RNA–Protein interactions for RNA: ENST00000639496.1

KCNQ3-208, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 5

Gene KCNQ3, Length 4,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-208ENST00000639496 SEC61BP60468 96 aaKnown RBP6.37□□□□□ -1.39
KCNQ3-208ENST00000639496 MAP1AP78559 2803 aaPredicted RBP6.37□□□□□ -1.39
KCNQ3-208ENST00000639496 CSAG1Q6PB30 78 aa6.36□□□□□ -1.39
KCNQ3-208ENST00000639496 SPRR1AP35321 89 aa6.34□□□□□ -1.39
KCNQ3-208ENST00000639496 Q5VSD8 79 aa6.33□□□□□ -1.4
KCNQ3-208ENST00000639496 ZCCHC13Q8WW36 166 aaKnown RBP6.33□□□□□ -1.4
KCNQ3-208ENST00000639496 C5orf42Q9H799 3197 aa6.32□□□□□ -1.4
KCNQ3-208ENST00000639496 SPRR1BP22528 89 aa6.31□□□□□ -1.4
KCNQ3-208ENST00000639496 HRES1P13985 223 aa6.3□□□□□ -1.4
KCNQ3-208ENST00000639496 OCR1Q9BZK8 76 aa6.3□□□□□ -1.4
KCNQ3-208ENST00000639496 MGAQ8IWI9 3026 aa6.29□□□□□ -1.4
KCNQ3-208ENST00000639496 CHD7Q9P2D1 2997 aa6.29□□□□□ -1.4
KCNQ3-208ENST00000639496 A0A1B0GU33 70 aa6.28□□□□□ -1.4
KCNQ3-208ENST00000639496 KRTAP1-5Q9BYS1 174 aa6.28□□□□□ -1.4
KCNQ3-208ENST00000639496 DSPP15924 2871 aaKnown RBP6.26□□□□□ -1.41
KCNQ3-208ENST00000639496 KRTAP10-1P60331 282 aa6.26□□□□□ -1.41
KCNQ3-208ENST00000639496 MMP24-AS1A0A0U1RRL7 71 aa6.25□□□□□ -1.41
KCNQ3-208ENST00000639496 SPINK7P58062 85 aa6.25□□□□□ -1.41
KCNQ3-208ENST00000639496 LUZP6Q538Z0 58 aa6.24□□□□□ -1.41
KCNQ3-208ENST00000639496 TRANK1O15050 2925 aa6.24□□□□□ -1.41
KCNQ3-208ENST00000639496 S4R3F8 94 aa6.23□□□□□ -1.41
KCNQ3-208ENST00000639496 Q1T7F1 81 aa6.23□□□□□ -1.41
KCNQ3-208ENST00000639496 KRTAP10-2P60368 255 aa6.22□□□□□ -1.41
KCNQ3-208ENST00000639496 FP248Q71RG6 208 aaPredicted RBP6.22□□□□□ -1.41
KCNQ3-208ENST00000639496 OXTP01178 125 aa6.21□□□□□ -1.41
KCNQ3-208ENST00000639496 LINC00483Q53H64 154 aa6.21□□□□□ -1.41
KCNQ3-208ENST00000639496 LINC00472Q9H8W2 130 aa6.21□□□□□ -1.42
KCNQ3-208ENST00000639496 R4GN34 69 aa6.21□□□□□ -1.42
KCNQ3-208ENST00000639496 ITPR2Q14571 2701 aa6.21□□□□□ -1.42
KCNQ3-208ENST00000639496 Q8N9P0 234 aaPredicted RBP6.21□□□□□ -1.42
KCNQ3-208ENST00000639496 CHD9Q3L8U1 2897 aa6.19□□□□□ -1.42
KCNQ3-208ENST00000639496 KRTAP26-1Q6PEX3 210 aa6.19□□□□□ -1.42
KCNQ3-208ENST00000639496 Q8NDZ9 215 aa6.19□□□□□ -1.42
KCNQ3-208ENST00000639496 Q6ZR54 194 aa6.18□□□□□ -1.42
KCNQ3-208ENST00000639496 DMAC1Q96GE9 116 aa6.18□□□□□ -1.42
KCNQ3-208ENST00000639496 RANBP2P49792 3224 aaKnown RBP6.18□□□□□ -1.42
KCNQ3-208ENST00000639496 NBEAL2Q6ZNJ1 2754 aa6.18□□□□□ -1.42
KCNQ3-208ENST00000639496 Q5W150 140 aa6.18□□□□□ -1.42
KCNQ3-208ENST00000639496 A0A0C4DFX4 3053 aa6.17□□□□□ -1.42
KCNQ3-208ENST00000639496 LCA10Q71F78 164 aa6.17□□□□□ -1.42
KCNQ3-208ENST00000639496 KTN1-AS1Q86SY8 53 aa6.16□□□□□ -1.42
KCNQ3-208ENST00000639496 TENM4Q6N022 2769 aa6.16□□□□□ -1.42
KCNQ3-208ENST00000639496 FLNCQ14315 2725 aa6.16□□□□□ -1.42
KCNQ3-208ENST00000639496 HIVEP1P15822 2718 aa6.14□□□□□ -1.43
KCNQ3-208ENST00000639496 ITPR1Q14643 2758 aa6.13□□□□□ -1.43
KCNQ3-208ENST00000639496 FRYQ5TBA9 3013 aa6.12□□□□□ -1.43
KCNQ3-208ENST00000639496 LINC01558Q9Y6Z2 57 aa6.1□□□□□ -1.43
KCNQ3-208ENST00000639496 KRTAP21-3Q3LHN1 58 aa6.1□□□□□ -1.43
KCNQ3-208ENST00000639496 CFAP54Q96N23 3096 aa6.09□□□□□ -1.43
KCNQ3-208ENST00000639496 WDFY4Q6ZS81 3184 aa6.09□□□□□ -1.43
KCNQ3-208ENST00000639496 REV3LO60673 3130 aa6.09□□□□□ -1.43
KCNQ3-208ENST00000639496 KMT2BQ9UMN6 2715 aaPredicted RBP6.08□□□□□ -1.44
KCNQ3-208ENST00000639496 Q75L30 129 aa6.08□□□□□ -1.44
KCNQ3-208ENST00000639496 HTTP42858 3142 aa6.07□□□□□ -1.44
KCNQ3-208ENST00000639496 PANO1I0J062 215 aa6.05□□□□□ -1.44
KCNQ3-208ENST00000639496 UTP20O75691 2785 aaKnown RBP6.05□□□□□ -1.44
KCNQ3-208ENST00000639496 PLAC4Q8WY50 150 aa6.04□□□□□ -1.44
KCNQ3-208ENST00000639496 M0QZ58 72 aa6.03□□□□□ -1.44
KCNQ3-208ENST00000639496 KRTAP4-16G5E9R7 235 aaPredicted RBP6.02□□□□□ -1.45
KCNQ3-208ENST00000639496 A0A087X002 238 aa6.02□□□□□ -1.45
KCNQ3-208ENST00000639496 TRIOO75962 3097 aa6.02□□□□□ -1.45
KCNQ3-208ENST00000639496 RPL37P61927 97 aaKnown RBP6.01□□□□□ -1.45
KCNQ3-208ENST00000639496 TACC2O95359 2948 aa6□□□□□ -1.45
KCNQ3-208ENST00000639496 RPS29P62273 56 aaKnown RBP6□□□□□ -1.45
KCNQ3-208ENST00000639496 LAMA2P24043 3122 aaKnown RBP6□□□□□ -1.45
KCNQ3-208ENST00000639496 PRUNE2Q8WUY3 3088 aa5.99□□□□□ -1.45
KCNQ3-208ENST00000639496 MKI67P46013 3256 aaKnown RBP5.99□□□□□ -1.45
KCNQ3-208ENST00000639496 Q6ZRN7 208 aaPredicted RBP5.97□□□□□ -1.45
KCNQ3-208ENST00000639496 NIPBLQ6KC79 2804 aaeCLIP5.97□□□□□ -1.45
KCNQ3-208ENST00000639496 ASB16-AS1Q495Z4 193 aa5.95□□□□□ -1.46
KCNQ3-208ENST00000639496 BRCA2P51587 3418 aa5.95□□□□□ -1.46
KCNQ3-208ENST00000639496 LAMA3Q16787 3333 aa5.95□□□□□ -1.46
KCNQ3-208ENST00000639496 TENM3Q9P273 2699 aa5.92□□□□□ -1.46
KCNQ3-208ENST00000639496 H1FX-AS1Q4G0G2 97 aa5.92□□□□□ -1.46
KCNQ3-208ENST00000639496 ADM2Q7Z4H4 148 aa5.92□□□□□ -1.46
KCNQ3-208ENST00000639496 KRTAP29-1A8MX34 341 aaPredicted RBP5.9□□□□□ -1.46
KCNQ3-208ENST00000639496 Q5VV11 94 aa5.89□□□□□ -1.47
KCNQ3-208ENST00000639496 UNC80Q8N2C7 3258 aa5.89□□□□□ -1.47
KCNQ3-208ENST00000639496 ROMO1P60602 79 aa5.88□□□□□ -1.47
KCNQ3-208ENST00000639496 Q5XG85 94 aa5.87□□□□□ -1.47
KCNQ3-208ENST00000639496 DMXL2Q8TDJ6 3036 aa5.86□□□□□ -1.47
KCNQ3-208ENST00000639496 A0A0A0MQY5 61 aa5.84□□□□□ -1.47
KCNQ3-208ENST00000639496 COL12A1Q99715 3063 aa5.83□□□□□ -1.48
KCNQ3-208ENST00000639496 KRTAP11-1Q8IUC1 163 aa5.83□□□□□ -1.48
KCNQ3-208ENST00000639496 APCP25054 2843 aa5.82□□□□□ -1.48
KCNQ3-208ENST00000639496 KRTAP13-2Q52LG2 175 aa5.82□□□□□ -1.48
KCNQ3-208ENST00000639496 NOTCH2NLQ7Z3S9 236 aa5.82□□□□□ -1.48
KCNQ3-208ENST00000639496 C20orf166-AS1Q96NR2 134 aa5.82□□□□□ -1.48
KCNQ3-208ENST00000639496 CYSTM1Q9H1C7 97 aa5.82□□□□□ -1.48
KCNQ3-208ENST00000639496 PRAC1Q96KF2 57 aa5.81□□□□□ -1.48
KCNQ3-208ENST00000639496 ATMQ13315 3056 aa5.81□□□□□ -1.48
KCNQ3-208ENST00000639496 VPS13AQ96RL7 3174 aa5.8□□□□□ -1.48
KCNQ3-208ENST00000639496 A8MUU9 505 aa5.79□□□□□ -1.48
KCNQ3-208ENST00000639496 CELSR2Q9HCU4 2923 aa5.79□□□□□ -1.48
KCNQ3-208ENST00000639496 CRYBG3Q68DQ2 2970 aa5.79□□□□□ -1.48
KCNQ3-208ENST00000639496 KRTAP13-1Q8IUC0 172 aa5.79□□□□□ -1.48
KCNQ3-208ENST00000639496 SPATA8Q6RVD6 105 aa5.79□□□□□ -1.48
KCNQ3-208ENST00000639496 FRYLO94915 3013 aa5.79□□□□□ -1.48
KCNQ3-208ENST00000639496 XIRP2A4UGR9 3374 aa5.78□□□□□ -1.48
KCNQ3-208ENST00000639496 KRTAP7-1Q8IUC3 87 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms