RNA–Protein interactions for RNA: ENST00000221504.12

TRMT1-201, Transcript of tRNA methyltransferase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRMT1, Length 2,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-201ENST00000221504 SPANXA2-OT1Q8N9U9 137 aa8.79□□□□□ -1
TRMT1-201ENST00000221504 RYR3Q15413 4870 aa8.77□□□□□ -1.01
TRMT1-201ENST00000221504 CD164Q04900 197 aa8.76□□□□□ -1.01
TRMT1-201ENST00000221504 Q6ZSA8 131 aa8.76□□□□□ -1.01
TRMT1-201ENST00000221504 SSBP3-AS1Q7Z2R9 100 aa8.76□□□□□ -1.01
TRMT1-201ENST00000221504 MRPL34Q9BQ48 92 aaKnown RBP8.75□□□□□ -1.01
TRMT1-201ENST00000221504 A0A087X002 238 aa8.75□□□□□ -1.01
TRMT1-201ENST00000221504 NOTCH2NLQ7Z3S9 236 aa8.75□□□□□ -1.01
TRMT1-201ENST00000221504 NDUFS5O43920 106 aa8.74□□□□□ -1.01
TRMT1-201ENST00000221504 KRTAP10-1P60331 282 aa8.74□□□□□ -1.01
TRMT1-201ENST00000221504 PKD1P98161 4303 aa8.74□□□□□ -1.01
TRMT1-201ENST00000221504 Q1T7F1 81 aa8.73□□□□□ -1.01
TRMT1-201ENST00000221504 SPINK6Q6UWN8 80 aa8.73□□□□□ -1.01
TRMT1-201ENST00000221504 FAT2Q9NYQ8 4349 aa8.73□□□□□ -1.01
TRMT1-201ENST00000221504 HYDINQ4G0P3 5121 aa8.71□□□□□ -1.02
TRMT1-201ENST00000221504 LRP1BQ9NZR2 4599 aa8.7□□□□□ -1.02
TRMT1-201ENST00000221504 IGLV7-46A0A075B6I9 117 aa8.68□□□□□ -1.02
TRMT1-201ENST00000221504 KRTAP13-2Q52LG2 175 aa8.67□□□□□ -1.02
TRMT1-201ENST00000221504 PCOTHQ58A44 107 aa8.67□□□□□ -1.02
TRMT1-201ENST00000221504 PSPHP1O15172 72 aa8.66□□□□□ -1.02
TRMT1-201ENST00000221504 C8orf87E5RJ46 101 aa8.63□□□□□ -1.03
TRMT1-201ENST00000221504 C1orf195Q5TG92 126 aa8.62□□□□□ -1.03
TRMT1-201ENST00000221504 KRTAP1-4P0C5Y4 121 aa8.61□□□□□ -1.03
TRMT1-201ENST00000221504 VPS13BQ7Z7G8 4022 aa8.59□□□□□ -1.03
TRMT1-201ENST00000221504 KRTAP13-3Q3SY46 172 aa8.59□□□□□ -1.03
TRMT1-201ENST00000221504 Q5W150 140 aa8.59□□□□□ -1.03
TRMT1-201ENST00000221504 COA5Q86WW8 74 aa8.59□□□□□ -1.03
TRMT1-201ENST00000221504 LOC101927531A0A1B0GV80 90 aa8.58□□□□□ -1.04
TRMT1-201ENST00000221504 A8MUN3 132 aa8.58□□□□□ -1.04
TRMT1-201ENST00000221504 V9GYY9 64 aa8.58□□□□□ -1.04
TRMT1-201ENST00000221504 LINC00313P59037 77 aa8.56□□□□□ -1.04
TRMT1-201ENST00000221504 RYR2Q92736 4967 aa8.55□□□□□ -1.04
TRMT1-201ENST00000221504 Q8N9P0 234 aaPredicted RBP8.55□□□□□ -1.04
TRMT1-201ENST00000221504 Q5VV11 94 aa8.54□□□□□ -1.04
TRMT1-201ENST00000221504 LIMD2Q9BT23 127 aa8.54□□□□□ -1.04
TRMT1-201ENST00000221504 PKHD1P08F94 4074 aa8.51□□□□□ -1.05
TRMT1-201ENST00000221504 PLA2G1BP04054 148 aaKnown RBP8.51□□□□□ -1.05
TRMT1-201ENST00000221504 SACSQ9NZJ4 4579 aa8.51□□□□□ -1.05
TRMT1-201ENST00000221504 BIRC6Q9NR09 4857 aa8.5□□□□□ -1.05
TRMT1-201ENST00000221504 A8MU10 97 aa8.48□□□□□ -1.05
TRMT1-201ENST00000221504 FAM229AH3BQW9 127 aa8.48□□□□□ -1.05
TRMT1-201ENST00000221504 TYMSOSQ8TAI1 123 aa8.48□□□□□ -1.05
TRMT1-201ENST00000221504 HRES1P13985 223 aa8.48□□□□□ -1.05
TRMT1-201ENST00000221504 PRR15LQ9BU68 103 aa8.48□□□□□ -1.05
TRMT1-201ENST00000221504 EPPK1P58107 5090 aaKnown RBP8.48□□□□□ -1.05
TRMT1-201ENST00000221504 KRTAP16-1A8MUX0 517 aa8.47□□□□□ -1.05
TRMT1-201ENST00000221504 C4orf48Q5BLP8 95 aa8.47□□□□□ -1.05
TRMT1-201ENST00000221504 SPINK1P00995 79 aa8.45□□□□□ -1.06
TRMT1-201ENST00000221504 CHKB-CPT1BH3BT56 60 aa8.44□□□□□ -1.06
TRMT1-201ENST00000221504 RETNLBQ9BQ08 111 aa8.42□□□□□ -1.06
TRMT1-201ENST00000221504 IGKV2-30P06310 120 aa8.41□□□□□ -1.06
TRMT1-201ENST00000221504 DYNC1H1Q14204 4646 aaKnown RBP8.39□□□□□ -1.07
TRMT1-201ENST00000221504 PMAIP1Q13794 54 aa8.39□□□□□ -1.07
TRMT1-201ENST00000221504 SPAG11AQ6PDA7 123 aa8.39□□□□□ -1.07
TRMT1-201ENST00000221504 Q75L30 129 aa8.39□□□□□ -1.07
TRMT1-201ENST00000221504 PRR26Q8N8Z3 221 aa8.39□□□□□ -1.07
TRMT1-201ENST00000221504 LINC00304Q8N9R0 145 aa8.37□□□□□ -1.07
TRMT1-201ENST00000221504 LINC01558Q9Y6Z2 57 aa8.37□□□□□ -1.07
TRMT1-201ENST00000221504 ACYP2P14621 99 aa8.37□□□□□ -1.07
TRMT1-201ENST00000221504 DMAC1Q96GE9 116 aa8.36□□□□□ -1.07
TRMT1-201ENST00000221504 SMR3BP02814 79 aaPredicted RBP8.35□□□□□ -1.07
TRMT1-201ENST00000221504 RPS29P62273 56 aaKnown RBP8.35□□□□□ -1.07
TRMT1-201ENST00000221504 A0A1B0GVY2 172 aa8.35□□□□□ -1.07
TRMT1-201ENST00000221504 LCA10Q71F78 164 aa8.33□□□□□ -1.08
TRMT1-201ENST00000221504 A6NED7 52 aa8.32□□□□□ -1.08
TRMT1-201ENST00000221504 APOBP04114 4563 aaKnown RBP8.3□□□□□ -1.08
TRMT1-201ENST00000221504 IGKV2D-30A0A075B6S6 120 aa8.29□□□□□ -1.08
TRMT1-201ENST00000221504 SEC61GP60059 68 aa8.29□□□□□ -1.08
TRMT1-201ENST00000221504 FAT1Q14517 4588 aa8.28□□□□□ -1.08
TRMT1-201ENST00000221504 KRTAP10-4P60372 401 aaPredicted RBP8.28□□□□□ -1.08
TRMT1-201ENST00000221504 SPTSSBQ8NFR3 76 aa8.28□□□□□ -1.08
TRMT1-201ENST00000221504 KRTAP17-1Q9BYP8 105 aa8.28□□□□□ -1.08
TRMT1-201ENST00000221504 PKHD1L1Q86WI1 4243 aa8.25□□□□□ -1.09
TRMT1-201ENST00000221504 ATP11AUNQ6ZP68 121 aa8.24□□□□□ -1.09
TRMT1-201ENST00000221504 CDC42SE1Q9NRR8 79 aa8.24□□□□□ -1.09
TRMT1-201ENST00000221504 SPINK7P58062 85 aa8.21□□□□□ -1.1
TRMT1-201ENST00000221504 A6NN06 94 aa8.19□□□□□ -1.1
TRMT1-201ENST00000221504 C7orf65Q6ZTY9 151 aa8.19□□□□□ -1.1
TRMT1-201ENST00000221504 KTN1-AS1Q86SY8 53 aa8.19□□□□□ -1.1
TRMT1-201ENST00000221504 HERC2O95714 4834 aa8.15□□□□□ -1.1
TRMT1-201ENST00000221504 C9orf92A6NGG3 77 aa8.15□□□□□ -1.11
TRMT1-201ENST00000221504 C20orf166-AS1Q96NR2 134 aa8.14□□□□□ -1.11
TRMT1-201ENST00000221504 A8MUU9 505 aa8.13□□□□□ -1.11
TRMT1-201ENST00000221504 A0A1B0GU69 56 aa8.1□□□□□ -1.11
TRMT1-201ENST00000221504 Q8N1X5 172 aa8.08□□□□□ -1.12
TRMT1-201ENST00000221504 FLG2Q5D862 2391 aaPredicted RBP8.06□□□□□ -1.12
TRMT1-201ENST00000221504 RBM12B-AS1Q9P1G2 102 aa8.04□□□□□ -1.12
TRMT1-201ENST00000221504 PCLOQ9Y6V0 5065 aa8□□□□□ -1.13
TRMT1-201ENST00000221504 KIAA1109Q2LD37 5005 aa7.99□□□□□ -1.13
TRMT1-201ENST00000221504 TNXBP22105 4242 aa7.97□□□□□ -1.13
TRMT1-201ENST00000221504 HSPG2P98160 4391 aa7.97□□□□□ -1.13
TRMT1-201ENST00000221504 LRP1Q07954 4544 aaKnown RBP7.96□□□□□ -1.13
TRMT1-201ENST00000221504 KRTAP10-8P60410 259 aa7.96□□□□□ -1.14
TRMT1-201ENST00000221504 Q5VSD8 79 aa7.96□□□□□ -1.14
TRMT1-201ENST00000221504 FAT3Q8TDW7 4589 aa7.95□□□□□ -1.14
TRMT1-201ENST00000221504 UQCR11O14957 56 aa7.94□□□□□ -1.14
TRMT1-201ENST00000221504 KRTAP3-1Q9BYR8 98 aa7.94□□□□□ -1.14
TRMT1-201ENST00000221504 SPATA8Q6RVD6 105 aa7.93□□□□□ -1.14
TRMT1-201ENST00000221504 MIR22HGQ0VDD5 57 aa7.9□□□□□ -1.14
TRMT1-201ENST00000221504 RYR1P21817 5038 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms