RNA–Protein interactions for RNA: ENST00000234142.9

GREB1-201, Transcript of growth regulating estrogen receptor binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GREB1, Length 8,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-201ENST00000234142 CHD7Q9P2D1 2997 aa6.28□□□□□ -1.4
GREB1-201ENST00000234142 XP32Q5T750 250 aa6.27□□□□□ -1.41
GREB1-201ENST00000234142 MKI67P46013 3256 aaKnown RBP6.26□□□□□ -1.41
GREB1-201ENST00000234142 HIVEP1P15822 2718 aa6.26□□□□□ -1.41
GREB1-201ENST00000234142 KRTAP10-10P60014 251 aa6.26□□□□□ -1.41
GREB1-201ENST00000234142 TPRXLQ17RH7 258 aa6.25□□□□□ -1.41
GREB1-201ENST00000234142 FLNCQ14315 2725 aa6.25□□□□□ -1.41
GREB1-201ENST00000234142 UNC80Q8N2C7 3258 aa6.23□□□□□ -1.41
GREB1-201ENST00000234142 A0A1B0GVY2 172 aa6.22□□□□□ -1.41
GREB1-201ENST00000234142 DNAH14Q0VDD8 3507 aa6.22□□□□□ -1.41
GREB1-201ENST00000234142 PRUNE2Q8WUY3 3088 aa6.21□□□□□ -1.42
GREB1-201ENST00000234142 DMXL2Q8TDJ6 3036 aa6.19□□□□□ -1.42
GREB1-201ENST00000234142 NF1P21359 2839 aa6.19□□□□□ -1.42
GREB1-201ENST00000234142 CHD9Q3L8U1 2897 aa6.19□□□□□ -1.42
GREB1-201ENST00000234142 COL12A1Q99715 3063 aa6.18□□□□□ -1.42
GREB1-201ENST00000234142 CDH23Q9H251 3354 aa6.18□□□□□ -1.42
GREB1-201ENST00000234142 KRTAP21-3Q3LHN1 58 aa6.18□□□□□ -1.42
GREB1-201ENST00000234142 TGP01266 2768 aa6.16□□□□□ -1.42
GREB1-201ENST00000234142 CELSR2Q9HCU4 2923 aa6.14□□□□□ -1.43
GREB1-201ENST00000234142 LAMA3Q16787 3333 aa6.11□□□□□ -1.43
GREB1-201ENST00000234142 NIPBLQ6KC79 2804 aaeCLIP6.11□□□□□ -1.43
GREB1-201ENST00000234142 HTTP42858 3142 aa6.07□□□□□ -1.44
GREB1-201ENST00000234142 KRTAP1-4P0C5Y4 121 aa6.07□□□□□ -1.44
GREB1-201ENST00000234142 PDZD2O15018 2839 aa6.05□□□□□ -1.44
GREB1-201ENST00000234142 LAMA1P25391 3075 aa6.04□□□□□ -1.44
GREB1-201ENST00000234142 TENM4Q6N022 2769 aa6.03□□□□□ -1.44
GREB1-201ENST00000234142 BRCA2P51587 3418 aa6.02□□□□□ -1.45
GREB1-201ENST00000234142 TACC2O95359 2948 aa6.01□□□□□ -1.45
GREB1-201ENST00000234142 NBEAQ8NFP9 2946 aa6.01□□□□□ -1.45
GREB1-201ENST00000234142 KRTAP13-4Q3LI77 160 aa5.99□□□□□ -1.45
GREB1-201ENST00000234142 KRTAP13-3Q3SY46 172 aa5.99□□□□□ -1.45
GREB1-201ENST00000234142 DCHS2Q6V1P9 2916 aa5.97□□□□□ -1.45
GREB1-201ENST00000234142 TNRC18O15417 2968 aaPredicted RBP5.97□□□□□ -1.45
GREB1-201ENST00000234142 KRTAP12-2P59991 146 aa5.97□□□□□ -1.45
GREB1-201ENST00000234142 COL6A3P12111 3177 aa5.96□□□□□ -1.45
GREB1-201ENST00000234142 ZZEF1O43149 2961 aa5.94□□□□□ -1.46
GREB1-201ENST00000234142 BOD1L1Q8NFC6 3051 aa5.94□□□□□ -1.46
GREB1-201ENST00000234142 DMXL1Q9Y485 3027 aa5.92□□□□□ -1.46
GREB1-201ENST00000234142 ATMQ13315 3056 aa5.89□□□□□ -1.47
GREB1-201ENST00000234142 CFAP47Q6ZTR5 3102 aa5.87□□□□□ -1.47
GREB1-201ENST00000234142 VCANP13611 3396 aa5.87□□□□□ -1.47
GREB1-201ENST00000234142 CELSR1Q9NYQ6 3014 aa5.87□□□□□ -1.47
GREB1-201ENST00000234142 USP34Q70CQ2 3546 aa5.86□□□□□ -1.47
GREB1-201ENST00000234142 KRTAP15-1Q3LI76 137 aa5.85□□□□□ -1.47
GREB1-201ENST00000234142 INE1O15225 51 aa5.84□□□□□ -1.47
GREB1-201ENST00000234142 SPEGQ15772 3267 aa5.84□□□□□ -1.47
GREB1-201ENST00000234142 ADGRG4Q8IZF6 3080 aa5.84□□□□□ -1.48
GREB1-201ENST00000234142 SZT2Q5T011 3432 aa5.83□□□□□ -1.48
GREB1-201ENST00000234142 WDFY3Q8IZQ1 3526 aa5.81□□□□□ -1.48
GREB1-201ENST00000234142 KRTAP12-1P59990 96 aa5.77□□□□□ -1.48
GREB1-201ENST00000234142 VWFP04275 2813 aa5.76□□□□□ -1.49
GREB1-201ENST00000234142 PKD1L1Q8TDX9 2849 aa5.76□□□□□ -1.49
GREB1-201ENST00000234142 ZANQ9Y493 2812 aa5.73□□□□□ -1.49
GREB1-201ENST00000234142 FBN2P35556 2912 aa5.72□□□□□ -1.49
GREB1-201ENST00000234142 MYO15AQ9UKN7 3530 aa5.71□□□□□ -1.5
GREB1-201ENST00000234142 SRRM2Q9UQ35 2752 aaKnown RBP5.68□□□□□ -1.5
GREB1-201ENST00000234142 TENM2Q9NT68 2774 aa5.67□□□□□ -1.5
GREB1-201ENST00000234142 ASPMQ8IZT6 3477 aa5.67□□□□□ -1.5
GREB1-201ENST00000234142 SPTBN5Q9NRC6 3674 aaKnown RBP5.62□□□□□ -1.51
GREB1-201ENST00000234142 MXRA5Q9NR99 2828 aa5.59□□□□□ -1.51
GREB1-201ENST00000234142 DCHS1Q96JQ0 3298 aa5.57□□□□□ -1.52
GREB1-201ENST00000234142 COL7A1Q02388 2944 aa5.55□□□□□ -1.52
GREB1-201ENST00000234142 ZFHX4Q86UP3 3567 aa5.53□□□□□ -1.52
GREB1-201ENST00000234142 HRNRQ86YZ3 2850 aaPredicted RBP5.53□□□□□ -1.52
GREB1-201ENST00000234142 EYSQ5T1H1 3165 aa5.52□□□□□ -1.53
GREB1-201ENST00000234142 LOC400499M0QZD8 3231 aa5.5□□□□□ -1.53
GREB1-201ENST00000234142 LAMA5O15230 3695 aa5.49□□□□□ -1.53
GREB1-201ENST00000234142 MEGF8Q7Z7M0 2845 aa5.47□□□□□ -1.53
GREB1-201ENST00000234142 KRTAP10-12P60413 245 aa5.47□□□□□ -1.53
GREB1-201ENST00000234142 CSMD1Q96PZ7 3565 aa5.43□□□□□ -1.54
GREB1-201ENST00000234142 NBPF19A0A087WUL8 3843 aa5.42□□□□□ -1.54
GREB1-201ENST00000234142 KRTAP3-1Q9BYR8 98 aa5.41□□□□□ -1.54
GREB1-201ENST00000234142 RELNP78509 3460 aa5.4□□□□□ -1.54
GREB1-201ENST00000234142 CRCT1Q9UGL9 99 aa5.39□□□□□ -1.55
GREB1-201ENST00000234142 KRTAP10-6P60371 365 aaPredicted RBP5.39□□□□□ -1.55
GREB1-201ENST00000234142 DMDP11532 3685 aa5.38□□□□□ -1.55
GREB1-201ENST00000234142 KRTAP23-1A1A580 65 aa5.35□□□□□ -1.55
GREB1-201ENST00000234142 FBN3Q75N90 2809 aa5.32□□□□□ -1.56
GREB1-201ENST00000234142 KRTAP12-3P60328 96 aa5.28□□□□□ -1.56
GREB1-201ENST00000234142 SMG1Q96Q15 3661 aaKnown RBP5.28□□□□□ -1.56
GREB1-201ENST00000234142 CUBNO60494 3623 aa5.28□□□□□ -1.56
GREB1-201ENST00000234142 MUC3AQ02505 3323 aa5.27□□□□□ -1.57
GREB1-201ENST00000234142 ZFHX3Q15911 3703 aa5.26□□□□□ -1.57
GREB1-201ENST00000234142 SPENQ96T58 3664 aaKnown RBP5.24□□□□□ -1.57
GREB1-201ENST00000234142 SVEP1Q4LDE5 3571 aa5.12□□□□□ -1.59
GREB1-201ENST00000234142 KRTAP10-5P60370 271 aa5.12□□□□□ -1.59
GREB1-201ENST00000234142 FBN1P35555 2871 aaKnown RBP5.11□□□□□ -1.59
GREB1-201ENST00000234142 KRTAP3-2Q9BYR7 98 aa5.1□□□□□ -1.59
GREB1-201ENST00000234142 LCE3AQ5TA76 89 aa5.08□□□□□ -1.6
GREB1-201ENST00000234142 KRTAP3-3Q9BYR6 98 aa5.07□□□□□ -1.6
GREB1-201ENST00000234142 OTOGQ6ZRI0 2925 aa5.02□□□□□ -1.61
GREB1-201ENST00000234142 KRTAP8-1Q8IUC2 63 aa5.01□□□□□ -1.61
GREB1-201ENST00000234142 MT1HL1P0DM35 61 aa4.97□□□□□ -1.61
GREB1-201ENST00000234142 CSMD2Q7Z408 3487 aa4.93□□□□□ -1.62
GREB1-201ENST00000234142 VPS13CQ709C8 3753 aa4.91□□□□□ -1.62
GREB1-201ENST00000234142 TRRAPQ9Y4A5 3859 aa4.91□□□□□ -1.62
GREB1-201ENST00000234142 CSMD3Q7Z407 3707 aa4.81□□□□□ -1.64
GREB1-201ENST00000234142 BSNQ9UPA5 3926 aa4.79□□□□□ -1.64
GREB1-201ENST00000234142 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
GREB1-201ENST00000234142 AKAP9Q99996 3911 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms