RNA–Protein interactions for RNA: ENST00000055077.7

RFC2-201, Transcript of replication factor C subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC2, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-201ENST00000055077 TNXBP22105 4242 aa13.22□□□□□ -0.29
RFC2-201ENST00000055077 FLG2Q5D862 2391 aaPredicted RBP13.22□□□□□ -0.29
RFC2-201ENST00000055077 MMP24-AS1A0A0U1RRL7 71 aa13.21□□□□□ -0.29
RFC2-201ENST00000055077 WFDC13Q8IUB5 93 aa13.21□□□□□ -0.3
RFC2-201ENST00000055077 KRTAP4-5Q9BYR2 181 aa13.2□□□□□ -0.3
RFC2-201ENST00000055077 C8orf17Q9NRJ1 99 aa13.19□□□□□ -0.3
RFC2-201ENST00000055077 CASC2Q6XLA1 102 aa13.18□□□□□ -0.3
RFC2-201ENST00000055077 KRTAP29-1A8MX34 341 aaPredicted RBP13.18□□□□□ -0.3
RFC2-201ENST00000055077 SMIM20Q8N5G0 67 aa13.15□□□□□ -0.3
RFC2-201ENST00000055077 hDV103S1A0JD37 113 aa13.15□□□□□ -0.31
RFC2-201ENST00000055077 MT1HL1P0DM35 61 aa13.15□□□□□ -0.31
RFC2-201ENST00000055077 OXTP01178 125 aa13.14□□□□□ -0.31
RFC2-201ENST00000055077 C8orf87E5RJ46 101 aa13.13□□□□□ -0.31
RFC2-201ENST00000055077 MYCBP2O75592 4640 aa13.12□□□□□ -0.31
RFC2-201ENST00000055077 SERP2Q8N6R1 65 aa13.12□□□□□ -0.31
RFC2-201ENST00000055077 NOTCH2NLQ7Z3S9 236 aa13.11□□□□□ -0.31
RFC2-201ENST00000055077 TRAV7A0A075B6U4 112 aa13.09□□□□□ -0.31
RFC2-201ENST00000055077 OCR1Q9BZK8 76 aa13.08□□□□□ -0.31
RFC2-201ENST00000055077 COX7CP15954 63 aa13.06□□□□□ -0.32
RFC2-201ENST00000055077 LINC00313P59037 77 aa13.06□□□□□ -0.32
RFC2-201ENST00000055077 TMEM254Q8TBM7 123 aa13.05□□□□□ -0.32
RFC2-201ENST00000055077 HERC2O95714 4834 aa13.05□□□□□ -0.32
RFC2-201ENST00000055077 RETNLBQ9BQ08 111 aa13.05□□□□□ -0.32
RFC2-201ENST00000055077 MRPL34Q9BQ48 92 aaKnown RBP13.04□□□□□ -0.32
RFC2-201ENST00000055077 UQCRQO14949 82 aa13.02□□□□□ -0.33
RFC2-201ENST00000055077 CCDC179H3BU77 68 aa12.97□□□□□ -0.33
RFC2-201ENST00000055077 DMBT1Q9UGM3 2413 aaPredicted RBP12.96□□□□□ -0.33
RFC2-201ENST00000055077 ABCA13Q86UQ4 5058 aa12.94□□□□□ -0.34
RFC2-201ENST00000055077 KRTAP16-1A8MUX0 517 aa12.93□□□□□ -0.34
RFC2-201ENST00000055077 NDUFS5O43920 106 aa12.93□□□□□ -0.34
RFC2-201ENST00000055077 FP248Q71RG6 208 aaPredicted RBP12.93□□□□□ -0.34
RFC2-201ENST00000055077 TP53AIP1Q9HCN2 124 aa12.93□□□□□ -0.34
RFC2-201ENST00000055077 Q8N9P0 234 aaPredicted RBP12.88□□□□□ -0.35
RFC2-201ENST00000055077 C20orf197Q8N268 126 aa12.87□□□□□ -0.35
RFC2-201ENST00000055077 C5orf47Q569G3 176 aa12.86□□□□□ -0.35
RFC2-201ENST00000055077 C9orf92A6NGG3 77 aa12.84□□□□□ -0.35
RFC2-201ENST00000055077 TRAV22A0A0B4J277 110 aa12.81□□□□□ -0.36
RFC2-201ENST00000055077 J3QL48 77 aa12.81□□□□□ -0.36
RFC2-201ENST00000055077 IGLV7-46A0A075B6I9 117 aa12.8□□□□□ -0.36
RFC2-201ENST00000055077 MP68P56378 58 aa12.8□□□□□ -0.36
RFC2-201ENST00000055077 H0Y9P7 68 aa12.79□□□□□ -0.36
RFC2-201ENST00000055077 KLKP1Q107X0 134 aa12.79□□□□□ -0.36
RFC2-201ENST00000055077 A0A0U1RQV1 116 aa12.77□□□□□ -0.36
RFC2-201ENST00000055077 SNURFQ9Y675 71 aa12.77□□□□□ -0.37
RFC2-201ENST00000055077 H3BPC8 53 aa12.73□□□□□ -0.37
RFC2-201ENST00000055077 PRR4Q16378 134 aa12.73□□□□□ -0.37
RFC2-201ENST00000055077 CYSTM1Q9H1C7 97 aa12.73□□□□□ -0.37
RFC2-201ENST00000055077 C20orf166-AS1Q96NR2 134 aa12.72□□□□□ -0.37
RFC2-201ENST00000055077 Q5W150 140 aa12.7□□□□□ -0.38
RFC2-201ENST00000055077 LINC00208Q96KT6 92 aa12.7□□□□□ -0.38
RFC2-201ENST00000055077 A8MUU9 505 aa12.69□□□□□ -0.38
RFC2-201ENST00000055077 KRTAP13-3Q3SY46 172 aa12.69□□□□□ -0.38
RFC2-201ENST00000055077 ZCCHC13Q8WW36 166 aaKnown RBP12.69□□□□□ -0.38
RFC2-201ENST00000055077 C1orf64Q8NEQ6 169 aa12.66□□□□□ -0.38
RFC2-201ENST00000055077 NDUFC1O43677 76 aa12.64□□□□□ -0.39
RFC2-201ENST00000055077 Q75L30 129 aa12.62□□□□□ -0.39
RFC2-201ENST00000055077 H7BZZ5 65 aa12.6□□□□□ -0.39
RFC2-201ENST00000055077 TPRXLQ17RH7 258 aa12.59□□□□□ -0.39
RFC2-201ENST00000055077 LOC101927531A0A1B0GV80 90 aa12.57□□□□□ -0.4
RFC2-201ENST00000055077 XP32Q5T750 250 aa12.57□□□□□ -0.4
RFC2-201ENST00000055077 TMEM258P61165 79 aa12.52□□□□□ -0.4
RFC2-201ENST00000055077 RPL37P61927 97 aaKnown RBP12.51□□□□□ -0.41
RFC2-201ENST00000055077 PCLOQ9Y6V0 5065 aa12.5□□□□□ -0.41
RFC2-201ENST00000055077 IGKV2-30P06310 120 aa12.49□□□□□ -0.41
RFC2-201ENST00000055077 CYP4F30PQ9H0H9 118 aa12.47□□□□□ -0.41
RFC2-201ENST00000055077 ATP11AUNQ6ZP68 121 aa12.44□□□□□ -0.42
RFC2-201ENST00000055077 IGKV2D-30A0A075B6S6 120 aa12.43□□□□□ -0.42
RFC2-201ENST00000055077 PCOTHQ58A44 107 aa12.43□□□□□ -0.42
RFC2-201ENST00000055077 FAM236DA0A1B0GTK5 79 aa12.4□□□□□ -0.42
RFC2-201ENST00000055077 FAM236CP0DP71 79 aa12.4□□□□□ -0.42
RFC2-201ENST00000055077 C7orf65Q6ZTY9 151 aa12.39□□□□□ -0.43
RFC2-201ENST00000055077 ATP5EP56381 51 aaPredicted RBP12.36□□□□□ -0.43
RFC2-201ENST00000055077 SPANXA2-OT1Q8N9U9 137 aa12.35□□□□□ -0.43
RFC2-201ENST00000055077 LPAP08519 4548 aa12.33□□□□□ -0.44
RFC2-201ENST00000055077 SPINK7P58062 85 aa12.28□□□□□ -0.44
RFC2-201ENST00000055077 HRES1P13985 223 aa12.27□□□□□ -0.45
RFC2-201ENST00000055077 LRP2P98164 4655 aa12.24□□□□□ -0.45
RFC2-201ENST00000055077 HERC1Q15751 4861 aa12.19□□□□□ -0.46
RFC2-201ENST00000055077 SEC61BP60468 96 aaKnown RBP12.15□□□□□ -0.46
RFC2-201ENST00000055077 SERP1Q9Y6X1 66 aa12.12□□□□□ -0.47
RFC2-201ENST00000055077 DMAC1Q96GE9 116 aa12.1□□□□□ -0.47
RFC2-201ENST00000055077 C4orf26Q17RF5 130 aa12.1□□□□□ -0.47
RFC2-201ENST00000055077 HMCN2Q8NDA2 5059 aa12.08□□□□□ -0.48
RFC2-201ENST00000055077 RPS28P62857 69 aaKnown RBP12.06□□□□□ -0.48
RFC2-201ENST00000055077 ACYP2P14621 99 aa12.01□□□□□ -0.49
RFC2-201ENST00000055077 A8MUN3 132 aa12□□□□□ -0.49
RFC2-201ENST00000055077 COA5Q86WW8 74 aa11.97□□□□□ -0.49
RFC2-201ENST00000055077 COX6B2Q6YFQ2 88 aa11.97□□□□□ -0.49
RFC2-201ENST00000055077 MUC17Q685J3 4493 aa11.95□□□□□ -0.5
RFC2-201ENST00000055077 KRTAP3-1Q9BYR8 98 aa11.91□□□□□ -0.5
RFC2-201ENST00000055077 MPLKIPQ8TAP9 179 aa11.87□□□□□ -0.51
RFC2-201ENST00000055077 KRTAP4-1Q9BYQ7 146 aa11.85□□□□□ -0.51
RFC2-201ENST00000055077 CHKB-CPT1BH3BT56 60 aa11.83□□□□□ -0.52
RFC2-201ENST00000055077 RBM12B-AS1Q9P1G2 102 aa11.83□□□□□ -0.52
RFC2-201ENST00000055077 SMIM26A0A096LP01 95 aa11.78□□□□□ -0.52
RFC2-201ENST00000055077 H1FX-AS1Q4G0G2 97 aa11.68□□□□□ -0.54
RFC2-201ENST00000055077 SPTSSBQ8NFR3 76 aa11.61□□□□□ -0.55
RFC2-201ENST00000055077 S4R3F8 94 aa11.6□□□□□ -0.55
RFC2-201ENST00000055077 Q1T7F1 81 aa11.57□□□□□ -0.56
RFC2-201ENST00000055077 LCA10Q71F78 164 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms