ -1.78
MED28-201ENST00000237380 WDFY4Q6ZS81 3184 aa3.94□□□□□ -1.78
MED28-201ENST00000237380 A8MU10 97 aa3.93□□□□□ -1.78
MED28-201ENST00000237380 KRTAP11-1Q8IUC1 163 aa3.93□□□□□ -1.78
MED28-201ENST00000237380 KRTAP7-1Q8IUC3 87 aa3.91□□□□□ -1.78
MED28-201ENST00000237380 ASH1LQ9NR48 2969 aaKnown RBP3.91□□□□□ -1.78
MED28-201ENST00000237380 TGP01266 2768 aa3.91□□□□□ -1.78
MED28-201ENST00000237380 PDZD2O15018 2839 aa3.89□□□□□ -1.79
MED28-201ENST00000237380 ADGRG4Q8IZF6 3080 aa3.89□□□□□ -1.79
MED28-201ENST00000237380 KRTAP13-3Q3SY46 172 aa3.88□□□□□ -1.79
MED28-201ENST00000237380 LAMA3Q16787 3333 aa3.87□□□□□ -1.79
MED28-201ENST00000237380 MKI67P46013 3256 aaKnown RBP3.87□□□□□ -1.79
MED28-201ENST00000237380 KRTAP1-4P0C5Y4 121 aa3.87□□□□□ -1.79
MED28-201ENST00000237380 A0A1B0GVY2 172 aa3.86□□□□□ -1.79
MED28-201ENST00000237380 BRCA2P51587 3418 aa3.86□□□□□ -1.79
MED28-201ENST00000237380 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
MED28-201ENST00000237380 COL12A1Q99715 3063 aa3.85□□□□□ -1.79
MED28-201ENST00000237380 FBN2P35556 2912 aa3.85□□□□□ -1.79
MED28-201ENST00000237380 ATMQ13315 3056 aa3.84□□□□□ -1.79
MED28-201ENST00000237380 XIRP2A4UGR9 3374 aa3.84□□□□□ -1.79
MED28-201ENST00000237380 LAMA1P25391 3075 aa3.82□□□□□ -1.8
MED28-201ENST00000237380 H0YAA0 97 aa3.82□□□□□ -1.8
MED28-201ENST00000237380 UNC80Q8N2C7 3258 aa3.81□□□□□ -1.8
MED28-201ENST00000237380 VWFP04275 2813 aa3.81□□□□□ -1.8
MED28-201ENST00000237380 BOD1L1Q8NFC6 3051 aa3.8□□□□□ -1.8
MED28-201ENST00000237380 DMXL2Q8TDJ6 3036 aa3.79□□□□□ -1.8
MED28-201ENST00000237380 CRYBG3Q68DQ2 2970 aa3.79□□□□□ -1.8
MED28-201ENST00000237380 VCANP13611 3396 aa3.78□□□□□ -1.8
MED28-201ENST00000237380 CELSR1Q9NYQ6 3014 aa3.78□□□□□ -1.8
MED28-201ENST00000237380 DNAH14Q0VDD8 3507 aa3.77□□□□□ -1.81
MED28-201ENST00000237380 TENM2Q9NT68 2774 aa3.74□□□□□ -1.81
MED28-201ENST00000237380 CDH23Q9H251 3354 aa3.74□□□□□ -1.81
MED28-201ENST00000237380 KRTAP13-4Q3LI77 160 aa3.72□□□□□ -1.81
MED28-201ENST00000237380 FREM2Q5SZK8 3169 aa3.71□□□□□ -1.82
MED28-201ENST00000237380 DMXL1Q9Y485 3027 aa3.69□□□□□ -1.82
MED28-201ENST00000237380 CELSR3Q9NYQ7 3312 aa3.69□□□□□ -1.82
MED28-201ENST00000237380 REV3LO60673 3130 aa3.67□□□□□ -1.82
MED28-201ENST00000237380 PKD1L1Q8TDX9 2849 aa3.67□□□□□ -1.82
MED28-201ENST00000237380 SPTBN5Q9NRC6 3674 aaKnown RBP3.64□□□□□ -1.83
MED28-201ENST00000237380 WDFY3Q8IZQ1 3526 aa3.64□□□□□ -1.83
MED28-201ENST00000237380 SRRM2Q9UQ35 2752 aaKnown RBP3.63□□□□□ -1.83
MED28-201ENST00000237380 COL6A3P12111 3177 aa3.62□□□□□ -1.83
MED28-201ENST00000237380 SZT2Q5T011 3432 aa3.61□□□□□ -1.83
MED28-201ENST00000237380 MEGF8Q7Z7M0 2845 aa3.61□□□□□ -1.83
MED28-201ENST00000237380 KRTAP12-2P59991 146 aa3.6□□□□□ -1.83
MED28-201ENST00000237380 KRTAP15-1Q3LI76 137 aa3.6□□□□□ -1.83
MED28-201ENST00000237380 CFAP47Q6ZTR5 3102 aa3.59□□□□□ -1.84
MED28-201ENST00000237380 COL7A1Q02388 2944 aa3.56□□□□□ -1.84
MED28-201ENST00000237380 DMDP11532 3685 aa3.56□□□□□ -1.84
MED28-201ENST00000237380 EYSQ5T1H1 3165 aa3.55□□□□□ -1.84
MED28-201ENST00000237380 MYO15AQ9UKN7 3530 aa3.55□□□□□ -1.84
MED28-201ENST00000237380 KRTAP23-1A1A580 65 aa3.55□□□□□ -1.84
MED28-201ENST00000237380 INE1O15225 51 aa3.54□□□□□ -1.84
MED28-201ENST00000237380 FBN1P35555 2871 aaKnown RBP3.54□□□□□ -1.84
MED28-201ENST00000237380 SPEGQ15772 3267 aa3.48□□□□□ -1.85
MED28-201ENST00000237380 KRTAP12-1P59990 96 aa3.48□□□□□ -1.85
MED28-201ENST00000237380 FBN3Q75N90 2809 aa3.48□□□□□ -1.85
MED28-201ENST00000237380 NBPF19A0A087WUL8 3843 aa3.46□□□□□ -1.85
MED28-201ENST00000237380 KRTAP10-12P60413 245 aa3.46□□□□□ -1.86
MED28-201ENST00000237380 LOC400499M0QZD8 3231 aa3.46□□□□□ -1.86
MED28-201ENST00000237380 OTOGQ6ZRI0 2925 aa3.45□□□□□ -1.86
MED28-201ENST00000237380 LAMA5O15230 3695 aa3.42□□□□□ -1.86
MED28-201ENST00000237380 ASPMQ8IZT6 3477 aa3.42□□□□□ -1.86
MED28-201ENST00000237380 SPENQ96T58 3664 aaKnown RBP3.39□□□□□ -1.87
MED28-201ENST00000237380 KRTAP19-4Q3LI73 84 aa3.39□□□□□ -1.87
MED28-201ENST00000237380 ZFHX3Q15911 3703 aa3.36□□□□□ -1.87
MED28-201ENST00000237380 SMG1Q96Q15 3661 aaKnown RBP3.36□□□□□ -1.87
MED28-201ENST00000237380 ALMS1Q8TCU4 4167 aa3.35□□□□□ -1.87
MED28-201ENST00000237380 KRTAP3-1Q9BYR8 98 aa3.34□□□□□ -1.88
MED28-201ENST00000237380 KRTAP10-6P60371 365 aaPredicted RBP3.33□□□□□ -1.88
MED28-201ENST00000237380 ZFHX4Q86UP3 3567 aa3.32□□□□□ -1.88
MED28-201ENST00000237380 RELNP78509 3460 aa3.32□□□□□ -1.88
MED28-201ENST00000237380 DCHS1Q96JQ0 3298 aa3.32□□□□□ -1.88
MED28-201ENST00000237380 CSMD1Q96PZ7 3565 aa3.3□□□□□ -1.88
MED28-201ENST00000237380 KRTAP8-1Q8IUC2 63 aa3.28□□□□□ -1.88
MED28-201ENST00000237380 KRTAP12-3P60328 96 aa3.28□□□□□ -1.88
MED28-201ENST00000237380 MT1HL1P0DM35 61 aa3.27□□□□□ -1.89
MED28-201ENST00000237380 CRCT1Q9UGL9 99 aa3.25□□□□□ -1.89
MED28-201ENST00000237380 KRTAP3-2Q9BYR7 98 aa3.21□□□□□ -1.89
MED28-201ENST00000237380 HUWE1Q7Z6Z7 4374 aaKnown RBP3.19□□□□□ -1.9
MED28-201ENST00000237380 DNAH1Q9P2D7 4330 aa3.19□□□□□ -1.9
MED28-201ENST00000237380 KRTAP3-3Q9BYR6 98 aa3.17□□□□□ -1.9
MED28-201ENST00000237380 BSNQ9UPA5 3926 aa3.16□□□□□ -1.9
MED28-201ENST00000237380 TRRAPQ9Y4A5 3859 aa3.15□□□□□ -1.91
MED28-201ENST00000237380 KRTAP10-7P60409 375 aaPredicted RBP3.14□□□□□ -1.91
MED28-201ENST00000237380 MUC3AQ02505 3323 aa3.14□□□□□ -1.91
MED28-201ENST00000237380 AKAP9Q99996 3911 aa3.13□□□□□ -1.91
MED28-201ENST00000237380 VPS13CQ709C8 3753 aa3.13□□□□□ -1.91
MED28-201ENST00000237380 KRTAP10-4P60372 401 aaPredicted RBP3.13□□□□□ -1.91
MED28-201ENST00000237380 SVEP1Q4LDE5 3571 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms