RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Rpl24Q8BP67 157 aaKnown RBP9.47□□□□□ -0.89
Rfx1-201ENSMUST00000005600 QrfpQ8CE23 124 aa9.47□□□□□ -0.89
Rfx1-201ENSMUST00000005600 Tmem97Q8VD00 176 aa9.47□□□□□ -0.89
Rfx1-201ENSMUST00000005600 PpdpfQ9CR37 115 aa9.47□□□□□ -0.89
Rfx1-201ENSMUST00000005600 Tmem89Q9DA04 169 aa9.47□□□□□ -0.89
Rfx1-201ENSMUST00000005600 Ighv2-6A0A075B6A7 116 aa9.46□□□□□ -0.89
Rfx1-201ENSMUST00000005600 Pde6hP61249 83 aa9.46□□□□□ -0.89
Rfx1-201ENSMUST00000005600 Bsph2Q0Q236 131 aa9.46□□□□□ -0.89
Rfx1-201ENSMUST00000005600 Dtx1Q61010 627 aa9.46□□□□□ -0.89
Rfx1-201ENSMUST00000005600 Cd52Q64389 74 aa9.46□□□□□ -0.89
Rfx1-201ENSMUST00000005600 RpeQ8VEE0 228 aa9.46□□□□□ -0.89
Rfx1-201ENSMUST00000005600 Rbms1Q91W59 403 aaKnown RBP9.46□□□□□ -0.89
Rfx1-201ENSMUST00000005600 Tnfrsf23Q9ER63 176 aa9.46□□□□□ -0.89
Rfx1-201ENSMUST00000005600 CenpeQ6RT24 2474 aaKnown RBP9.46□□□□□ -0.89
Rfx1-201ENSMUST00000005600 BokO35425 213 aa9.46□□□□□ -0.89
Rfx1-201ENSMUST00000005600 Spink2Q8BMY7 86 aa9.46□□□□□ -0.89
Rfx1-201ENSMUST00000005600 Spcs1Q9D958 161 aa9.46□□□□□ -0.89
Rfx1-201ENSMUST00000005600 Gm884A2A9H6 3643 aa9.46□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Tmem141A2AJB2 108 aa9.46□□□□□ -0.9
Rfx1-201ENSMUST00000005600 BC107364E9Q5A2 140 aa9.46□□□□□ -0.9
Rfx1-201ENSMUST00000005600 E030018B13RikJ3QMS9 113 aa9.46□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Tmem88bQ3TYP4 173 aa9.45□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Ccsmst1Q6RUT7 136 aa9.45□□□□□ -0.9
Rfx1-201ENSMUST00000005600 9230109A22RikQ8BHE6 111 aa9.45□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Fmc1Q9CR13 113 aa9.45□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Rchy1Q9CR50 261 aa9.45□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Nav2E9Q842 2432 aa9.45□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Ighv5-6A0A075B5Q0 117 aa9.45□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Obp2bA2BHR0 176 aa9.45□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Defa34D3Z0J0 93 aa9.45□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Ndufc2Q9CQ54 120 aa9.45□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Bak1O08734 209 aa9.45□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Mtatp8P03930 67 aa9.45□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Gm10192Q3V0S1 108 aa9.45□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Hoxc12Q8K5B8 280 aa9.45□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Gm20517G3UVU6 152 aa9.45□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Psmg4P0C7N9 123 aa9.45□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Prrx2Q06348 247 aa9.45□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Gm1968Q3T9I3 115 aa9.45□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Ighv1-55A0A075B5W6 117 aa9.44□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Q3UNZ8 350 aa9.44□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Dkk2Q9QYZ8 259 aa9.44□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Slc25a20Q9Z2Z6 301 aaKnown RBP9.44□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Ighv8-8A0A0A6YXQ0 119 aa9.44□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Map6d1Q14BB9 191 aa9.44□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Gm5150Q1AN92 299 aa9.44□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Fbxl15Q91W61 300 aa9.44□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Cysrt1Q9D1E4 142 aa9.44□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Lypd8Q9D7S0 255 aa9.44□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Wfdc2Q9DAU7 174 aa9.44□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Erg28Q9ERY9 140 aa9.44□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Ighv1-81A0A075B5Y4 117 aa9.44□□□□□ -0.9
Rfx1-201ENSMUST00000005600 KprpB2RUR4 657 aa9.44□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Gm33815A0A087WNV3 176 aa9.43□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Gm29644A0A087WPG2 191 aa9.43□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Gng4P50153 75 aa9.43□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Vsig8Q6P3A4 417 aa9.43□□□□□ -0.9
Rfx1-201ENSMUST00000005600 MycbQ6P8Z1 170 aa9.43□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Pygo1Q9D0P5 417 aa9.43□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Tmem238lA0A1B0GS74 79 aa9.43□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Amn1B8JKV0 258 aa9.43□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Ins1P01325 108 aa9.43□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Gm10604Q3V0X7 143 aa9.43□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Try10Q792Z1 246 aaKnown RBP9.43□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Vmn1r62Q8R2C0 300 aa9.43□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Vmn1r63Q9EPT1 300 aa9.43□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Ca2P00920 260 aaKnown RBP9.43□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Gm17430F6RSK3 157 aa9.42□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Cd5P13379 494 aa9.42□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Tmem136Q3TYE7 245 aa9.42□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Gm7489Q3UT34 171 aa9.42□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Khdc1aQ3UWR2 166 aa9.42□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Gm10118Q8C8J5 116 aa9.42□□□□□ -0.9
Rfx1-201ENSMUST00000005600 TdhQ8K3F7 373 aa9.42□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Spata45Q9CVW4 97 aa9.42□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Arpc1aQ9R0Q6 370 aa9.42□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Dopey1Q8BL99 2399 aa9.42□□□□□ -0.9
Rfx1-201ENSMUST00000005600 RbpjP31266 526 aa9.42□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Gm26566Q8CAC1 153 aa9.42□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Rasl10aQ8K5A4 203 aa9.42□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Rnf114Q9ET26 229 aa9.42□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Ovol3D3YYM0 189 aa9.42□□□□□ -0.9
Rfx1-201ENSMUST00000005600 PlnP61014 52 aa9.42□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Omt2bD3YX29 119 aa9.42□□□□□ -0.9
Rfx1-201ENSMUST00000005600 YrdcQ3U5F4 280 aa9.42□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Mcrip2Q9CQB2 160 aaKnown RBP9.42□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Gm26920S4R2A5 56 aa9.42□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Tcrg-V6A0A075B5Y8 134 aa9.41□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Ighv1-37A0A0A6YW32 117 aa9.41□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Thy1P01831 162 aa9.41□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Olfr553Q7TRS6 326 aa9.41□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Hes7Q8BKT2 225 aa9.41□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Mrpl16Q99N93 251 aa9.41□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Gnb1lQ9EQ15 326 aa9.41□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Zfp493E9Q1L8 384 aa9.41□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Prima1Q810F0 153 aa9.41□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Bhlha15Q9QYC3 197 aa9.41□□□□□ -0.9
Rfx1-201ENSMUST00000005600 Gm6525A0A0A6YW33 106 aa9.41□□□□□ -0.9
Rfx1-201ENSMUST00000005600 F930015N05RikQ8C3A3 210 aa9.41□□□□□ -0.9
Rfx1-201ENSMUST00000005600 UrahQ9CRB3 118 aa9.41□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms