RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Defa9P50707 93 aa12.81□□□□□ -0.36
Shh-201ENSMUST00000002708 Adam8Q05910 826 aa12.81□□□□□ -0.36
Shh-201ENSMUST00000002708 Rasl10aQ8K5A4 203 aa12.81□□□□□ -0.36
Shh-201ENSMUST00000002708 Rchy1Q9CR50 261 aa12.81□□□□□ -0.36
Shh-201ENSMUST00000002708 Stpg1Q9D2F5 341 aa12.81□□□□□ -0.36
Shh-201ENSMUST00000002708 CrxO54751 299 aa12.8□□□□□ -0.36
Shh-201ENSMUST00000002708 Defb33Q30KN3 62 aa12.8□□□□□ -0.36
Shh-201ENSMUST00000002708 Muc15Q8C6Z1 331 aa12.8□□□□□ -0.36
Shh-201ENSMUST00000002708 UrahQ9CRB3 118 aa12.8□□□□□ -0.36
Shh-201ENSMUST00000002708 Bhlha15Q9QYC3 197 aa12.8□□□□□ -0.36
Shh-201ENSMUST00000002708 Cspg4Q8VHY0 2327 aa12.8□□□□□ -0.36
Shh-201ENSMUST00000002708 Lynx1P0DP60 116 aa12.8□□□□□ -0.36
Shh-201ENSMUST00000002708 Borcs7Q9CRC6 105 aa12.8□□□□□ -0.36
Shh-201ENSMUST00000002708 Q9DAZ5 108 aa12.8□□□□□ -0.36
Shh-201ENSMUST00000002708 Tmem29A2ANF5 204 aa12.8□□□□□ -0.36
Shh-201ENSMUST00000002708 PpdpfQ9CR37 115 aa12.8□□□□□ -0.36
Shh-201ENSMUST00000002708 Q9D131 166 aa12.8□□□□□ -0.36
Shh-201ENSMUST00000002708 Mrpl53Q9D1H8 118 aaKnown RBP12.8□□□□□ -0.36
Shh-201ENSMUST00000002708 Gm5157A0A087WRH8 301 aa12.79□□□□□ -0.36
Shh-201ENSMUST00000002708 Rasl11aQ6IMB1 242 aa12.79□□□□□ -0.36
Shh-201ENSMUST00000002708 Olfr904Q7TRC9 310 aa12.79□□□□□ -0.36
Shh-201ENSMUST00000002708 Olfr1243Q8VGM7 305 aa12.79□□□□□ -0.36
Shh-201ENSMUST00000002708 Pgpep1lQ9CWB5 130 aa12.79□□□□□ -0.36
Shh-201ENSMUST00000002708 Rab9aQ9R0M6 201 aa12.79□□□□□ -0.36
Shh-201ENSMUST00000002708 Ighv8-8A0A0A6YXQ0 119 aa12.79□□□□□ -0.36
Shh-201ENSMUST00000002708 Gm45521A0A1B0GRK0 198 aa12.79□□□□□ -0.36
Shh-201ENSMUST00000002708 NpsP0C0P8 89 aa12.79□□□□□ -0.36
Shh-201ENSMUST00000002708 F2rl1P55086 399 aa12.79□□□□□ -0.36
Shh-201ENSMUST00000002708 Mrpl16Q99N93 251 aa12.79□□□□□ -0.36
Shh-201ENSMUST00000002708 Cend1Q9JKC6 149 aa12.79□□□□□ -0.36
Shh-201ENSMUST00000002708 Muc4Q8JZM8 3443 aa12.78□□□□□ -0.36
Shh-201ENSMUST00000002708 Trdv1A0A075B657 112 aa12.78□□□□□ -0.36
Shh-201ENSMUST00000002708 Fam24aQ8CF27 98 aa12.78□□□□□ -0.36
Shh-201ENSMUST00000002708 Arpc1aQ9R0Q6 370 aa12.78□□□□□ -0.36
Shh-201ENSMUST00000002708 Csmd2V9GX34 3611 aa12.78□□□□□ -0.36
Shh-201ENSMUST00000002708 Trav14n-2A0A0G2JDF5 121 aa12.78□□□□□ -0.36
Shh-201ENSMUST00000002708 Thy1P01831 162 aa12.78□□□□□ -0.36
Shh-201ENSMUST00000002708 E130116L18RikQ8BMV6 101 aa12.78□□□□□ -0.36
Shh-201ENSMUST00000002708 Vmn1r62Q8R2C0 300 aa12.78□□□□□ -0.36
Shh-201ENSMUST00000002708 Qrich2A0A140LIY9 2337 aa12.77□□□□□ -0.36
Shh-201ENSMUST00000002708 Klk15Q8CGR4 254 aa12.77□□□□□ -0.36
Shh-201ENSMUST00000002708 Dppa2Q9CWH0 301 aa12.77□□□□□ -0.36
Shh-201ENSMUST00000002708 P01725 110 aa12.77□□□□□ -0.37
Shh-201ENSMUST00000002708 RpeQ8VEE0 228 aa12.77□□□□□ -0.37
Shh-201ENSMUST00000002708 Malsu1Q9CWV0 228 aa12.77□□□□□ -0.37
Shh-201ENSMUST00000002708 Tmem219Q9D123 240 aa12.77□□□□□ -0.37
Shh-201ENSMUST00000002708 Esp38A8R0X1 80 aa12.76□□□□□ -0.37
Shh-201ENSMUST00000002708 Olfr1437Q7TQR7 312 aa12.76□□□□□ -0.37
Shh-201ENSMUST00000002708 Gm4763Q8CFJ5 196 aa12.76□□□□□ -0.37
Shh-201ENSMUST00000002708 Tspo2Q9CRZ8 162 aa12.76□□□□□ -0.37
Shh-201ENSMUST00000002708 SonQ9QX47 2444 aaKnown RBP12.76□□□□□ -0.37
Shh-201ENSMUST00000002708 Itpr1P11881 2749 aa12.76□□□□□ -0.37
Shh-201ENSMUST00000002708 Gm9970F6ZED4 185 aa12.76□□□□□ -0.37
Shh-201ENSMUST00000002708 Gm10190Q8BSD7 107 aa12.76□□□□□ -0.37
Shh-201ENSMUST00000002708 Olfr975Q8VG91 310 aa12.76□□□□□ -0.37
Shh-201ENSMUST00000002708 Tomm6Q9CQN3 74 aa12.76□□□□□ -0.37
Shh-201ENSMUST00000002708 Cysrt1Q9D1E4 142 aa12.76□□□□□ -0.37
Shh-201ENSMUST00000002708 Dkk2Q9QYZ8 259 aa12.76□□□□□ -0.37
Shh-201ENSMUST00000002708 Trav16nA0A075B634 117 aa12.75□□□□□ -0.37
Shh-201ENSMUST00000002708 Trav7-5A0A0G2JFX6 112 aa12.75□□□□□ -0.37
Shh-201ENSMUST00000002708 Omt2bD3YX29 119 aa12.75□□□□□ -0.37
Shh-201ENSMUST00000002708 Parm1Q923D3 296 aa12.75□□□□□ -0.37
Shh-201ENSMUST00000002708 Ube2l6Q9QZU9 153 aa12.75□□□□□ -0.37
Shh-201ENSMUST00000002708 Ncor2Q9WU42 2472 aaKnown RBP12.75□□□□□ -0.37
Shh-201ENSMUST00000002708 Ubr5Q80TP3 2792 aa12.75□□□□□ -0.37
Shh-201ENSMUST00000002708 Esp23A8R0V5 104 aa12.75□□□□□ -0.37
Shh-201ENSMUST00000002708 Defa13P50711 93 aa12.75□□□□□ -0.37
Shh-201ENSMUST00000002708 Znf575Q3TXZ1 239 aa12.75□□□□□ -0.37
Shh-201ENSMUST00000002708 Ly6g5bQ8K1T4 194 aa12.75□□□□□ -0.37
Shh-201ENSMUST00000002708 Cml3Q9JIY8 226 aa12.75□□□□□ -0.37
Shh-201ENSMUST00000002708 Mfge8P21956 463 aaKnown RBP12.75□□□□□ -0.37
Shh-201ENSMUST00000002708 PdpnQ62011 172 aa12.75□□□□□ -0.37
Shh-201ENSMUST00000002708 Rbfox3Q8BIF2 374 aa12.75□□□□□ -0.37
Shh-201ENSMUST00000002708 PerpQ9JK95 193 aa12.75□□□□□ -0.37
Shh-201ENSMUST00000002708 Gm16442D3YZG3 307 aa12.74□□□□□ -0.37
Shh-201ENSMUST00000002708 BC030500E9Q6W0 185 aa12.74□□□□□ -0.37
Shh-201ENSMUST00000002708 Trpt1Q8K3A2 249 aa12.74□□□□□ -0.37
Shh-201ENSMUST00000002708 Fbxl15Q91W61 300 aa12.74□□□□□ -0.37
Shh-201ENSMUST00000002708 Josd1Q9DBJ6 202 aa12.74□□□□□ -0.37
Shh-201ENSMUST00000002708 Vmn1r63Q9EPT1 300 aa12.74□□□□□ -0.37
Shh-201ENSMUST00000002708 Gm5105Q8C6Y9 112 aa12.74□□□□□ -0.37
Shh-201ENSMUST00000002708 Olfr981Q8VEU2 310 aa12.74□□□□□ -0.37
Shh-201ENSMUST00000002708 Tex48Q9DA81 110 aa12.74□□□□□ -0.37
Shh-201ENSMUST00000002708 Gnb1lQ9EQ15 326 aa12.74□□□□□ -0.37
Shh-201ENSMUST00000002708 Olfr235E9Q9Z6 312 aa12.73□□□□□ -0.37
Shh-201ENSMUST00000002708 Znf239P24399 201 aa12.73□□□□□ -0.37
Shh-201ENSMUST00000002708 Gm7489Q3UT34 171 aa12.73□□□□□ -0.37
Shh-201ENSMUST00000002708 Gm6040Q4QY32 63 aa12.73□□□□□ -0.37
Shh-201ENSMUST00000002708 Ubtd1Q91WB7 227 aa12.73□□□□□ -0.37
Shh-201ENSMUST00000002708 Ndufa11Q9D8B4 141 aa12.73□□□□□ -0.37
Shh-201ENSMUST00000002708 Smim13E9Q942 88 aa12.73□□□□□ -0.37
Shh-201ENSMUST00000002708 Ins1P01325 108 aa12.73□□□□□ -0.37
Shh-201ENSMUST00000002708 Cox8bP48772 70 aa12.73□□□□□ -0.37
Shh-201ENSMUST00000002708 Mrpl20Q9CQL4 149 aa12.73□□□□□ -0.37
Shh-201ENSMUST00000002708 CklfQ9DAS1 152 aa12.73□□□□□ -0.37
Shh-201ENSMUST00000002708 Plekhb2Q9QZC7 221 aa12.73□□□□□ -0.37
Shh-201ENSMUST00000002708 Gm15293D3YX02 93 aa12.72□□□□□ -0.37
Shh-201ENSMUST00000002708 P01748 117 aa12.72□□□□□ -0.37
Shh-201ENSMUST00000002708 TbpP29037 316 aa12.72□□□□□ -0.37
Shh-201ENSMUST00000002708 Gm10604Q3V0X7 143 aa12.72□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 78.8 ms