RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 eef1akmt3D3YWP0 232 aa8.18□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Ca1P13634 261 aa8.18□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Wfdc2Q9DAU7 174 aa8.18□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Trbv31A0A075B5J5 111 aa8.17□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Col11a1Q61245 1804 aa8.17□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Gm26727M0QWT1 121 aa8.17□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Wt1P22561 449 aa8.17□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Hist1h4aP62806 103 aaKnown RBP8.17□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Ang6Q5GAN0 147 aa8.17□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Pradc1Q9D9N8 188 aa8.17□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Med12lQ8BQM9 2157 aa8.17□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Brd3osA0A1B0GRB6 84 aa8.17□□□□□ -1.1
Ubr1-201ENSMUST00000028728 P01723 117 aa8.17□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Msrb3Q8BU85 253 aa8.17□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Tnfrsf13bQ9ET35 249 aa8.17□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Trav14d-1A0A075B6B1 121 aa8.17□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Ighv1-20A0A0A6YX66 117 aa8.17□□□□□ -1.1
Ubr1-201ENSMUST00000028728 P01789 122 aa8.17□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Spata46Q4FZF2 204 aa8.17□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Q9CQM1 111 aa8.17□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Igkv4-80A0A075B5L7 116 aa8.17□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Tax1bp3Q9DBG9 124 aa8.17□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Gm11733Q8BQP1 125 aa8.16□□□□□ -1.1
Ubr1-201ENSMUST00000028728 P01896 185 aa8.16□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Il1f10Q8R459 152 aa8.16□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Foxi1Q922I5 372 aa8.16□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Nlrc5C3VPR6 1915 aa8.16□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Klk1b4P00757 256 aa8.16□□□□□ -1.1
Ubr1-201ENSMUST00000028728 StrcQ8VIM6 1809 aa8.16□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Gm28038F7BCN9 126 aa8.16□□□□□ -1.1
Ubr1-201ENSMUST00000028728 CtsgP28293 261 aa8.16□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Pglyrp4Q0VB07 374 aa8.16□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Prss41Q920S2 322 aa8.16□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Parm1Q923D3 296 aa8.16□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Cdk2ap2Q9CPY4 127 aa8.16□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Ighv1-23A0A0A6YVW3 117 aa8.16□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Foxf1Q61080 378 aa8.16□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Ank3G5E8K5 1961 aa8.15□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Igkv6-23A0A140T8N5 115 aa8.15□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Ndufa3Q9CQ91 84 aa8.15□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Ramp1Q9WTJ5 148 aa8.15□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Gtf3c1Q8K284 2101 aa8.15□□□□□ -1.1
Ubr1-201ENSMUST00000028728 P01649 108 aa8.15□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Bex1Q9R224 128 aa8.15□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Olfr317Q5NCD6 327 aa8.15□□□□□ -1.1
Ubr1-201ENSMUST00000028728 SpinklQ8CEK3 90 aa8.15□□□□□ -1.1
Ubr1-201ENSMUST00000028728 IappP12968 93 aa8.15□□□□□ -1.1
Ubr1-201ENSMUST00000028728 Fam110aQ8R184 296 aa8.15□□□□□ -1.11
Ubr1-201ENSMUST00000028728 H1fxQ80ZM5 188 aa8.15□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Trav9-1A0A075B601 112 aa8.14□□□□□ -1.11
Ubr1-201ENSMUST00000028728 NpsP0C0P8 89 aa8.14□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Zfp36l1P23950 338 aa8.14□□□□□ -1.11
Ubr1-201ENSMUST00000028728 BB014433Q8C5R5 389 aa8.14□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Atg2aQ6P4T0 1914 aa8.14□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Sap30O88574 220 aa8.14□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Gm7489Q3UT34 171 aa8.14□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Gm10604Q3V0X7 143 aa8.14□□□□□ -1.11
Ubr1-201ENSMUST00000028728 RlfA2A7F4 1918 aa8.14□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Myod1P10085 318 aa8.14□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Usmg5Q78IK2 58 aa8.14□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Cxcl13O55038 109 aa8.14□□□□□ -1.11
Ubr1-201ENSMUST00000028728 P01792 123 aa8.14□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Mrps21P58059 87 aa8.14□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Plxna2P70207 1894 aa8.14□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Igkv4-71A0A0G2JEH0 117 aa8.14□□□□□ -1.11
Ubr1-201ENSMUST00000028728 1700067P10RikG3X8U2 183 aa8.14□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Socs3O35718 225 aa8.14□□□□□ -1.11
Ubr1-201ENSMUST00000028728 CrygbP04344 175 aa8.14□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Ccl3P10855 92 aa8.14□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Trdv5A0A075B661 115 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Gm11020F6ZGD5 61 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Cox6a1P43024 111 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 NdpP48744 131 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Rasl10aQ8K5A4 203 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Abca1P41233 2261 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Zfp648D3Z0W3 525 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Rpl36aP83882 106 aaKnown RBP8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Srsf2Q62093 221 aaKnown RBP8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Ighv14-1A0A075B5R4 117 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Sfta2E9PXB6 77 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 March3Q8BRX9 218 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Defb3Q9WTL0 63 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Ighv6-7A0A0A6YWU3 119 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Cdkn1aP39689 159 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Mustn1Q99JI1 82 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Fam241bQ9D882 120 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 P18532 116 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Olfr312Q7TRZ9 308 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Olfr1199Q8VF94 310 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Fam168aQ8BGZ2 244 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Ifi27l2aQ8R412 90 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Atp6v0e2Q91XE7 81 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Ankrd39Q9D2X0 183 aa8.13□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Cacna1eQ61290 2272 aa8.12□□□□□ -1.11
Ubr1-201ENSMUST00000028728 GlrxQ9QUH0 107 aa8.12□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Gm12830F6XVH0 157 aa8.12□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Tmem14cQ9CQN6 114 aa8.12□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Trav6-4A0A075B6B4 115 aa8.12□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Gm6871L7N248 545 aa8.12□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Greb1Q3UHK3 1954 aa8.12□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms