RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 TgfaP48030 159 aa7.64□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Map6d1Q14BB9 191 aa7.64□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Olfr553Q7TRS6 326 aa7.64□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Gpr82Q8BZR0 328 aa7.64□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 D630044L22RikQ8C701 164 aa7.64□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Mrps36Q9CQX8 102 aa7.64□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 SNORCQ9CXL7 121 aa7.64□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Cacna1eQ61290 2272 aa7.63□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Gm5157A0A087WRH8 301 aa7.63□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Igkv13-84A0A140T8N3 115 aa7.63□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 9430015G10RikA2ASP7 199 aa7.63□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Q9CQM1 111 aa7.63□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Gtsf1lQ9CWD0 151 aa7.63□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Igkv1-133A0A0B4J1H8 120 aa7.63□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 NpwA0A1L1STR8 176 aa7.63□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Fxyd7P59648 80 aa7.63□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Pglyrp4Q0VB07 374 aa7.63□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 CnfnQ6PCW6 111 aa7.63□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Ube2wQ8VDW4 151 aa7.63□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Mustn1Q99JI1 82 aa7.63□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Fmc1Q9CR13 113 aa7.63□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Plac1Q9JI83 173 aa7.63□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 HilpdaQ9JLS0 64 aa7.63□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Phlda3Q9WV95 125 aa7.63□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Trav4d-3A0A075B625 110 aa7.62□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Defa1P11477 93 aa7.62□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Atp5g3P56384 141 aa7.62□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Znf691Q3TDE8 283 aa7.62□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Parm1Q923D3 296 aa7.62□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Atp5g1Q9CR84 136 aa7.62□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Mrpl14Q9D1I6 145 aa7.62□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Zfp119aQ9JIC0 545 aa7.62□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Arid1bE9Q4N7 2244 aa7.62□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Ighv7-1A0A075B5S2 121 aa7.62□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 P01795 144 aa7.62□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Ccl7Q03366 97 aa7.62□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Lrcol1Q3URS3 161 aa7.62□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Gm1553Q66VB7 94 aa7.62□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Vmn1r62Q8R2C0 300 aa7.62□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 DscamQ9ERC8 2013 aa7.62□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Ighv1-37A0A0A6YW32 117 aa7.61□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Nxph4G3X9N5 304 aa7.61□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Defa16P50714 93 aa7.61□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Rbmy1bQ60990 380 aa7.61□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Gm4763Q8CFJ5 196 aa7.61□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Ovol2Q8CIV7 274 aa7.61□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Rnf185Q91YT2 192 aa7.61□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Q9D131 166 aa7.61□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Timm23Q9WTQ8 209 aa7.61□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Igkv14-111A0A140T8P9 117 aa7.61□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 A0A1L1SR50 188 aa7.61□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 NdpP48744 131 aa7.61□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Defa26Q3L180 93 aa7.61□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Defa-rs10Q64263 91 aa7.61□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Rasl11bQ922H7 247 aa7.61□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Ndufa3Q9CQ91 84 aa7.61□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Arpc1aQ9R0Q6 370 aa7.61□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Lama2Q60675 3118 aaKnown RBP7.61□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Trav4n-4A0A075B615 110 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Smim10l1A0A087WNQ7 89 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Dkk1O54908 272 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 P01756 117 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 P01757 117 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Tmem170bP86050 132 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Gm12689Q8BQU9 117 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Il17bQ9QXT6 180 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 DysfQ9ESD7 2090 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Trbv19A0A0B4J1H4 117 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Brd3osA0A1B0GRB6 84 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Gm10135F6TEE5 83 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 P06330 118 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Gata4Q08369 441 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Atp5lQ9CPQ8 103 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Fxyd4Q9D2W0 88 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Dctn5Q9QZB9 182 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Cxcl14Q9WUQ5 99 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 BptfA2A654 3036 aaKnown RBP7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Gm3618D3Z4P5 127 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Defa4P28311 92 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 ErhP84089 104 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 CrygeQ03740 174 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Pate4Q09098 99 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 A830031A19RikQ8BNT5 113 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Ubald2Q8BQH4 164 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Q9D8Q6 235 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Gm2916Q9D9B9 127 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Trappc2lQ9JME7 139 aa7.6□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Gm6525A0A0A6YW33 106 aa7.59□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Gm12830F6XVH0 157 aa7.59□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Defa25Q5G864 92 aa7.59□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Olfr312Q7TRZ9 308 aa7.59□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Fhl4Q8CDC8 279 aa7.59□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 4930544G11RikQ9CR99 193 aa7.59□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Iglv3A0A0B4J1K5 122 aa7.59□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Igkv6-14A0A140T8P1 115 aa7.59□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Gm2174F6ZVF2 133 aa7.59□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Gm9945Q8BNZ3 91 aa7.59□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Cyyr1Q8VIH7 165 aa7.59□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Tmem167aQ9CR64 72 aa7.59□□□□□ -1.19
Hmgb1-201ENSMUST00000085546 Igkv4-80A0A075B5L7 116 aa7.58□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms