RNA–Protein interactions for RNA: ENST00000635914.1

UBE3A-224, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 9,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-224ENST00000635914 GIG44P09565 113 aaPredicted RBP8.78□□□□□ -1
UBE3A-224ENST00000635914 OCR1Q9BZK8 76 aa8.78□□□□□ -1
UBE3A-224ENST00000635914 ZCCHC13Q8WW36 166 aaKnown RBP8.76□□□□□ -1.01
UBE3A-224ENST00000635914 UTP20O75691 2785 aaKnown RBP8.75□□□□□ -1.01
UBE3A-224ENST00000635914 A0A1W2PNM2 257 aa8.74□□□□□ -1.01
UBE3A-224ENST00000635914 A0A0G2JQZ4 141 aa8.7□□□□□ -1.02
UBE3A-224ENST00000635914 CASC10Q5T4H9 136 aa8.7□□□□□ -1.02
UBE3A-224ENST00000635914 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.69□□□□□ -1.02
UBE3A-224ENST00000635914 SPINK7P58062 85 aa8.68□□□□□ -1.02
UBE3A-224ENST00000635914 PLAC4Q8WY50 150 aa8.68□□□□□ -1.02
UBE3A-224ENST00000635914 EIF4EBP3O60516 100 aaPredicted RBP8.63□□□□□ -1.03
UBE3A-224ENST00000635914 A0A096LNT2 108 aa8.62□□□□□ -1.03
UBE3A-224ENST00000635914 WIPF1O43516 503 aa8.62□□□□□ -1.03
UBE3A-224ENST00000635914 PLAC8Q9NZF1 115 aa8.61□□□□□ -1.03
UBE3A-224ENST00000635914 PCNTO95613 3336 aa8.61□□□□□ -1.03
UBE3A-224ENST00000635914 ROMO1P60602 79 aa8.61□□□□□ -1.03
UBE3A-224ENST00000635914 LINC01558Q9Y6Z2 57 aa8.61□□□□□ -1.03
UBE3A-224ENST00000635914 NBEAL2Q6ZNJ1 2754 aa8.61□□□□□ -1.03
UBE3A-224ENST00000635914 C5orf42Q9H799 3197 aa8.59□□□□□ -1.03
UBE3A-224ENST00000635914 KRTAP10-3P60369 221 aa8.57□□□□□ -1.04
UBE3A-224ENST00000635914 RPL37P61927 97 aaKnown RBP8.57□□□□□ -1.04
UBE3A-224ENST00000635914 H1FX-AS1Q4G0G2 97 aa8.56□□□□□ -1.04
UBE3A-224ENST00000635914 Q8N9P0 234 aaPredicted RBP8.56□□□□□ -1.04
UBE3A-224ENST00000635914 A0A0C4DFX4 3053 aa8.56□□□□□ -1.04
UBE3A-224ENST00000635914 GOLGB1Q14789 3259 aaKnown RBP8.55□□□□□ -1.04
UBE3A-224ENST00000635914 CFAP54Q96N23 3096 aa8.55□□□□□ -1.04
UBE3A-224ENST00000635914 ASB16-AS1Q495Z4 193 aa8.54□□□□□ -1.04
UBE3A-224ENST00000635914 Q5W150 140 aa8.53□□□□□ -1.04
UBE3A-224ENST00000635914 FP248Q71RG6 208 aaPredicted RBP8.53□□□□□ -1.04
UBE3A-224ENST00000635914 H3BS24 57 aa8.53□□□□□ -1.04
UBE3A-224ENST00000635914 MMP24-AS1A0A0U1RRL7 71 aa8.51□□□□□ -1.05
UBE3A-224ENST00000635914 M0QZ58 72 aa8.51□□□□□ -1.05
UBE3A-224ENST00000635914 OXTP01178 125 aa8.51□□□□□ -1.05
UBE3A-224ENST00000635914 UBR5O95071 2799 aaPredicted RBP8.49□□□□□ -1.05
UBE3A-224ENST00000635914 ITPR1Q14643 2758 aa8.49□□□□□ -1.05
UBE3A-224ENST00000635914 LAMA2P24043 3122 aaKnown RBP8.48□□□□□ -1.05
UBE3A-224ENST00000635914 Q5VSD8 79 aa8.47□□□□□ -1.05
UBE3A-224ENST00000635914 TRANK1O15050 2925 aa8.47□□□□□ -1.05
UBE3A-224ENST00000635914 LINC00472Q9H8W2 130 aa8.42□□□□□ -1.06
UBE3A-224ENST00000635914 Q5VV11 94 aa8.42□□□□□ -1.06
UBE3A-224ENST00000635914 SPRR1AP35321 89 aa8.41□□□□□ -1.06
UBE3A-224ENST00000635914 SPRR1BP22528 89 aa8.4□□□□□ -1.07
UBE3A-224ENST00000635914 DSPP15924 2871 aaKnown RBP8.39□□□□□ -1.07
UBE3A-224ENST00000635914 FLNCQ14315 2725 aa8.38□□□□□ -1.07
UBE3A-224ENST00000635914 UTRNP46939 3433 aa8.38□□□□□ -1.07
UBE3A-224ENST00000635914 MGAQ8IWI9 3026 aa8.38□□□□□ -1.07
UBE3A-224ENST00000635914 KRTAP1-3Q8IUG1 177 aa8.37□□□□□ -1.07
UBE3A-224ENST00000635914 ADM2Q7Z4H4 148 aa8.35□□□□□ -1.07
UBE3A-224ENST00000635914 PANO1I0J062 215 aa8.35□□□□□ -1.07
UBE3A-224ENST00000635914 TENM1Q9UKZ4 2725 aa8.33□□□□□ -1.08
UBE3A-224ENST00000635914 KRTAP1-1Q07627 177 aa8.32□□□□□ -1.08
UBE3A-224ENST00000635914 Q6ZR54 194 aa8.31□□□□□ -1.08
UBE3A-224ENST00000635914 PRAC1Q96KF2 57 aa8.31□□□□□ -1.08
UBE3A-224ENST00000635914 FRYLO94915 3013 aa8.3□□□□□ -1.08
UBE3A-224ENST00000635914 KRTAP16-1A8MUX0 517 aa8.28□□□□□ -1.08
UBE3A-224ENST00000635914 Q5XG85 94 aa8.27□□□□□ -1.09
UBE3A-224ENST00000635914 RPS29P62273 56 aaKnown RBP8.26□□□□□ -1.09
UBE3A-224ENST00000635914 LCE6AA0A183 80 aa8.26□□□□□ -1.09
UBE3A-224ENST00000635914 LRBAP50851 2863 aa8.25□□□□□ -1.09
UBE3A-224ENST00000635914 NF1P21359 2839 aa8.24□□□□□ -1.09
UBE3A-224ENST00000635914 CHD9Q3L8U1 2897 aa8.24□□□□□ -1.09
UBE3A-224ENST00000635914 HIVEP1P15822 2718 aa8.24□□□□□ -1.09
UBE3A-224ENST00000635914 KRTAP26-1Q6PEX3 210 aa8.2□□□□□ -1.1
UBE3A-224ENST00000635914 TENM3Q9P273 2699 aa8.2□□□□□ -1.1
UBE3A-224ENST00000635914 FRYQ5TBA9 3013 aa8.19□□□□□ -1.1
UBE3A-224ENST00000635914 KALRNO60229 2985 aa8.19□□□□□ -1.1
UBE3A-224ENST00000635914 C20orf166-AS1Q96NR2 134 aa8.17□□□□□ -1.1
UBE3A-224ENST00000635914 Q8NDZ9 215 aa8.17□□□□□ -1.1
UBE3A-224ENST00000635914 CHD7Q9P2D1 2997 aa8.17□□□□□ -1.1
UBE3A-224ENST00000635914 VPS13AQ96RL7 3174 aa8.14□□□□□ -1.11
UBE3A-224ENST00000635914 CRYBG3Q68DQ2 2970 aa8.12□□□□□ -1.11
UBE3A-224ENST00000635914 TRIOO75962 3097 aa8.12□□□□□ -1.11
UBE3A-224ENST00000635914 A8MUU9 505 aa8.11□□□□□ -1.11
UBE3A-224ENST00000635914 SPATA8Q6RVD6 105 aa8.1□□□□□ -1.11
UBE3A-224ENST00000635914 WDFY4Q6ZS81 3184 aa8.1□□□□□ -1.11
UBE3A-224ENST00000635914 KRTAP10-1P60331 282 aa8.09□□□□□ -1.11
UBE3A-224ENST00000635914 NIPBLQ6KC79 2804 aaeCLIP8.05□□□□□ -1.128e-8■■■■■ 41.9
UBE3A-224ENST00000635914 ASH1LQ9NR48 2969 aaKnown RBP8.04□□□□□ -1.12
UBE3A-224ENST00000635914 KRTAP1-5Q9BYS1 174 aa8.03□□□□□ -1.12
UBE3A-224ENST00000635914 KRTAP25-1Q3LHN0 102 aa8.03□□□□□ -1.12
UBE3A-224ENST00000635914 TNP1P09430 55 aa8.02□□□□□ -1.12
UBE3A-224ENST00000635914 PRUNE2Q8WUY3 3088 aa8.02□□□□□ -1.13
UBE3A-224ENST00000635914 KRTAP10-2P60368 255 aa8.02□□□□□ -1.13
UBE3A-224ENST00000635914 TNRC18O15417 2968 aaPredicted RBP8□□□□□ -1.13
UBE3A-224ENST00000635914 CELSR2Q9HCU4 2923 aa7.99□□□□□ -1.13
UBE3A-224ENST00000635914 XIRP2A4UGR9 3374 aa7.99□□□□□ -1.13
UBE3A-224ENST00000635914 CYSTM1Q9H1C7 97 aa7.99□□□□□ -1.13
UBE3A-224ENST00000635914 PP632Q6XCG6 107 aa7.98□□□□□ -1.13
UBE3A-224ENST00000635914 KRTAP4-16G5E9R7 235 aaPredicted RBP7.96□□□□□ -1.13
UBE3A-224ENST00000635914 KRTAP29-1A8MX34 341 aaPredicted RBP7.93□□□□□ -1.14
UBE3A-224ENST00000635914 A0A087X002 238 aa7.92□□□□□ -1.14
UBE3A-224ENST00000635914 TACC2O95359 2948 aa7.9□□□□□ -1.15
UBE3A-224ENST00000635914 COL12A1Q99715 3063 aa7.88□□□□□ -1.15
UBE3A-224ENST00000635914 ZZEF1O43149 2961 aa7.86□□□□□ -1.15
UBE3A-224ENST00000635914 C10orf95Q9H7T3 257 aa7.86□□□□□ -1.15
UBE3A-224ENST00000635914 TGP01266 2768 aa7.86□□□□□ -1.15
UBE3A-224ENST00000635914 USP34Q70CQ2 3546 aa7.85□□□□□ -1.15
UBE3A-224ENST00000635914 REV3LO60673 3130 aa7.84□□□□□ -1.15
UBE3A-224ENST00000635914 PDZD2O15018 2839 aa7.84□□□□□ -1.16
UBE3A-224ENST00000635914 NDUFAF8A1L188 74 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms