RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 Q5W150 140 aa10.34□□□□□ -0.75
CACNA1A-253ENST00000637927 Q8NDZ9 215 aa10.29□□□□□ -0.76
CACNA1A-253ENST00000637927 OCR1Q9BZK8 76 aa10.29□□□□□ -0.76
CACNA1A-253ENST00000637927 FLG2Q5D862 2391 aaPredicted RBP10.29□□□□□ -0.76
CACNA1A-253ENST00000637927 KRTAP10-2P60368 255 aa10.28□□□□□ -0.76
CACNA1A-253ENST00000637927 ROMO1P60602 79 aa10.28□□□□□ -0.76
CACNA1A-253ENST00000637927 PRRC2CQ9Y520 2896 aaKnown RBP10.26□□□□□ -0.77
CACNA1A-253ENST00000637927 KRTAP10-1P60331 282 aa10.24□□□□□ -0.77
CACNA1A-253ENST00000637927 MAST4O15021 2626 aa10.22□□□□□ -0.77
CACNA1A-253ENST00000637927 PLAC8Q9NZF1 115 aa10.21□□□□□ -0.77
CACNA1A-253ENST00000637927 MMP24-AS1A0A0U1RRL7 71 aa10.21□□□□□ -0.78
CACNA1A-253ENST00000637927 Q75L30 129 aa10.21□□□□□ -0.78
CACNA1A-253ENST00000637927 CFAP54Q96N23 3096 aa10.19□□□□□ -0.78
CACNA1A-253ENST00000637927 RPL37P61927 97 aaKnown RBP10.19□□□□□ -0.78
CACNA1A-253ENST00000637927 BRCA2P51587 3418 aa10.18□□□□□ -0.78
CACNA1A-253ENST00000637927 KRTAP1-5Q9BYS1 174 aa10.17□□□□□ -0.78
CACNA1A-253ENST00000637927 CELSR3Q9NYQ7 3312 aa10.16□□□□□ -0.78
CACNA1A-253ENST00000637927 HTTP42858 3142 aa10.14□□□□□ -0.79
CACNA1A-253ENST00000637927 LINC01558Q9Y6Z2 57 aa10.14□□□□□ -0.79
CACNA1A-253ENST00000637927 CYSTM1Q9H1C7 97 aa10.1□□□□□ -0.79
CACNA1A-253ENST00000637927 DNAH14Q0VDD8 3507 aa10.09□□□□□ -0.79
CACNA1A-253ENST00000637927 A8MU10 97 aa10.09□□□□□ -0.79
CACNA1A-253ENST00000637927 Q5VV11 94 aa10.09□□□□□ -0.79
CACNA1A-253ENST00000637927 LAMA3Q16787 3333 aa10.08□□□□□ -0.8
CACNA1A-253ENST00000637927 RANBP2P49792 3224 aaKnown RBP10.07□□□□□ -0.8
CACNA1A-253ENST00000637927 C10orf95Q9H7T3 257 aa10.05□□□□□ -0.8
CACNA1A-253ENST00000637927 CHD7Q9P2D1 2997 aa10.05□□□□□ -0.8
CACNA1A-253ENST00000637927 A0A1B0GVY2 172 aa10.04□□□□□ -0.8
CACNA1A-253ENST00000637927 CDH23Q9H251 3354 aa10.01□□□□□ -0.81
CACNA1A-253ENST00000637927 TRIOO75962 3097 aa10□□□□□ -0.81
CACNA1A-253ENST00000637927 PANO1I0J062 215 aa9.99□□□□□ -0.81
CACNA1A-253ENST00000637927 Q6ZR54 194 aa9.99□□□□□ -0.81
CACNA1A-253ENST00000637927 LAMA2P24043 3122 aaKnown RBP9.99□□□□□ -0.81
CACNA1A-253ENST00000637927 LCE6AA0A183 80 aa9.98□□□□□ -0.81
CACNA1A-253ENST00000637927 A8MUU9 505 aa9.98□□□□□ -0.81
CACNA1A-253ENST00000637927 SZT2Q5T011 3432 aa9.97□□□□□ -0.81
CACNA1A-253ENST00000637927 LINC00472Q9H8W2 130 aa9.97□□□□□ -0.81
CACNA1A-253ENST00000637927 KRTAP26-1Q6PEX3 210 aa9.97□□□□□ -0.81
CACNA1A-253ENST00000637927 FREM2Q5SZK8 3169 aa9.95□□□□□ -0.82
CACNA1A-253ENST00000637927 PRUNE2Q8WUY3 3088 aa9.95□□□□□ -0.82
CACNA1A-253ENST00000637927 ITPR3Q14573 2671 aa9.94□□□□□ -0.82
CACNA1A-253ENST00000637927 SPRR1AP35321 89 aa9.94□□□□□ -0.82
CACNA1A-253ENST00000637927 FLNAP21333 2647 aaKnown RBP9.94□□□□□ -0.82
CACNA1A-253ENST00000637927 A0A087X002 238 aa9.92□□□□□ -0.82
CACNA1A-253ENST00000637927 A0A0C4DFX4 3053 aa9.92□□□□□ -0.82
CACNA1A-253ENST00000637927 KRTAP16-1A8MUX0 517 aa9.92□□□□□ -0.82
CACNA1A-253ENST00000637927 Q5XG85 94 aa9.92□□□□□ -0.82
CACNA1A-253ENST00000637927 OXTP01178 125 aa9.9□□□□□ -0.82
CACNA1A-253ENST00000637927 UNC80Q8N2C7 3258 aa9.89□□□□□ -0.83
CACNA1A-253ENST00000637927 STAB1Q9NY15 2570 aa9.88□□□□□ -0.83
CACNA1A-253ENST00000637927 SPRR1BP22528 89 aa9.87□□□□□ -0.83
CACNA1A-253ENST00000637927 AKAP13Q12802 2813 aa9.86□□□□□ -0.83
CACNA1A-253ENST00000637927 REV3LO60673 3130 aa9.85□□□□□ -0.83
CACNA1A-253ENST00000637927 NDUFAF8A1L188 74 aa9.85□□□□□ -0.83
CACNA1A-253ENST00000637927 NOTCH2NLQ7Z3S9 236 aa9.84□□□□□ -0.83
CACNA1A-253ENST00000637927 HELZ2Q9BYK8 2649 aaKnown RBP9.82□□□□□ -0.84
CACNA1A-253ENST00000637927 CHD9Q3L8U1 2897 aa9.79□□□□□ -0.84
CACNA1A-253ENST00000637927 CFAP46Q8IYW2 2715 aa9.79□□□□□ -0.84
CACNA1A-253ENST00000637927 KRTAP10-8P60410 259 aa9.79□□□□□ -0.84
CACNA1A-253ENST00000637927 COL6A3P12111 3177 aa9.78□□□□□ -0.84
CACNA1A-253ENST00000637927 MGAQ8IWI9 3026 aa9.74□□□□□ -0.85
CACNA1A-253ENST00000637927 SETXQ7Z333 2677 aaKnown RBP9.73□□□□□ -0.85
CACNA1A-253ENST00000637927 KRTAP11-1Q8IUC1 163 aa9.71□□□□□ -0.86
CACNA1A-253ENST00000637927 WDFY4Q6ZS81 3184 aa9.7□□□□□ -0.86
CACNA1A-253ENST00000637927 CENPEQ02224 2701 aa9.7□□□□□ -0.86
CACNA1A-253ENST00000637927 CHD6Q8TD26 2715 aa9.7□□□□□ -0.86
CACNA1A-253ENST00000637927 TEX15Q9BXT5 2789 aa9.69□□□□□ -0.86
CACNA1A-253ENST00000637927 VPS13AQ96RL7 3174 aa9.69□□□□□ -0.86
CACNA1A-253ENST00000637927 TEP1Q99973 2627 aaKnown RBP9.68□□□□□ -0.86
CACNA1A-253ENST00000637927 NBEAL1Q6ZS30 2694 aa9.66□□□□□ -0.86
CACNA1A-253ENST00000637927 TRANK1O15050 2925 aa9.63□□□□□ -0.87
CACNA1A-253ENST00000637927 TNP1P09430 55 aa9.63□□□□□ -0.87
CACNA1A-253ENST00000637927 KRTAP25-1Q3LHN0 102 aa9.6□□□□□ -0.87
CACNA1A-253ENST00000637927 VCANP13611 3396 aa9.58□□□□□ -0.88
CACNA1A-253ENST00000637927 P0C880 135 aa9.56□□□□□ -0.88
CACNA1A-253ENST00000637927 KRTAP4-16G5E9R7 235 aaPredicted RBP9.55□□□□□ -0.88
CACNA1A-253ENST00000637927 DMBT1Q9UGM3 2413 aaPredicted RBP9.53□□□□□ -0.88
CACNA1A-253ENST00000637927 STAB2Q8WWQ8 2551 aa9.53□□□□□ -0.88
CACNA1A-253ENST00000637927 CFAP47Q6ZTR5 3102 aa9.52□□□□□ -0.89
CACNA1A-253ENST00000637927 SPEGQ15772 3267 aa9.5□□□□□ -0.89
CACNA1A-253ENST00000637927 UNC79Q9P2D8 2635 aa9.46□□□□□ -0.89
CACNA1A-253ENST00000637927 KRTAP29-1A8MX34 341 aaPredicted RBP9.46□□□□□ -0.9
CACNA1A-253ENST00000637927 SPTBN5Q9NRC6 3674 aaKnown RBP9.44□□□□□ -0.9
CACNA1A-253ENST00000637927 NOTCH1P46531 2555 aa9.44□□□□□ -0.9
CACNA1A-253ENST00000637927 FRYQ5TBA9 3013 aa9.43□□□□□ -0.9
CACNA1A-253ENST00000637927 CRYBG3Q68DQ2 2970 aa9.43□□□□□ -0.9
CACNA1A-253ENST00000637927 KRTAP10-10P60014 251 aa9.42□□□□□ -0.9
CACNA1A-253ENST00000637927 KRTAP13-2Q52LG2 175 aa9.42□□□□□ -0.9
CACNA1A-253ENST00000637927 USP34Q70CQ2 3546 aa9.41□□□□□ -0.9
CACNA1A-253ENST00000637927 LAMA1P25391 3075 aa9.4□□□□□ -0.9
CACNA1A-253ENST00000637927 KRTAP7-1Q8IUC3 87 aa9.4□□□□□ -0.9
CACNA1A-253ENST00000637927 COL6A5A8TX70 2615 aa9.38□□□□□ -0.91
CACNA1A-253ENST00000637927 Q6ZRN7 208 aaPredicted RBP9.37□□□□□ -0.91
CACNA1A-253ENST00000637927 BAHCC1Q9P281 2608 aa9.34□□□□□ -0.91
CACNA1A-253ENST00000637927 GCN1Q92616 2671 aaKnown RBP9.34□□□□□ -0.92
CACNA1A-253ENST00000637927 EYSQ5T1H1 3165 aa9.33□□□□□ -0.92
CACNA1A-253ENST00000637927 KALRNO60229 2985 aa9.31□□□□□ -0.92
CACNA1A-253ENST00000637927 MAP1AP78559 2803 aaPredicted RBP9.29□□□□□ -0.92
CACNA1A-253ENST00000637927 NBEAL2Q6ZNJ1 2754 aa9.28□□□□□ -0.92
CACNA1A-253ENST00000637927 MYO15AQ9UKN7 3530 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 382.7 ms