RNA–Protein interactions for RNA: ENST00000638473.1

SCN3A-208, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,724 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-208ENST00000638473 A0A0G2JQZ4 141 aa2.78□□□□□ -1.96
SCN3A-208ENST00000638473 LINC00304Q8N9R0 145 aa2.78□□□□□ -1.96
SCN3A-208ENST00000638473 IGKV2D-30A0A075B6S6 120 aa2.78□□□□□ -1.96
SCN3A-208ENST00000638473 IGKV2-30P06310 120 aa2.78□□□□□ -1.96
SCN3A-208ENST00000638473 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.78□□□□□ -1.96
SCN3A-208ENST00000638473 DMXL2Q8TDJ6 3036 aa2.78□□□□□ -1.96
SCN3A-208ENST00000638473 DCHS1Q96JQ0 3298 aa2.78□□□□□ -1.96
SCN3A-208ENST00000638473 MUC3AQ02505 3323 aa2.78□□□□□ -1.96
SCN3A-208ENST00000638473 DSPP15924 2871 aaKnown RBP2.78□□□□□ -1.96
SCN3A-208ENST00000638473 C7orf65Q6ZTY9 151 aa2.78□□□□□ -1.97
SCN3A-208ENST00000638473 TENM3Q9P273 2699 aa2.77□□□□□ -1.97
SCN3A-208ENST00000638473 C1orf64Q8NEQ6 169 aa2.77□□□□□ -1.97
SCN3A-208ENST00000638473 LRBAP50851 2863 aa2.77□□□□□ -1.97
SCN3A-208ENST00000638473 H3BPC8 53 aa2.77□□□□□ -1.97
SCN3A-208ENST00000638473 SPRR4Q96PI1 79 aa2.77□□□□□ -1.97
SCN3A-208ENST00000638473 C9orf92A6NGG3 77 aa2.76□□□□□ -1.97
SCN3A-208ENST00000638473 A8MWP4 228 aa2.76□□□□□ -1.97
SCN3A-208ENST00000638473 C4orf26Q17RF5 130 aa2.76□□□□□ -1.97
SCN3A-208ENST00000638473 TP53AIP1Q9HCN2 124 aa2.76□□□□□ -1.97
SCN3A-208ENST00000638473 K7EQZ3 153 aa2.76□□□□□ -1.97
SCN3A-208ENST00000638473 DSCR10P59022 87 aa2.76□□□□□ -1.97
SCN3A-208ENST00000638473 ATMQ13315 3056 aa2.76□□□□□ -1.97
SCN3A-208ENST00000638473 SPINK1P00995 79 aa2.76□□□□□ -1.97
SCN3A-208ENST00000638473 KRTAP1-5Q9BYS1 174 aa2.75□□□□□ -1.97
SCN3A-208ENST00000638473 SPAG11AQ6PDA7 123 aa2.75□□□□□ -1.97
SCN3A-208ENST00000638473 SSBP3-AS1Q7Z2R9 100 aa2.75□□□□□ -1.97
SCN3A-208ENST00000638473 PSPHP1O15172 72 aa2.75□□□□□ -1.97
SCN3A-208ENST00000638473 ATP11AUNQ6ZP68 121 aa2.75□□□□□ -1.97
SCN3A-208ENST00000638473 SPENQ96T58 3664 aaKnown RBP2.74□□□□□ -1.97
SCN3A-208ENST00000638473 LINC01554Q52M75 96 aa2.74□□□□□ -1.97
SCN3A-208ENST00000638473 LCA10Q71F78 164 aa2.74□□□□□ -1.97
SCN3A-208ENST00000638473 NBPF19A0A087WUL8 3843 aa2.74□□□□□ -1.97
SCN3A-208ENST00000638473 SPINT4Q6UDR6 99 aa2.74□□□□□ -1.97
SCN3A-208ENST00000638473 RELNP78509 3460 aa2.74□□□□□ -1.97
SCN3A-208ENST00000638473 KRTAP26-1Q6PEX3 210 aa2.74□□□□□ -1.97
SCN3A-208ENST00000638473 PLAC8Q9NZF1 115 aa2.74□□□□□ -1.97
SCN3A-208ENST00000638473 OBSCN-AS1Q96MR7 158 aa2.74□□□□□ -1.97
SCN3A-208ENST00000638473 MRPL34Q9BQ48 92 aaKnown RBP2.73□□□□□ -1.97
SCN3A-208ENST00000638473 LCE6AA0A183 80 aa2.73□□□□□ -1.97
SCN3A-208ENST00000638473 SMG1Q96Q15 3661 aaKnown RBP2.73□□□□□ -1.97
SCN3A-208ENST00000638473 Q8NDZ9 215 aa2.73□□□□□ -1.97
SCN3A-208ENST00000638473 NBEAQ8NFP9 2946 aa2.72□□□□□ -1.97
SCN3A-208ENST00000638473 A0A1B0GVX0 72 aa2.72□□□□□ -1.97
SCN3A-208ENST00000638473 C8orf17Q9NRJ1 99 aa2.72□□□□□ -1.97
SCN3A-208ENST00000638473 LUZP6Q538Z0 58 aa2.72□□□□□ -1.97
SCN3A-208ENST00000638473 OCR1Q9BZK8 76 aa2.72□□□□□ -1.97
SCN3A-208ENST00000638473 KRTAP10-2P60368 255 aa2.72□□□□□ -1.97
SCN3A-208ENST00000638473 A0A087X002 238 aa2.72□□□□□ -1.97
SCN3A-208ENST00000638473 TRAV22A0A0B4J277 110 aa2.71□□□□□ -1.98
SCN3A-208ENST00000638473 NDUFAF8A1L188 74 aa2.71□□□□□ -1.98
SCN3A-208ENST00000638473 CFAP47Q6ZTR5 3102 aa2.71□□□□□ -1.98
SCN3A-208ENST00000638473 PRR15Q8IV56 129 aa2.71□□□□□ -1.98
SCN3A-208ENST00000638473 ACYP2P14621 99 aa2.71□□□□□ -1.98
SCN3A-208ENST00000638473 PRR26Q8N8Z3 221 aa2.71□□□□□ -1.98
SCN3A-208ENST00000638473 A0A1W2PNM2 257 aa2.7□□□□□ -1.98
SCN3A-208ENST00000638473 KRTAP16-1A8MUX0 517 aa2.7□□□□□ -1.98
SCN3A-208ENST00000638473 KRTAP10-1P60331 282 aa2.7□□□□□ -1.98
SCN3A-208ENST00000638473 CSMD1Q96PZ7 3565 aa2.7□□□□□ -1.98
SCN3A-208ENST00000638473 KRTAP21-3Q3LHN1 58 aa2.7□□□□□ -1.98
SCN3A-208ENST00000638473 ADGRG4Q8IZF6 3080 aa2.7□□□□□ -1.98
SCN3A-208ENST00000638473 ZZEF1O43149 2961 aa2.7□□□□□ -1.98
SCN3A-208ENST00000638473 IGLV5-48A0A075B6I7 105 aa2.69□□□□□ -1.98
SCN3A-208ENST00000638473 TACC2O95359 2948 aa2.69□□□□□ -1.98
SCN3A-208ENST00000638473 IGLV8-61A0A075B6I0 122 aa2.69□□□□□ -1.98
SCN3A-208ENST00000638473 Q5VSD8 79 aa2.68□□□□□ -1.98
SCN3A-208ENST00000638473 ANK3Q12955 4377 aaKnown RBP2.68□□□□□ -1.98
SCN3A-208ENST00000638473 LOC101927531A0A1B0GV80 90 aa2.68□□□□□ -1.98
SCN3A-208ENST00000638473 SPRR1AP35321 89 aa2.68□□□□□ -1.98
SCN3A-208ENST00000638473 Q6ZR54 194 aa2.68□□□□□ -1.98
SCN3A-208ENST00000638473 HIVEP1P15822 2718 aa2.68□□□□□ -1.98
SCN3A-208ENST00000638473 ZFHX3Q15911 3703 aa2.68□□□□□ -1.98
SCN3A-208ENST00000638473 TENM1Q9UKZ4 2725 aa2.67□□□□□ -1.98
SCN3A-208ENST00000638473 ASB16-AS1Q495Z4 193 aa2.67□□□□□ -1.98
SCN3A-208ENST00000638473 KALRNO60229 2985 aa2.67□□□□□ -1.98
SCN3A-208ENST00000638473 FAM229BQ4G0N7 80 aa2.67□□□□□ -1.98
SCN3A-208ENST00000638473 PANO1I0J062 215 aa2.67□□□□□ -1.98
SCN3A-208ENST00000638473 APCP25054 2843 aa2.66□□□□□ -1.98
SCN3A-208ENST00000638473 KLKP1Q107X0 134 aa2.66□□□□□ -1.98
SCN3A-208ENST00000638473 COX6B2Q6YFQ2 88 aa2.66□□□□□ -1.98
SCN3A-208ENST00000638473 A0A1B0GU69 56 aa2.66□□□□□ -1.98
SCN3A-208ENST00000638473 NF1P21359 2839 aa2.65□□□□□ -1.98
SCN3A-208ENST00000638473 CYP4F30PQ9H0H9 118 aa2.65□□□□□ -1.99
SCN3A-208ENST00000638473 NIPBLQ6KC79 2804 aaeCLIP2.64□□□□□ -1.99
SCN3A-208ENST00000638473 ITPR1Q14643 2758 aa2.64□□□□□ -1.99
SCN3A-208ENST00000638473 PRAC1Q96KF2 57 aa2.64□□□□□ -1.99
SCN3A-208ENST00000638473 COL12A1Q99715 3063 aa2.64□□□□□ -1.99
SCN3A-208ENST00000638473 Q6ZRN7 208 aaPredicted RBP2.64□□□□□ -1.99
SCN3A-208ENST00000638473 AKAP9Q99996 3911 aa2.64□□□□□ -1.99
SCN3A-208ENST00000638473 A8MUN3 132 aa2.64□□□□□ -1.99
SCN3A-208ENST00000638473 HRNRQ86YZ3 2850 aaPredicted RBP2.64□□□□□ -1.99
SCN3A-208ENST00000638473 RBM12B-AS1Q9P1G2 102 aa2.64□□□□□ -1.99
SCN3A-208ENST00000638473 VPS13CQ709C8 3753 aa2.64□□□□□ -1.99
SCN3A-208ENST00000638473 SPANXA2-OT1Q8N9U9 137 aa2.63□□□□□ -1.99
SCN3A-208ENST00000638473 LINC00483Q53H64 154 aa2.63□□□□□ -1.99
SCN3A-208ENST00000638473 COA5Q86WW8 74 aa2.63□□□□□ -1.99
SCN3A-208ENST00000638473 NBEAL2Q6ZNJ1 2754 aa2.62□□□□□ -1.99
SCN3A-208ENST00000638473 SVEP1Q4LDE5 3571 aa2.62□□□□□ -1.99
SCN3A-208ENST00000638473 SPRR1BP22528 89 aa2.62□□□□□ -1.99
SCN3A-208ENST00000638473 Q6ZSA8 131 aa2.61□□□□□ -1.99
SCN3A-208ENST00000638473 KRTAP11-1Q8IUC1 163 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms