RNA–Protein interactions for RNA: ENSMUST00000029549.15

Tpm3-201, Transcript of Tropomyosin alpha-3 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm3, Length 2,230 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3-201ENSMUST00000029549 Znf664Q4VA44 261 aa11.2□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Onecut2Q6XBJ3 505 aa11.2□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Tmem140Q8BGY5 185 aa11.2□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Olfr1339Q8VGB1 315 aa11.2□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Obox8V9GWY9 217 aa11.2□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Med13lQ6JPI3 2207 aa11.19□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Abca1P41233 2261 aa11.19□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Rtl10D3YWW5 146 aa11.19□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Gm10036E9PYL9 178 aaKnown RBP11.19□□□□□ -0.62
Tpm3-201ENSMUST00000029549 P04219 140 aa11.19□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Samd5Q3V1H9 173 aa11.19□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Fbln7Q501P1 440 aa11.19□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Ang2Q64438 145 aa11.19□□□□□ -0.62
Tpm3-201ENSMUST00000029549 IqcjQ8BPW0 110 aa11.19□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Znf641Q8BZ34 422 aa11.19□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Tomm40Q9QYA2 361 aa11.19□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Plekhb2Q9QZC7 221 aa11.19□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Ighv1-58A0A075B5W9 117 aa11.19□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Mmp23O88676 391 aa11.19□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Znf239P24399 201 aa11.19□□□□□ -0.62
Tpm3-201ENSMUST00000029549 SeboxP70368 190 aa11.19□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Samd10Q7TST3 202 aa11.19□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Klhdc1Q80YG3 406 aa11.19□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Rnf24Q8BGI1 148 aa11.19□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Gm33815A0A087WNV3 176 aa11.18□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Gm29644A0A087WPG2 191 aa11.18□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Igkv4-59A0A0B4J1I8 117 aa11.18□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Tmem141A2AJB2 108 aa11.18□□□□□ -0.62
Tpm3-201ENSMUST00000029549 AW146154Q3TPQ7 468 aa11.18□□□□□ -0.62
Tpm3-201ENSMUST00000029549 A130051J06RikQ8CAU1 227 aa11.18□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Tmem129Q8K304 362 aa11.18□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Q9CX63 252 aa11.18□□□□□ -0.62
Tpm3-201ENSMUST00000029549 AhspQ9CY02 102 aa11.18□□□□□ -0.62
Tpm3-201ENSMUST00000029549 IcosQ9WVS0 200 aa11.18□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Gp9O88186 177 aa11.17□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Ins2P01326 110 aa11.17□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Gm9913Q8BQQ2 135 aa11.17□□□□□ -0.62
Tpm3-201ENSMUST00000029549 GlmpQ9JHJ3 404 aa11.17□□□□□ -0.62
Tpm3-201ENSMUST00000029549 9530053A07RikE9PVG8 2581 aa11.17□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Tcrg-V6A0A075B5Y8 134 aa11.17□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Gm5878E9PUB3 99 aa11.17□□□□□ -0.62
Tpm3-201ENSMUST00000029549 PlaurP35456 327 aa11.17□□□□□ -0.62
Tpm3-201ENSMUST00000029549 BlcapP62951 87 aa11.17□□□□□ -0.62
Tpm3-201ENSMUST00000029549 EpcamQ99JW5 315 aa11.17□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Ramp1Q9WTJ5 148 aa11.17□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Trav14d-1A0A075B6B1 121 aa11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Sprr3O09116 238 aa11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Itgb1bp1O35671 200 aa11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Sub1P11031 127 aaKnown RBP11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Olfr1209Q3SXJ3 310 aa11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Gm10775Q3V290 127 aa11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Gm5941Q497P9 117 aa11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Muc15Q8C6Z1 331 aa11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Wfdc15bQ9JHY4 80 aa11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Nat6Q9R123 314 aa11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Ighv1-53A0A075B5W3 117 aa11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Rhox7bA6PW38 321 aa11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Vmn1r119E9Q4H3 307 aa11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Acrv1P50289 261 aa11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Shisal1Q0VBP7 198 aa11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 D630044L22RikQ8C701 164 aa11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Gm10118Q8C8J5 116 aa11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Nrn1Q8CFV4 142 aa11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Trpt1Q8K3A2 249 aa11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Olfr477Q8VGI6 310 aa11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Tmem52Q9D702 196 aa11.16□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Trav21-dv12A0A075B6C4 109 aa11.15□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Tcte2E9PY37 120 aa11.15□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Smad7O35253 426 aa11.15□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Rab4aP56371 218 aa11.15□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Fam19a2Q7TPG7 131 aa11.15□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Prelid1Q8R107 217 aa11.15□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Znhit3Q9CQK1 151 aa11.15□□□□□ -0.62
Tpm3-201ENSMUST00000029549 SNORCQ9CXL7 121 aa11.15□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Arl3Q9WUL7 182 aa11.15□□□□□ -0.62
Tpm3-201ENSMUST00000029549 Nf1Q04690 2841 aa11.15□□□□□ -0.63
Tpm3-201ENSMUST00000029549 Trav14-3A0A075B607 120 aa11.15□□□□□ -0.63
Tpm3-201ENSMUST00000029549 Znf48Q3US17 591 aa11.15□□□□□ -0.63
Tpm3-201ENSMUST00000029549 Fbxl7Q5BJ29 491 aa11.15□□□□□ -0.63
Tpm3-201ENSMUST00000029549 Rasl10aQ8K5A4 203 aa11.15□□□□□ -0.63
Tpm3-201ENSMUST00000029549 CubnQ9JLB4 3623 aa11.14□□□□□ -0.63
Tpm3-201ENSMUST00000029549 Tcf21O35437 179 aa11.14□□□□□ -0.63
Tpm3-201ENSMUST00000029549 Gosr1O88630 250 aa11.14□□□□□ -0.63
Tpm3-201ENSMUST00000029549 Tstd1E9PY03 133 aa11.13□□□□□ -0.63
Tpm3-201ENSMUST00000029549 Usmg5Q78IK2 58 aa11.13□□□□□ -0.63
Tpm3-201ENSMUST00000029549 Odf3l1Q810P2 275 aa11.13□□□□□ -0.63
Tpm3-201ENSMUST00000029549 QrfpQ8CE23 124 aa11.13□□□□□ -0.63
Tpm3-201ENSMUST00000029549 Trav16nA0A075B634 117 aa11.13□□□□□ -0.63
Tpm3-201ENSMUST00000029549 Atp5iQ06185 71 aaKnown RBP11.13□□□□□ -0.63
Tpm3-201ENSMUST00000029549 Trav2Q5R1I9 109 aa11.13□□□□□ -0.63
Tpm3-201ENSMUST00000029549 Muc4Q8JZM8 3443 aa11.13□□□□□ -0.63
Tpm3-201ENSMUST00000029549 Trdv2-2Q5R1A4 116 aa11.12□□□□□ -0.63
Tpm3-201ENSMUST00000029549 Plcxd2B2RXA1 340 aa11.12□□□□□ -0.63
Tpm3-201ENSMUST00000029549 Gm10226O88253 85 aa11.12□□□□□ -0.63
Tpm3-201ENSMUST00000029549 Olfr1402Q8VET1 320 aa11.12□□□□□ -0.63
Tpm3-201ENSMUST00000029549 Hcfc2Q9D968 241 aa11.12□□□□□ -0.63
Tpm3-201ENSMUST00000029549 Znf580Q9DB38 172 aa11.12□□□□□ -0.63
Tpm3-201ENSMUST00000029549 1500009C09RikD3YYW9 81 aa11.11□□□□□ -0.63
Tpm3-201ENSMUST00000029549 Gm9376G3UW68 176 aa11.11□□□□□ -0.63
Tpm3-201ENSMUST00000029549 RnasekQ8K3C0 98 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 71.9 ms