RNA–Protein interactions for RNA: ENST00000638154.2

TCF4-290, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 7,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-290ENST00000638154 SPRR1AP35321 89 aa3.05□□□□□ -1.92
TCF4-290ENST00000638154 ZFHX3Q15911 3703 aa3.05□□□□□ -1.92
TCF4-290ENST00000638154 COL4A5P29400 1685 aa3.05□□□□□ -1.92
TCF4-290ENST00000638154 KRTAP24-1Q3LI83 254 aa3.05□□□□□ -1.92
TCF4-290ENST00000638154 KRTAP15-1Q3LI76 137 aa3.04□□□□□ -1.92
TCF4-290ENST00000638154 MYO18BQ8IUG5 2567 aa3.04□□□□□ -1.92
TCF4-290ENST00000638154 A0A0C4DFX4 3053 aa3.03□□□□□ -1.92
TCF4-290ENST00000638154 PRO2289Q9P1D8 64 aa3.03□□□□□ -1.92
TCF4-290ENST00000638154 USP9XQ93008 2570 aaPredicted RBP3.02□□□□□ -1.93
TCF4-290ENST00000638154 EPG5Q9HCE0 2579 aa3.01□□□□□ -1.93
TCF4-290ENST00000638154 INE1O15225 51 aa3.01□□□□□ -1.93
TCF4-290ENST00000638154 UTRNP46939 3433 aa3.01□□□□□ -1.93
TCF4-290ENST00000638154 WWC2-AS2Q96NR7 200 aa3.01□□□□□ -1.93
TCF4-290ENST00000638154 RYR1P21817 5038 aa3□□□□□ -1.93
TCF4-290ENST00000638154 BDP1A6H8Y1 2624 aa3□□□□□ -1.93
TCF4-290ENST00000638154 TPRXLQ17RH7 258 aa2.99□□□□□ -1.93
TCF4-290ENST00000638154 MTORP42345 2549 aa2.99□□□□□ -1.93
TCF4-290ENST00000638154 HECTD1Q9ULT8 2610 aa2.99□□□□□ -1.93
TCF4-290ENST00000638154 CHD8Q9HCK8 2581 aa2.97□□□□□ -1.93
TCF4-290ENST00000638154 PRRC2CQ9Y520 2896 aaKnown RBP2.96□□□□□ -1.93
TCF4-290ENST00000638154 TNP1P09430 55 aa2.96□□□□□ -1.94
TCF4-290ENST00000638154 CHD6Q8TD26 2715 aa2.94□□□□□ -1.94
TCF4-290ENST00000638154 J3QKU1 62 aa2.94□□□□□ -1.94
TCF4-290ENST00000638154 SETD2Q9BYW2 2564 aaPredicted RBP2.93□□□□□ -1.94
TCF4-290ENST00000638154 PCLOQ9Y6V0 5065 aa2.93□□□□□ -1.94
TCF4-290ENST00000638154 MGAQ8IWI9 3026 aa2.93□□□□□ -1.94
TCF4-290ENST00000638154 CENPEQ02224 2701 aa2.91□□□□□ -1.94
TCF4-290ENST00000638154 BAHCC1Q9P281 2608 aa2.9□□□□□ -1.95
TCF4-290ENST00000638154 USP34Q70CQ2 3546 aa2.89□□□□□ -1.95
TCF4-290ENST00000638154 C5orf42Q9H799 3197 aa2.89□□□□□ -1.95
TCF4-290ENST00000638154 FREM2Q5SZK8 3169 aa2.89□□□□□ -1.95
TCF4-290ENST00000638154 GOLGB1Q14789 3259 aaKnown RBP2.88□□□□□ -1.95
TCF4-290ENST00000638154 REV3LO60673 3130 aa2.87□□□□□ -1.95
TCF4-290ENST00000638154 DSPP15924 2871 aaKnown RBP2.86□□□□□ -1.95
TCF4-290ENST00000638154 FASNP49327 2511 aaKnown RBP2.86□□□□□ -1.95
TCF4-290ENST00000638154 COL6A5A8TX70 2615 aa2.86□□□□□ -1.95
TCF4-290ENST00000638154 PIEZO2Q9H5I5 2752 aa2.86□□□□□ -1.95
TCF4-290ENST00000638154 Q6ZRN7 208 aaPredicted RBP2.84□□□□□ -1.95
TCF4-290ENST00000638154 SMR3BP02814 79 aaPredicted RBP2.82□□□□□ -1.96
TCF4-290ENST00000638154 NOTCH1P46531 2555 aa2.82□□□□□ -1.96
TCF4-290ENST00000638154 KRTAP12-2P59991 146 aa2.81□□□□□ -1.96
TCF4-290ENST00000638154 SMR3AQ99954 134 aa2.81□□□□□ -1.96
TCF4-290ENST00000638154 CHD9Q3L8U1 2897 aa2.81□□□□□ -1.96
TCF4-290ENST00000638154 NSD1Q96L73 2696 aaPredicted RBP2.81□□□□□ -1.96
TCF4-290ENST00000638154 SRRM2Q9UQ35 2752 aaKnown RBP2.81□□□□□ -1.96
TCF4-290ENST00000638154 DNAH14Q0VDD8 3507 aa2.8□□□□□ -1.96
TCF4-290ENST00000638154 CFAP46Q8IYW2 2715 aa2.79□□□□□ -1.96
TCF4-290ENST00000638154 AKAP13Q12802 2813 aa2.79□□□□□ -1.96
TCF4-290ENST00000638154 M0R2T5 61 aa2.78□□□□□ -1.96
TCF4-290ENST00000638154 ITPR1Q14643 2758 aa2.78□□□□□ -1.96
TCF4-290ENST00000638154 XIRP2A4UGR9 3374 aa2.77□□□□□ -1.97
TCF4-290ENST00000638154 LRBAP50851 2863 aa2.77□□□□□ -1.97
TCF4-290ENST00000638154 RANBP2P49792 3224 aaKnown RBP2.77□□□□□ -1.97
TCF4-290ENST00000638154 CFAP54Q96N23 3096 aa2.77□□□□□ -1.97
TCF4-290ENST00000638154 CENPFP49454 3210 aa2.77□□□□□ -1.97
TCF4-290ENST00000638154 CEP350Q5VT06 3117 aa2.76□□□□□ -1.97
TCF4-290ENST00000638154 NBEAL1Q6ZS30 2694 aa2.75□□□□□ -1.97
TCF4-290ENST00000638154 HELZ2Q9BYK8 2649 aaKnown RBP2.75□□□□□ -1.97
TCF4-290ENST00000638154 STAB2Q8WWQ8 2551 aa2.74□□□□□ -1.97
TCF4-290ENST00000638154 KRTAP10-9P60411 292 aa2.73□□□□□ -1.97
TCF4-290ENST00000638154 LAMA2P24043 3122 aaKnown RBP2.73□□□□□ -1.97
TCF4-290ENST00000638154 USP24Q9UPU5 2620 aa2.72□□□□□ -1.97
TCF4-290ENST00000638154 PRUNE2Q8WUY3 3088 aa2.72□□□□□ -1.97
TCF4-290ENST00000638154 KRTAP13-2Q52LG2 175 aa2.71□□□□□ -1.97
TCF4-290ENST00000638154 KRTAP10-11P60412 298 aa2.71□□□□□ -1.98
TCF4-290ENST00000638154 CHD7Q9P2D1 2997 aa2.71□□□□□ -1.98
TCF4-290ENST00000638154 KRTAP7-1Q8IUC3 87 aa2.71□□□□□ -1.98
TCF4-290ENST00000638154 KALRNO60229 2985 aa2.7□□□□□ -1.98
TCF4-290ENST00000638154 UTP20O75691 2785 aaKnown RBP2.7□□□□□ -1.98
TCF4-290ENST00000638154 KRTAP12-1P59990 96 aa2.7□□□□□ -1.98
TCF4-290ENST00000638154 KRTAP13-4Q3LI77 160 aa2.7□□□□□ -1.98
TCF4-290ENST00000638154 DNAH12Q6ZR08 3092 aa2.69□□□□□ -1.98
TCF4-290ENST00000638154 CELSR2Q9HCU4 2923 aa2.69□□□□□ -1.98
TCF4-290ENST00000638154 USP9YO00507 2555 aaPredicted RBP2.69□□□□□ -1.98
TCF4-290ENST00000638154 MGAM2Q2M2H8 2515 aa2.69□□□□□ -1.98
TCF4-290ENST00000638154 STAB1Q9NY15 2570 aa2.68□□□□□ -1.98
TCF4-290ENST00000638154 UBR5O95071 2799 aaPredicted RBP2.68□□□□□ -1.98
TCF4-290ENST00000638154 SZT2Q5T011 3432 aa2.68□□□□□ -1.98
TCF4-290ENST00000638154 TEP1Q99973 2627 aaKnown RBP2.68□□□□□ -1.98
TCF4-290ENST00000638154 HYDINQ4G0P3 5121 aa2.67□□□□□ -1.98
TCF4-290ENST00000638154 Q5VSD8 79 aa2.67□□□□□ -1.98
TCF4-290ENST00000638154 ZNF292O60281 2723 aa2.66□□□□□ -1.98
TCF4-290ENST00000638154 CEP295Q9C0D2 2601 aa2.66□□□□□ -1.98
TCF4-290ENST00000638154 CDH23Q9H251 3354 aa2.66□□□□□ -1.98
TCF4-290ENST00000638154 WDFY3Q8IZQ1 3526 aa2.66□□□□□ -1.98
TCF4-290ENST00000638154 BRCA2P51587 3418 aa2.66□□□□□ -1.98
TCF4-290ENST00000638154 UNC79Q9P2D8 2635 aa2.65□□□□□ -1.98
TCF4-290ENST00000638154 VPS13AQ96RL7 3174 aa2.65□□□□□ -1.99
TCF4-290ENST00000638154 TRANK1O15050 2925 aa2.65□□□□□ -1.99
TCF4-290ENST00000638154 SETXQ7Z333 2677 aaKnown RBP2.65□□□□□ -1.99
TCF4-290ENST00000638154 KRTAP13-3Q3SY46 172 aa2.65□□□□□ -1.99
TCF4-290ENST00000638154 XP32Q5T750 250 aa2.65□□□□□ -1.99
TCF4-290ENST00000638154 APCP25054 2843 aa2.64□□□□□ -1.99
TCF4-290ENST00000638154 DMDP11532 3685 aa2.64□□□□□ -1.99
TCF4-290ENST00000638154 COL6A3P12111 3177 aa2.64□□□□□ -1.99
TCF4-290ENST00000638154 KRTAP10-3P60369 221 aa2.64□□□□□ -1.99
TCF4-290ENST00000638154 EP400Q96L91 3159 aa2.63□□□□□ -1.99
TCF4-290ENST00000638154 GCN1Q92616 2671 aaKnown RBP2.63□□□□□ -1.99
TCF4-290ENST00000638154 TNRC18O15417 2968 aaPredicted RBP2.63□□□□□ -1.99
TCF4-290ENST00000638154 KRTAP13-1Q8IUC0 172 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms