RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 FLNAP21333 2647 aaKnown RBP7.23□□□□□ -1.25
SRSF4-208ENST00000634348 S4R3F8 94 aa7.22□□□□□ -1.25
SRSF4-208ENST00000634348 COL4A2P08572 1712 aa7.22□□□□□ -1.25
SRSF4-208ENST00000634348 TRIOO75962 3097 aa7.21□□□□□ -1.25
SRSF4-208ENST00000634348 CYSTM1Q9H1C7 97 aa7.21□□□□□ -1.25
SRSF4-208ENST00000634348 XIRP2A4UGR9 3374 aa7.21□□□□□ -1.26
SRSF4-208ENST00000634348 SPRR4Q96PI1 79 aa7.2□□□□□ -1.26
SRSF4-208ENST00000634348 MAP1AP78559 2803 aaPredicted RBP7.19□□□□□ -1.26
SRSF4-208ENST00000634348 NBEAL1Q6ZS30 2694 aa7.19□□□□□ -1.26
SRSF4-208ENST00000634348 TEX15Q9BXT5 2789 aa7.19□□□□□ -1.26
SRSF4-208ENST00000634348 R4GN34 69 aa7.19□□□□□ -1.26
SRSF4-208ENST00000634348 A0A087WTM6 91 aa7.19□□□□□ -1.26
SRSF4-208ENST00000634348 PRR34Q9NV39 138 aa7.18□□□□□ -1.26
SRSF4-208ENST00000634348 CNBPP62633 177 aaKnown RBP7.17□□□□□ -1.26
SRSF4-208ENST00000634348 Q6ZSA8 131 aa7.17□□□□□ -1.26
SRSF4-208ENST00000634348 KRTAP25-1Q3LHN0 102 aa7.16□□□□□ -1.26
SRSF4-208ENST00000634348 MKI67P46013 3256 aaKnown RBP7.16□□□□□ -1.26
SRSF4-208ENST00000634348 SETXQ7Z333 2677 aaKnown RBP7.15□□□□□ -1.26
SRSF4-208ENST00000634348 KRTAP10-3P60369 221 aa7.15□□□□□ -1.26
SRSF4-208ENST00000634348 GIG44P09565 113 aaPredicted RBP7.14□□□□□ -1.27
SRSF4-208ENST00000634348 BAHCC1Q9P281 2608 aa7.14□□□□□ -1.27
SRSF4-208ENST00000634348 CELSR3Q9NYQ7 3312 aa7.14□□□□□ -1.27
SRSF4-208ENST00000634348 OXTP01178 125 aa7.14□□□□□ -1.27
SRSF4-208ENST00000634348 NOTCH1P46531 2555 aa7.14□□□□□ -1.27
SRSF4-208ENST00000634348 C20orf166-AS1Q96NR2 134 aa7.13□□□□□ -1.27
SRSF4-208ENST00000634348 TEP1Q99973 2627 aaKnown RBP7.12□□□□□ -1.27
SRSF4-208ENST00000634348 BRCA2P51587 3418 aa7.11□□□□□ -1.27
SRSF4-208ENST00000634348 STAB2Q8WWQ8 2551 aa7.11□□□□□ -1.27
SRSF4-208ENST00000634348 HELZ2Q9BYK8 2649 aaKnown RBP7.11□□□□□ -1.27
SRSF4-208ENST00000634348 PRUNE2Q8WUY3 3088 aa7.1□□□□□ -1.27
SRSF4-208ENST00000634348 DMBT1Q9UGM3 2413 aaPredicted RBP7.09□□□□□ -1.27
SRSF4-208ENST00000634348 M0R2T5 61 aa7.08□□□□□ -1.28
SRSF4-208ENST00000634348 WDFY4Q6ZS81 3184 aa7.08□□□□□ -1.28
SRSF4-208ENST00000634348 ZCCHC13Q8WW36 166 aaKnown RBP7.08□□□□□ -1.28
SRSF4-208ENST00000634348 VPS13AQ96RL7 3174 aa7.08□□□□□ -1.28
SRSF4-208ENST00000634348 LAMA3Q16787 3333 aa7.08□□□□□ -1.28
SRSF4-208ENST00000634348 MGAQ8IWI9 3026 aa7.07□□□□□ -1.28
SRSF4-208ENST00000634348 MMP24-AS1A0A0U1RRL7 71 aa7.07□□□□□ -1.28
SRSF4-208ENST00000634348 A6NN06 94 aa7.07□□□□□ -1.28
SRSF4-208ENST00000634348 LINC00612Q8N6U2 182 aa7.05□□□□□ -1.28
SRSF4-208ENST00000634348 Q5W150 140 aa7.05□□□□□ -1.28
SRSF4-208ENST00000634348 UNC79Q9P2D8 2635 aa7.05□□□□□ -1.28
SRSF4-208ENST00000634348 RANBP2P49792 3224 aaKnown RBP7.04□□□□□ -1.28
SRSF4-208ENST00000634348 COL6A5A8TX70 2615 aa7.04□□□□□ -1.28
SRSF4-208ENST00000634348 SPATA8Q6RVD6 105 aa7.02□□□□□ -1.29
SRSF4-208ENST00000634348 UNC80Q8N2C7 3258 aa7.02□□□□□ -1.29
SRSF4-208ENST00000634348 FRYQ5TBA9 3013 aa7□□□□□ -1.29
SRSF4-208ENST00000634348 M0QZ58 72 aa7□□□□□ -1.29
SRSF4-208ENST00000634348 Q8NDZ9 215 aa7□□□□□ -1.29
SRSF4-208ENST00000634348 CHD7Q9P2D1 2997 aa7□□□□□ -1.29
SRSF4-208ENST00000634348 KLK9Q2XQG4 91 aa6.99□□□□□ -1.29
SRSF4-208ENST00000634348 GCN1Q92616 2671 aaKnown RBP6.98□□□□□ -1.29
SRSF4-208ENST00000634348 NBEAL2Q6ZNJ1 2754 aa6.95□□□□□ -1.3
SRSF4-208ENST00000634348 REV3LO60673 3130 aa6.95□□□□□ -1.3
SRSF4-208ENST00000634348 DMXL2Q8TDJ6 3036 aa6.94□□□□□ -1.3
SRSF4-208ENST00000634348 TRANK1O15050 2925 aa6.93□□□□□ -1.3
SRSF4-208ENST00000634348 A0A096LNT2 108 aa6.92□□□□□ -1.3
SRSF4-208ENST00000634348 Q6ZR54 194 aa6.91□□□□□ -1.3
SRSF4-208ENST00000634348 ADM2Q7Z4H4 148 aa6.9□□□□□ -1.31
SRSF4-208ENST00000634348 LINC00472Q9H8W2 130 aa6.88□□□□□ -1.31
SRSF4-208ENST00000634348 CDH23Q9H251 3354 aa6.87□□□□□ -1.31
SRSF4-208ENST00000634348 HTTP42858 3142 aa6.86□□□□□ -1.31
SRSF4-208ENST00000634348 ASH1LQ9NR48 2969 aaKnown RBP6.86□□□□□ -1.31
SRSF4-208ENST00000634348 C10orf95Q9H7T3 257 aa6.85□□□□□ -1.31
SRSF4-208ENST00000634348 PANO1I0J062 215 aa6.83□□□□□ -1.32
SRSF4-208ENST00000634348 KALRNO60229 2985 aa6.83□□□□□ -1.32
SRSF4-208ENST00000634348 A0A087X002 238 aa6.82□□□□□ -1.32
SRSF4-208ENST00000634348 KRTAP1-3Q8IUG1 177 aa6.82□□□□□ -1.32
SRSF4-208ENST00000634348 DSPP15924 2871 aaKnown RBP6.82□□□□□ -1.32
SRSF4-208ENST00000634348 NSD1Q96L73 2696 aaPredicted RBP6.81□□□□□ -1.32
SRSF4-208ENST00000634348 KMT2BQ9UMN6 2715 aaPredicted RBP6.81□□□□□ -1.32
SRSF4-208ENST00000634348 ZNF292O60281 2723 aa6.8□□□□□ -1.32
SRSF4-208ENST00000634348 CFAP47Q6ZTR5 3102 aa6.8□□□□□ -1.32
SRSF4-208ENST00000634348 A8MUU9 505 aa6.79□□□□□ -1.32
SRSF4-208ENST00000634348 KRTAP1-1Q07627 177 aa6.78□□□□□ -1.32
SRSF4-208ENST00000634348 DNAH14Q0VDD8 3507 aa6.78□□□□□ -1.32
SRSF4-208ENST00000634348 CRYBG3Q68DQ2 2970 aa6.77□□□□□ -1.33
SRSF4-208ENST00000634348 VCANP13611 3396 aa6.76□□□□□ -1.33
SRSF4-208ENST00000634348 KRTAP26-1Q6PEX3 210 aa6.75□□□□□ -1.33
SRSF4-208ENST00000634348 A8MU10 97 aa6.75□□□□□ -1.33
SRSF4-208ENST00000634348 UBR5O95071 2799 aaPredicted RBP6.75□□□□□ -1.33
SRSF4-208ENST00000634348 LAMA1P25391 3075 aa6.74□□□□□ -1.33
SRSF4-208ENST00000634348 PP632Q6XCG6 107 aa6.72□□□□□ -1.33
SRSF4-208ENST00000634348 SPRR1AP35321 89 aa6.72□□□□□ -1.33
SRSF4-208ENST00000634348 TACC2O95359 2948 aa6.71□□□□□ -1.33
SRSF4-208ENST00000634348 SPRR1BP22528 89 aa6.69□□□□□ -1.34
SRSF4-208ENST00000634348 BOD1L1Q8NFC6 3051 aa6.69□□□□□ -1.34
SRSF4-208ENST00000634348 KRTAP11-1Q8IUC1 163 aa6.69□□□□□ -1.34
SRSF4-208ENST00000634348 COL6A3P12111 3177 aa6.69□□□□□ -1.34
SRSF4-208ENST00000634348 COL12A1Q99715 3063 aa6.68□□□□□ -1.34
SRSF4-208ENST00000634348 UTP20O75691 2785 aaKnown RBP6.67□□□□□ -1.34
SRSF4-208ENST00000634348 PLAC8Q9NZF1 115 aa6.66□□□□□ -1.34
SRSF4-208ENST00000634348 SPEGQ15772 3267 aa6.66□□□□□ -1.34
SRSF4-208ENST00000634348 KRTAP1-5Q9BYS1 174 aa6.66□□□□□ -1.34
SRSF4-208ENST00000634348 APCP25054 2843 aa6.66□□□□□ -1.34
SRSF4-208ENST00000634348 TNP1P09430 55 aa6.65□□□□□ -1.34
SRSF4-208ENST00000634348 SZT2Q5T011 3432 aa6.64□□□□□ -1.35
SRSF4-208ENST00000634348 IGSF10Q6WRI0 2623 aa6.64□□□□□ -1.35
SRSF4-208ENST00000634348 Q5VSD8 79 aa6.63□□□□□ -1.35
SRSF4-208ENST00000634348 KRTAP4-16G5E9R7 235 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms