RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 SpenQ62504 3644 aaKnown RBP6.77□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Jmjd1cQ69ZK6 2350 aa6.77□□□□□ -1.33
Upf3b-201ENSMUST00000076265 D730001G18RikA0A087WQU7 115 aa6.77□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Trav7-1A0A0G2JEV5 112 aa6.77□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Gm12887B1AVM1 119 aa6.77□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Socs2O35717 198 aa6.77□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Klk1b22P15948 259 aa6.77□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Tac3P55099 116 aa6.77□□□□□ -1.33
Upf3b-201ENSMUST00000076265 AY761185Q5ERI8 94 aa6.77□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Defa25Q5G864 92 aa6.77□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Trpt1Q8K3A2 249 aa6.77□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Nat8Q9JIY7 227 aa6.77□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Rab37Q9JKM7 223 aa6.77□□□□□ -1.33
Upf3b-201ENSMUST00000076265 1810011H11RikE9PVZ2 95 aa6.76□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Reg3gO09049 174 aa6.76□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Sh2d1bO35324 132 aa6.76□□□□□ -1.33
Upf3b-201ENSMUST00000076265 P01634 136 aa6.76□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Atp5j2P56135 88 aaKnown RBP6.76□□□□□ -1.33
Upf3b-201ENSMUST00000076265 RflnbQ5SVD0 216 aa6.76□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Chchd1Q9CQA6 118 aa6.76□□□□□ -1.33
Upf3b-201ENSMUST00000076265 SvilQ8K4L3 2170 aa6.76□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Ep300B2RWS6 2412 aa6.76□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Tns1E9Q0S6 1888 aaKnown RBP6.76□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Celsr1O35161 3034 aa6.76□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Gm16494E9Q2Z4 87 aa6.76□□□□□ -1.33
Upf3b-201ENSMUST00000076265 4930522L14RikE9QAG4 666 aa6.76□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Reg3aO09037 175 aa6.76□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Klf9O35739 244 aa6.76□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Zfp119bQ8K0G9 543 aa6.76□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Ifi27l2aQ8R412 90 aa6.76□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Cml5Q9QXS8 227 aa6.76□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Eml6Q5SQM0 1958 aa6.75□□□□□ -1.33
Upf3b-201ENSMUST00000076265 KantrA0A1W2P7I0 76 aa6.75□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Esp38A8R0X1 80 aa6.75□□□□□ -1.33
Upf3b-201ENSMUST00000076265 H2al2bA9Z055 111 aa6.75□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Zfp964B2RR88 472 aa6.75□□□□□ -1.33
Upf3b-201ENSMUST00000076265 BC035044E0CXF8 138 aa6.75□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Gnb4P29387 340 aa6.75□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Slc39a9Q8BFU1 308 aa6.75□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Zzef1Q5SSH7 2924 aa6.75□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Olfr779E9PUS9 130 aa6.75□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Cldn34c3J3QJW5 233 aa6.75□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Cldn34c2J3QNM1 233 aa6.75□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Serf1O88892 62 aa6.75□□□□□ -1.33
Upf3b-201ENSMUST00000076265 MlanaQ2TA50 113 aa6.75□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Ndufb6Q3UIU2 128 aa6.75□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Tmem256Q5F285 113 aa6.75□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Olfr142Q60881 305 aa6.75□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Fam19a4Q7TPG5 135 aa6.75□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Iba57Q8CAK1 358 aaKnown RBP6.75□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Ammecr1Q9JHT5 344 aaKnown RBP6.75□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Zfp951A0A087WRH0 451 aa6.74□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Sertad4A7DTG3 377 aa6.74□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Zfp456B2RUK9 458 aa6.74□□□□□ -1.33
Upf3b-201ENSMUST00000076265 3110021N24RikJ3QMN2 152 aa6.74□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Socs3O35718 225 aa6.74□□□□□ -1.33
Upf3b-201ENSMUST00000076265 CfpP11680 464 aa6.74□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Mst1P26928 716 aa6.74□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Rpl23P62830 140 aaKnown RBP6.74□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Q08AU9 97 aa6.74□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Foxi2Q3I5G5 311 aa6.74□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Ntn3Q9R1A3 580 aa6.74□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Urb1Q571H0 2274 aaKnown RBP6.74□□□□□ -1.33
Upf3b-201ENSMUST00000076265 A0A1L1SR50 188 aa6.73□□□□□ -1.33
Upf3b-201ENSMUST00000076265 P01735 133 aa6.73□□□□□ -1.33
Upf3b-201ENSMUST00000076265 P04943 107 aa6.73□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Mp68P56379 58 aa6.73□□□□□ -1.33
Upf3b-201ENSMUST00000076265 SbsponQ3UPR9 264 aa6.73□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Fam57bQ7TNV1 275 aa6.73□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Mptx2D3YYJ7 219 aa6.73□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Gm5294J3QP53 216 aa6.73□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Zfp934K7N6H3 473 aa6.73□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Hint1P70349 126 aaKnown RBP6.73□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Dock7Q8R1A4 2130 aaKnown RBP6.73□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Spta1P08032 2415 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Vps13cQ8BX70 3748 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Olfr895L7N210 316 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 P01789 122 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Defa1P11477 93 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Cops9Q3U898 57 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 1810049J17RikQ3V2G9 153 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 GaptQ8CB93 157 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Olfr60Q8VGL4 311 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Gm9817Q9D2M0 144 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Espl1P60330 2118 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Arid1aA2BH40 2283 aaKnown RBP6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Ighv2-6-8A0A0A6YWY9 116 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Olfr896-ps1A0A1L1SRZ8 308 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 A030003K21RikA0A1Y7VIM3 128 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 BC107364E9Q5A2 140 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Tcl1b5P56845 121 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Gphb5Q812B2 130 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 SprnQ8BWU1 147 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Olfr223Q8VF69 319 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Glrx2Q923X4 156 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 4930564D02RikQ9D4S4 103 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Tmem269Q9D4Y8 254 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Q9D7E4 109 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Plp2Q9R1Q7 152 aa6.72□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Gm35315A0A1B0GRI2 571 aa6.71□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 45.8 ms