RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 NF1P21359 2839 aa2□□□□□ -2.09
NEB-201ENST00000172853 KRTAP1-1Q07627 177 aa2□□□□□ -2.09
NEB-201ENST00000172853 APCP25054 2843 aa2□□□□□ -2.09
NEB-201ENST00000172853 TENM4Q6N022 2769 aa2□□□□□ -2.09
NEB-201ENST00000172853 PP632Q6XCG6 107 aa2□□□□□ -2.09
NEB-201ENST00000172853 LAMA1P25391 3075 aa2□□□□□ -2.09
NEB-201ENST00000172853 SPRR1AP35321 89 aa1.99□□□□□ -2.09
NEB-201ENST00000172853 LINC00472Q9H8W2 130 aa1.99□□□□□ -2.09
NEB-201ENST00000172853 STAB2Q8WWQ8 2551 aa1.99□□□□□ -2.09
NEB-201ENST00000172853 A6NN06 94 aa1.99□□□□□ -2.09
NEB-201ENST00000172853 KRTAP10-10P60014 251 aa1.99□□□□□ -2.09
NEB-201ENST00000172853 KRTAP26-1Q6PEX3 210 aa1.98□□□□□ -2.09
NEB-201ENST00000172853 ZZEF1O43149 2961 aa1.98□□□□□ -2.09
NEB-201ENST00000172853 SPENQ96T58 3664 aaKnown RBP1.97□□□□□ -2.09
NEB-201ENST00000172853 NDUFAF8A1L188 74 aa1.97□□□□□ -2.09
NEB-201ENST00000172853 MYO15AQ9UKN7 3530 aa1.97□□□□□ -2.09
NEB-201ENST00000172853 NBPF19A0A087WUL8 3843 aa1.96□□□□□ -2.1
NEB-201ENST00000172853 DMXL2Q8TDJ6 3036 aa1.96□□□□□ -2.1
NEB-201ENST00000172853 EYSQ5T1H1 3165 aa1.96□□□□□ -2.1
NEB-201ENST00000172853 BOD1L1Q8NFC6 3051 aa1.95□□□□□ -2.1
NEB-201ENST00000172853 A0A087X002 238 aa1.95□□□□□ -2.1
NEB-201ENST00000172853 NOTCH2NLQ7Z3S9 236 aa1.95□□□□□ -2.1
NEB-201ENST00000172853 DNAH14Q0VDD8 3507 aa1.95□□□□□ -2.1
NEB-201ENST00000172853 CELSR3Q9NYQ7 3312 aa1.95□□□□□ -2.1
NEB-201ENST00000172853 TGP01266 2768 aa1.95□□□□□ -2.1
NEB-201ENST00000172853 NBEAL2Q6ZNJ1 2754 aa1.95□□□□□ -2.1
NEB-201ENST00000172853 LAMA5O15230 3695 aa1.95□□□□□ -2.1
NEB-201ENST00000172853 MUC3AQ02505 3323 aa1.94□□□□□ -2.1
NEB-201ENST00000172853 A0A1B0GVY2 172 aa1.94□□□□□ -2.1
NEB-201ENST00000172853 CFAP47Q6ZTR5 3102 aa1.94□□□□□ -2.1
NEB-201ENST00000172853 KRTAP4-16G5E9R7 235 aaPredicted RBP1.94□□□□□ -2.1
NEB-201ENST00000172853 TENM3Q9P273 2699 aa1.93□□□□□ -2.1
NEB-201ENST00000172853 PDZD2O15018 2839 aa1.93□□□□□ -2.1
NEB-201ENST00000172853 KRTAP25-1Q3LHN0 102 aa1.93□□□□□ -2.1
NEB-201ENST00000172853 SMG1Q96Q15 3661 aaKnown RBP1.93□□□□□ -2.1
NEB-201ENST00000172853 TENM1Q9UKZ4 2725 aa1.92□□□□□ -2.1
NEB-201ENST00000172853 ATMQ13315 3056 aa1.92□□□□□ -2.1
NEB-201ENST00000172853 ZFHX4Q86UP3 3567 aa1.92□□□□□ -2.1
NEB-201ENST00000172853 CELSR2Q9HCU4 2923 aa1.91□□□□□ -2.1
NEB-201ENST00000172853 WDFY3Q8IZQ1 3526 aa1.9□□□□□ -2.11
NEB-201ENST00000172853 Q6ZRN7 208 aaPredicted RBP1.9□□□□□ -2.11
NEB-201ENST00000172853 KRTAP1-5Q9BYS1 174 aa1.9□□□□□ -2.11
NEB-201ENST00000172853 DMBT1Q9UGM3 2413 aaPredicted RBP1.89□□□□□ -2.11
NEB-201ENST00000172853 ADGRG4Q8IZF6 3080 aa1.89□□□□□ -2.11
NEB-201ENST00000172853 ZFHX3Q15911 3703 aa1.89□□□□□ -2.11
NEB-201ENST00000172853 DCHS2Q6V1P9 2916 aa1.89□□□□□ -2.11
NEB-201ENST00000172853 DCHS1Q96JQ0 3298 aa1.89□□□□□ -2.11
NEB-201ENST00000172853 FBN1P35555 2871 aaKnown RBP1.89□□□□□ -2.11
NEB-201ENST00000172853 FBN2P35556 2912 aa1.88□□□□□ -2.11
NEB-201ENST00000172853 PKD1L1Q8TDX9 2849 aa1.88□□□□□ -2.11
NEB-201ENST00000172853 COL12A1Q99715 3063 aa1.88□□□□□ -2.11
NEB-201ENST00000172853 TPRXLQ17RH7 258 aa1.88□□□□□ -2.11
NEB-201ENST00000172853 VWFP04275 2813 aa1.87□□□□□ -2.11
NEB-201ENST00000172853 CELSR1Q9NYQ6 3014 aa1.87□□□□□ -2.11
NEB-201ENST00000172853 LOC400499M0QZD8 3231 aa1.85□□□□□ -2.11
NEB-201ENST00000172853 SPEGQ15772 3267 aa1.85□□□□□ -2.11
NEB-201ENST00000172853 KRTAP29-1A8MX34 341 aaPredicted RBP1.85□□□□□ -2.11
NEB-201ENST00000172853 ASPMQ8IZT6 3477 aa1.85□□□□□ -2.11
NEB-201ENST00000172853 XP32Q5T750 250 aa1.85□□□□□ -2.11
NEB-201ENST00000172853 AKAP9Q99996 3911 aa1.84□□□□□ -2.11
NEB-201ENST00000172853 VPS13CQ709C8 3753 aa1.84□□□□□ -2.11
NEB-201ENST00000172853 OTOGQ6ZRI0 2925 aa1.83□□□□□ -2.12
NEB-201ENST00000172853 KRTAP13-2Q52LG2 175 aa1.83□□□□□ -2.12
NEB-201ENST00000172853 KRTAP11-1Q8IUC1 163 aa1.82□□□□□ -2.12
NEB-201ENST00000172853 TENM2Q9NT68 2774 aa1.81□□□□□ -2.12
NEB-201ENST00000172853 FBN3Q75N90 2809 aa1.8□□□□□ -2.12
NEB-201ENST00000172853 ANK2Q01484 3957 aa1.79□□□□□ -2.12
NEB-201ENST00000172853 BSNQ9UPA5 3926 aa1.79□□□□□ -2.12
NEB-201ENST00000172853 KRTAP7-1Q8IUC3 87 aa1.78□□□□□ -2.12
NEB-201ENST00000172853 KRTAP15-1Q3LI76 137 aa1.78□□□□□ -2.13
NEB-201ENST00000172853 COL7A1Q02388 2944 aa1.77□□□□□ -2.13
NEB-201ENST00000172853 KRTAP12-2P59991 146 aa1.77□□□□□ -2.13
NEB-201ENST00000172853 KRTAP13-1Q8IUC0 172 aa1.76□□□□□ -2.13
NEB-201ENST00000172853 CSMD1Q96PZ7 3565 aa1.75□□□□□ -2.13
NEB-201ENST00000172853 RELNP78509 3460 aa1.74□□□□□ -2.13
NEB-201ENST00000172853 KRTAP10-6P60371 365 aaPredicted RBP1.74□□□□□ -2.13
NEB-201ENST00000172853 DNAH3Q8TD57 4116 aa1.74□□□□□ -2.13
NEB-201ENST00000172853 KRTAP13-3Q3SY46 172 aa1.73□□□□□ -2.13
NEB-201ENST00000172853 H0YAA0 97 aa1.73□□□□□ -2.13
NEB-201ENST00000172853 SRRM2Q9UQ35 2752 aaKnown RBP1.73□□□□□ -2.13
NEB-201ENST00000172853 TRRAPQ9Y4A5 3859 aa1.72□□□□□ -2.13
NEB-201ENST00000172853 CRCT1Q9UGL9 99 aa1.71□□□□□ -2.14
NEB-201ENST00000172853 KRTAP13-4Q3LI77 160 aa1.71□□□□□ -2.14
NEB-201ENST00000172853 KRTAP1-4P0C5Y4 121 aa1.69□□□□□ -2.14
NEB-201ENST00000172853 LYSTQ99698 3801 aa1.69□□□□□ -2.14
NEB-201ENST00000172853 ALMS1Q8TCU4 4167 aa1.69□□□□□ -2.14
NEB-201ENST00000172853 CSMD2Q7Z408 3487 aa1.69□□□□□ -2.14
NEB-201ENST00000172853 ZNF469Q96JG9 3925 aaPredicted RBP1.68□□□□□ -2.14
NEB-201ENST00000172853 INE1O15225 51 aa1.66□□□□□ -2.14
NEB-201ENST00000172853 MEGF8Q7Z7M0 2845 aa1.65□□□□□ -2.14
NEB-201ENST00000172853 DNAH7Q8WXX0 4024 aa1.65□□□□□ -2.15
NEB-201ENST00000172853 DNAH10Q8IVF4 4471 aa1.64□□□□□ -2.15
NEB-201ENST00000172853 CUBNO60494 3623 aa1.63□□□□□ -2.15
NEB-201ENST00000172853 DNAH6Q9C0G6 4158 aa1.63□□□□□ -2.15
NEB-201ENST00000172853 KRTAP10-12P60413 245 aa1.63□□□□□ -2.15
NEB-201ENST00000172853 HECTD4Q9Y4D8 3996 aa1.61□□□□□ -2.15
NEB-201ENST00000172853 CMYA5Q8N3K9 4069 aa1.61□□□□□ -2.15
NEB-201ENST00000172853 LORP23490 312 aaPredicted RBP1.6□□□□□ -2.15
NEB-201ENST00000172853 SVEP1Q4LDE5 3571 aa1.6□□□□□ -2.15
NEB-201ENST00000172853 HUWE1Q7Z6Z7 4374 aaKnown RBP1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms