RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 KRTAP13-3Q3SY46 172 aa7.75□□□□□ -1.17
SEC61B-201ENST00000223641 LINC00643Q86TS7 51 aa7.75□□□□□ -1.17
SEC61B-201ENST00000223641 A0A1B0GVX0 72 aa7.74□□□□□ -1.17
SEC61B-201ENST00000223641 LPAP08519 4548 aa7.73□□□□□ -1.17
SEC61B-201ENST00000223641 NDUFB1O75438 58 aa7.73□□□□□ -1.17
SEC61B-201ENST00000223641 PRR15Q8IV56 129 aa7.73□□□□□ -1.17
SEC61B-201ENST00000223641 HMCN2Q8NDA2 5059 aa7.73□□□□□ -1.17
SEC61B-201ENST00000223641 K7EQZ3 153 aa7.72□□□□□ -1.17
SEC61B-201ENST00000223641 ATP5EP2Q5VTU8 51 aa7.72□□□□□ -1.17
SEC61B-201ENST00000223641 IGHV6-1A0A0B4J1U7 121 aa7.7□□□□□ -1.18
SEC61B-201ENST00000223641 C8orf87E5RJ46 101 aa7.69□□□□□ -1.18
SEC61B-201ENST00000223641 NOTCH2NLQ7Z3S9 236 aa7.69□□□□□ -1.18
SEC61B-201ENST00000223641 LINC00313P59037 77 aa7.68□□□□□ -1.18
SEC61B-201ENST00000223641 Q8N9L7 120 aa7.68□□□□□ -1.18
SEC61B-201ENST00000223641 C9orf92A6NGG3 77 aa7.67□□□□□ -1.18
SEC61B-201ENST00000223641 KRTAP16-1A8MUX0 517 aa7.66□□□□□ -1.18
SEC61B-201ENST00000223641 C8orf17Q9NRJ1 99 aa7.66□□□□□ -1.18
SEC61B-201ENST00000223641 MMP24-AS1A0A0U1RRL7 71 aa7.65□□□□□ -1.18
SEC61B-201ENST00000223641 KRTAP3-3Q9BYR6 98 aa7.65□□□□□ -1.18
SEC61B-201ENST00000223641 KRTAP3-2Q9BYR7 98 aa7.65□□□□□ -1.18
SEC61B-201ENST00000223641 XP32Q5T750 250 aa7.64□□□□□ -1.19
SEC61B-201ENST00000223641 LRP2P98164 4655 aa7.64□□□□□ -1.19
SEC61B-201ENST00000223641 C20orf166-AS1Q96NR2 134 aa7.6□□□□□ -1.19
SEC61B-201ENST00000223641 hDV103S1A0JD37 113 aa7.59□□□□□ -1.19
SEC61B-201ENST00000223641 A8MUU9 505 aa7.59□□□□□ -1.19
SEC61B-201ENST00000223641 TMEM254Q8TBM7 123 aa7.59□□□□□ -1.19
SEC61B-201ENST00000223641 HCG22E2RYF7 251 aa7.58□□□□□ -1.2
SEC61B-201ENST00000223641 MT-ATP8P03928 68 aa7.58□□□□□ -1.2
SEC61B-201ENST00000223641 HIST1H4AP62805 103 aaKnown RBP7.58□□□□□ -1.2
SEC61B-201ENST00000223641 Q8N9P0 234 aaPredicted RBP7.58□□□□□ -1.2
SEC61B-201ENST00000223641 IMUPQ9GZP8 106 aa7.58□□□□□ -1.2
SEC61B-201ENST00000223641 Q75L30 129 aa7.57□□□□□ -1.2
SEC61B-201ENST00000223641 MRPL34Q9BQ48 92 aaKnown RBP7.57□□□□□ -1.2
SEC61B-201ENST00000223641 CASC2Q6XLA1 102 aa7.56□□□□□ -1.2
SEC61B-201ENST00000223641 A0A087WVE0 104 aa7.55□□□□□ -1.2
SEC61B-201ENST00000223641 RPL37P61927 97 aaKnown RBP7.55□□□□□ -1.2
SEC61B-201ENST00000223641 WFDC13Q8IUB5 93 aa7.55□□□□□ -1.2
SEC61B-201ENST00000223641 MUC17Q685J3 4493 aa7.54□□□□□ -1.2
SEC61B-201ENST00000223641 SEC61BP60468 96 aaKnown RBP7.46□□□□□ -1.22
SEC61B-201ENST00000223641 NDUFS5O43920 106 aa7.44□□□□□ -1.22
SEC61B-201ENST00000223641 ATP11AUNQ6ZP68 121 aa7.44□□□□□ -1.22
SEC61B-201ENST00000223641 PCOTHQ58A44 107 aa7.43□□□□□ -1.22
SEC61B-201ENST00000223641 ZCCHC13Q8WW36 166 aaKnown RBP7.43□□□□□ -1.22
SEC61B-201ENST00000223641 TP53AIP1Q9HCN2 124 aa7.43□□□□□ -1.22
SEC61B-201ENST00000223641 UBR4Q5T4S7 5183 aa7.4□□□□□ -1.22
SEC61B-201ENST00000223641 FAM236AA0A1B0GUQ0 79 aa7.39□□□□□ -1.23
SEC61B-201ENST00000223641 FAM236BA0A1B0GV22 79 aa7.39□□□□□ -1.23
SEC61B-201ENST00000223641 Q5W150 140 aa7.39□□□□□ -1.23
SEC61B-201ENST00000223641 OCR1Q9BZK8 76 aa7.39□□□□□ -1.23
SEC61B-201ENST00000223641 UQCRQO14949 82 aa7.35□□□□□ -1.23
SEC61B-201ENST00000223641 KRTAP4-1Q9BYQ7 146 aa7.35□□□□□ -1.23
SEC61B-201ENST00000223641 SCGB1A1P11684 91 aa7.34□□□□□ -1.23
SEC61B-201ENST00000223641 TRAV22A0A0B4J277 110 aa7.31□□□□□ -1.24
SEC61B-201ENST00000223641 ATOX1O00244 68 aa7.31□□□□□ -1.24
SEC61B-201ENST00000223641 SMIM20Q8N5G0 67 aa7.3□□□□□ -1.24
SEC61B-201ENST00000223641 MUC2Q02817 5179 aa7.29□□□□□ -1.24
SEC61B-201ENST00000223641 TRAV7A0A075B6U4 112 aa7.28□□□□□ -1.24
SEC61B-201ENST00000223641 SPINK7P58062 85 aa7.27□□□□□ -1.25
SEC61B-201ENST00000223641 C5orf47Q569G3 176 aa7.27□□□□□ -1.25
SEC61B-201ENST00000223641 RNF213Q63HN8 5207 aa7.26□□□□□ -1.25
SEC61B-201ENST00000223641 H0Y9P7 68 aa7.25□□□□□ -1.25
SEC61B-201ENST00000223641 IGKV2-30P06310 120 aa7.25□□□□□ -1.25
SEC61B-201ENST00000223641 C7orf65Q6ZTY9 151 aa7.23□□□□□ -1.25
SEC61B-201ENST00000223641 IGKV2D-30A0A075B6S6 120 aa7.21□□□□□ -1.26
SEC61B-201ENST00000223641 LOC101927531A0A1B0GV80 90 aa7.21□□□□□ -1.26
SEC61B-201ENST00000223641 H3BPC8 53 aa7.21□□□□□ -1.26
SEC61B-201ENST00000223641 HRES1P13985 223 aa7.21□□□□□ -1.26
SEC61B-201ENST00000223641 MP68P56378 58 aa7.21□□□□□ -1.26
SEC61B-201ENST00000223641 SERP2Q8N6R1 65 aa7.21□□□□□ -1.26
SEC61B-201ENST00000223641 CYP4F30PQ9H0H9 118 aa7.2□□□□□ -1.26
SEC61B-201ENST00000223641 C1orf64Q8NEQ6 169 aa7.19□□□□□ -1.26
SEC61B-201ENST00000223641 MPLKIPQ8TAP9 179 aa7.19□□□□□ -1.26
SEC61B-201ENST00000223641 LINC00208Q96KT6 92 aa7.19□□□□□ -1.26
SEC61B-201ENST00000223641 KRTAP19-2Q3LHN2 52 aa7.16□□□□□ -1.26
SEC61B-201ENST00000223641 COX7CP15954 63 aa7.14□□□□□ -1.27
SEC61B-201ENST00000223641 A0A0U1RQV1 116 aa7.13□□□□□ -1.27
SEC61B-201ENST00000223641 ANAPC13Q9BS18 74 aa7.11□□□□□ -1.27
SEC61B-201ENST00000223641 KLKP1Q107X0 134 aa7.09□□□□□ -1.27
SEC61B-201ENST00000223641 LCE2CQ5TA81 110 aa7.08□□□□□ -1.28
SEC61B-201ENST00000223641 C20orf197Q8N268 126 aa7.08□□□□□ -1.28
SEC61B-201ENST00000223641 RBM12B-AS1Q9P1G2 102 aa7.08□□□□□ -1.28
SEC61B-201ENST00000223641 C4orf26Q17RF5 130 aa7.06□□□□□ -1.28
SEC61B-201ENST00000223641 SNURFQ9Y675 71 aa7.06□□□□□ -1.28
SEC61B-201ENST00000223641 COX6B2Q6YFQ2 88 aa7.05□□□□□ -1.28
SEC61B-201ENST00000223641 KRTAP3-1Q9BYR8 98 aa7.02□□□□□ -1.29
SEC61B-201ENST00000223641 FAT4Q6V0I7 4981 aa7.01□□□□□ -1.29
SEC61B-201ENST00000223641 FAM236DA0A1B0GTK5 79 aa6.99□□□□□ -1.29
SEC61B-201ENST00000223641 FAM236CP0DP71 79 aa6.99□□□□□ -1.29
SEC61B-201ENST00000223641 FLGP20930 4061 aaPredicted RBP6.99□□□□□ -1.29
SEC61B-201ENST00000223641 CCDC179H3BU77 68 aa6.97□□□□□ -1.29
SEC61B-201ENST00000223641 H1FX-AS1Q4G0G2 97 aa6.96□□□□□ -1.3
SEC61B-201ENST00000223641 CYSTM1Q9H1C7 97 aa6.96□□□□□ -1.3
SEC61B-201ENST00000223641 NDUFC1O43677 76 aa6.95□□□□□ -1.3
SEC61B-201ENST00000223641 A8MUN3 132 aa6.93□□□□□ -1.3
SEC61B-201ENST00000223641 H7BZZ5 65 aa6.93□□□□□ -1.3
SEC61B-201ENST00000223641 MT1HP80294 61 aa6.93□□□□□ -1.3
SEC61B-201ENST00000223641 SPANXA2-OT1Q8N9U9 137 aa6.93□□□□□ -1.3
SEC61B-201ENST00000223641 DMAC1Q96GE9 116 aa6.91□□□□□ -1.3
SEC61B-201ENST00000223641 LCE2AQ5TA79 106 aaPredicted RBP6.9□□□□□ -1.3
SEC61B-201ENST00000223641 ACYP2P14621 99 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms