RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-223ENST00000637293 CHD9Q3L8U1 2897 aa0.81□□□□□ -2.28
GABRB3-223ENST00000637293 HELZ2Q9BYK8 2649 aaKnown RBP0.81□□□□□ -2.28
GABRB3-223ENST00000637293 KRTAP5-8O75690 187 aa0.81□□□□□ -2.28
GABRB3-223ENST00000637293 NOP10Q9NPE3 64 aaKnown RBP0.81□□□□□ -2.28
GABRB3-223ENST00000637293 PRLHP81277 87 aa0.8□□□□□ -2.28
GABRB3-223ENST00000637293 DEFB106AQ8N104 65 aa0.8□□□□□ -2.28
GABRB3-223ENST00000637293 S4R3F8 94 aa0.8□□□□□ -2.28
GABRB3-223ENST00000637293 TRANK1O15050 2925 aa0.8□□□□□ -2.28
GABRB3-223ENST00000637293 ABCA12Q86UK0 2595 aa0.8□□□□□ -2.28
GABRB3-223ENST00000637293 GVINP1Q7Z2Y8 2422 aa0.79□□□□□ -2.28
GABRB3-223ENST00000637293 REV3LO60673 3130 aa0.79□□□□□ -2.28
GABRB3-223ENST00000637293 LCE3AQ5TA76 89 aa0.79□□□□□ -2.28
GABRB3-223ENST00000637293 KNL1Q8NG31 2342 aa0.79□□□□□ -2.28
GABRB3-223ENST00000637293 OBSCNQ5VST9 7968 aa0.79□□□□□ -2.28
GABRB3-223ENST00000637293 PDE4DIPQ5VU43 2346 aa0.78□□□□□ -2.28
GABRB3-223ENST00000637293 F8P00451 2351 aa0.78□□□□□ -2.28
GABRB3-223ENST00000637293 ABCA2Q9BZC7 2435 aa0.78□□□□□ -2.28
GABRB3-223ENST00000637293 ALMS1Q8TCU4 4167 aa0.78□□□□□ -2.28
GABRB3-223ENST00000637293 H0YGG7 62 aa0.78□□□□□ -2.28
GABRB3-223ENST00000637293 SPINK6Q6UWN8 80 aa0.78□□□□□ -2.28
GABRB3-223ENST00000637293 MUC6Q6W4X9 2439 aa0.78□□□□□ -2.28
GABRB3-223ENST00000637293 DSPP15924 2871 aaKnown RBP0.78□□□□□ -2.29
GABRB3-223ENST00000637293 CELSR2Q9HCU4 2923 aa0.77□□□□□ -2.29
GABRB3-223ENST00000637293 MMP24-AS1A0A0U1RRL7 71 aa0.77□□□□□ -2.29
GABRB3-223ENST00000637293 IGF2RP11717 2491 aa0.77□□□□□ -2.29
GABRB3-223ENST00000637293 POLR2KP53803 58 aaKnown RBP0.76□□□□□ -2.29
GABRB3-223ENST00000637293 PCNX1Q96RV3 2341 aa0.76□□□□□ -2.29
GABRB3-223ENST00000637293 SPINK1P00995 79 aa0.75□□□□□ -2.29
GABRB3-223ENST00000637293 CSPG4Q6UVK1 2322 aa0.75□□□□□ -2.29
GABRB3-223ENST00000637293 BDP1A6H8Y1 2624 aa0.74□□□□□ -2.29
GABRB3-223ENST00000637293 AKAP6Q13023 2319 aa0.74□□□□□ -2.29
GABRB3-223ENST00000637293 DEFB135Q30KP9 77 aa0.74□□□□□ -2.29
GABRB3-223ENST00000637293 TENM4Q6N022 2769 aa0.73□□□□□ -2.29
GABRB3-223ENST00000637293 A8MTW9 85 aa0.73□□□□□ -2.29
GABRB3-223ENST00000637293 M0QY20 66 aa0.73□□□□□ -2.29
GABRB3-223ENST00000637293 RPL39P62891 51 aaKnown RBP0.73□□□□□ -2.29
GABRB3-223ENST00000637293 PIEZO1Q92508 2521 aa0.73□□□□□ -2.29
GABRB3-223ENST00000637293 M0R2T5 61 aa0.72□□□□□ -2.29
GABRB3-223ENST00000637293 SPTA1P02549 2419 aa0.72□□□□□ -2.29
GABRB3-223ENST00000637293 ATRQ13535 2644 aa0.71□□□□□ -2.3
GABRB3-223ENST00000637293 ARHGAP5-AS1Q96IT6 56 aa0.71□□□□□ -2.3
GABRB3-223ENST00000637293 PRRC2CQ9Y520 2896 aaKnown RBP0.71□□□□□ -2.3
GABRB3-223ENST00000637293 VWFP04275 2813 aa0.7□□□□□ -2.3
GABRB3-223ENST00000637293 SMR3AQ99954 134 aa0.7□□□□□ -2.3
GABRB3-223ENST00000637293 U3KQA8 63 aa0.7□□□□□ -2.3
GABRB3-223ENST00000637293 CEP290O15078 2479 aa0.7□□□□□ -2.3
GABRB3-223ENST00000637293 CHD6Q8TD26 2715 aa0.69□□□□□ -2.3
GABRB3-223ENST00000637293 A0A0C4DFX4 3053 aa0.69□□□□□ -2.3
GABRB3-223ENST00000637293 KRTAP5-5Q701N2 237 aaPredicted RBP0.69□□□□□ -2.3
GABRB3-223ENST00000637293 RPL39LQ96EH5 51 aaKnown RBP0.69□□□□□ -2.3
GABRB3-223ENST00000637293 HECTD1Q9ULT8 2610 aa0.69□□□□□ -2.3
GABRB3-223ENST00000637293 AKAP13Q12802 2813 aa0.69□□□□□ -2.3
GABRB3-223ENST00000637293 M0QZ58 72 aa0.68□□□□□ -2.3
GABRB3-223ENST00000637293 CLPSL2Q6UWE3 100 aa0.68□□□□□ -2.3
GABRB3-223ENST00000637293 C9orf92A6NGG3 77 aa0.67□□□□□ -2.3
GABRB3-223ENST00000637293 LCE1CQ5T751 118 aa0.67□□□□□ -2.3
GABRB3-223ENST00000637293 LCE1BQ5T7P3 118 aa0.67□□□□□ -2.3
GABRB3-223ENST00000637293 PKD1L2Q7Z442 2459 aa0.67□□□□□ -2.3
GABRB3-223ENST00000637293 NOTCH2Q04721 2471 aa0.66□□□□□ -2.3
GABRB3-223ENST00000637293 APCP25054 2843 aa0.66□□□□□ -2.3
GABRB3-223ENST00000637293 CREBBPQ92793 2442 aa0.66□□□□□ -2.3
GABRB3-223ENST00000637293 OTOGQ6ZRI0 2925 aa0.65□□□□□ -2.3
GABRB3-223ENST00000637293 CHD8Q9HCK8 2581 aa0.65□□□□□ -2.3
GABRB3-223ENST00000637293 KRTAP2-3P0C7H8 128 aa0.65□□□□□ -2.31
GABRB3-223ENST00000637293 KRTAP2-4Q9BYR9 128 aa0.65□□□□□ -2.31
GABRB3-223ENST00000637293 KRTAP2-1Q9BYU5 128 aa0.65□□□□□ -2.31
GABRB3-223ENST00000637293 TOMM7Q9P0U1 55 aa0.65□□□□□ -2.31
GABRB3-223ENST00000637293 CSMD3Q7Z407 3707 aa0.65□□□□□ -2.31
GABRB3-223ENST00000637293 EP300Q09472 2414 aaPredicted RBP0.65□□□□□ -2.31
GABRB3-223ENST00000637293 FBN2P35556 2912 aa0.65□□□□□ -2.31
GABRB3-223ENST00000637293 SRRM2Q9UQ35 2752 aaKnown RBP0.64□□□□□ -2.31
GABRB3-223ENST00000637293 KRTAP19-3Q7Z4W3 81 aa0.64□□□□□ -2.31
GABRB3-223ENST00000637293 PTPN13Q12923 2485 aa0.64□□□□□ -2.31
GABRB3-223ENST00000637293 LEAP2Q969E1 77 aa0.63□□□□□ -2.31
GABRB3-223ENST00000637293 UNC79Q9P2D8 2635 aa0.62□□□□□ -2.31
GABRB3-223ENST00000637293 TNP1P09430 55 aa0.62□□□□□ -2.31
GABRB3-223ENST00000637293 PRCDQ00LT1 54 aa0.62□□□□□ -2.31
GABRB3-223ENST00000637293 NCOR1O75376 2440 aa0.62□□□□□ -2.31
GABRB3-223ENST00000637293 LINC01590Q5TEZ4 76 aa0.61□□□□□ -2.31
GABRB3-223ENST00000637293 TNRC18O15417 2968 aaPredicted RBP0.61□□□□□ -2.31
GABRB3-223ENST00000637293 FBN3Q75N90 2809 aa0.6□□□□□ -2.31
GABRB3-223ENST00000637293 ZFYVE26Q68DK2 2539 aa0.6□□□□□ -2.31
GABRB3-223ENST00000637293 TTTY10Q9BZA0 68 aa0.6□□□□□ -2.31
GABRB3-223ENST00000637293 MAP1BP46821 2468 aaKnown RBP0.6□□□□□ -2.31
GABRB3-223ENST00000637293 CELSR1Q9NYQ6 3014 aa0.59□□□□□ -2.31
GABRB3-223ENST00000637293 HIVEP3Q5T1R4 2406 aa0.59□□□□□ -2.31
GABRB3-223ENST00000637293 PKD1L1Q8TDX9 2849 aa0.59□□□□□ -2.31
GABRB3-223ENST00000637293 H3BNG1 76 aa0.59□□□□□ -2.31
GABRB3-223ENST00000637293 UBR5O95071 2799 aaPredicted RBP0.59□□□□□ -2.32
GABRB3-223ENST00000637293 ANK2Q01484 3957 aa0.58□□□□□ -2.32
GABRB3-223ENST00000637293 PRM1P04553 51 aa0.58□□□□□ -2.32
GABRB3-223ENST00000637293 SETXQ7Z333 2677 aaKnown RBP0.58□□□□□ -2.32
GABRB3-223ENST00000637293 NBASA2RRP1 2371 aa0.57□□□□□ -2.32
GABRB3-223ENST00000637293 NAV2Q8IVL1 2488 aa0.57□□□□□ -2.32
GABRB3-223ENST00000637293 NOTCH1P46531 2555 aa0.57□□□□□ -2.32
GABRB3-223ENST00000637293 NF1P21359 2839 aa0.57□□□□□ -2.32
GABRB3-223ENST00000637293 COL6A5A8TX70 2615 aa0.56□□□□□ -2.32
GABRB3-223ENST00000637293 SETD2Q9BYW2 2564 aaPredicted RBP0.56□□□□□ -2.32
GABRB3-223ENST00000637293 TNXBP22105 4242 aa0.55□□□□□ -2.32
GABRB3-223ENST00000637293 TENM1Q9UKZ4 2725 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms