RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 KRTAP10-2P60368 255 aa7.35□□□□□ -1.23
SLC6A6-210ENST00000622186 SZT2Q5T011 3432 aa7.33□□□□□ -1.24
SLC6A6-210ENST00000622186 OCR1Q9BZK8 76 aa7.32□□□□□ -1.24
SLC6A6-210ENST00000622186 LINC01558Q9Y6Z2 57 aa7.32□□□□□ -1.24
SLC6A6-210ENST00000622186 ANKRD17O75179 2603 aaKnown RBP7.3□□□□□ -1.24
SLC6A6-210ENST00000622186 XIRP2A4UGR9 3374 aa7.3□□□□□ -1.24
SLC6A6-210ENST00000622186 H3BS24 57 aa7.26□□□□□ -1.25
SLC6A6-210ENST00000622186 USP9YO00507 2555 aaPredicted RBP7.26□□□□□ -1.25
SLC6A6-210ENST00000622186 CR1P17927 2039 aa7.25□□□□□ -1.25
SLC6A6-210ENST00000622186 UNC80Q8N2C7 3258 aa7.25□□□□□ -1.25
SLC6A6-210ENST00000622186 SPTBN4Q9H254 2564 aa7.25□□□□□ -1.25
SLC6A6-210ENST00000622186 SPATA8Q6RVD6 105 aa7.25□□□□□ -1.25
SLC6A6-210ENST00000622186 P0C880 135 aa7.24□□□□□ -1.25
SLC6A6-210ENST00000622186 SPTBN5Q9NRC6 3674 aaKnown RBP7.23□□□□□ -1.25
SLC6A6-210ENST00000622186 FLG2Q5D862 2391 aaPredicted RBP7.22□□□□□ -1.25
SLC6A6-210ENST00000622186 Q8NDZ9 215 aa7.22□□□□□ -1.25
SLC6A6-210ENST00000622186 MYO15AQ9UKN7 3530 aa7.22□□□□□ -1.25
SLC6A6-210ENST00000622186 ANKRD11Q6UB99 2663 aaPredicted RBP7.21□□□□□ -1.25
SLC6A6-210ENST00000622186 A0A1B0GVY2 172 aa7.21□□□□□ -1.26
SLC6A6-210ENST00000622186 MGAM2Q2M2H8 2515 aa7.2□□□□□ -1.26
SLC6A6-210ENST00000622186 SPRR1BP22528 89 aa7.19□□□□□ -1.26
SLC6A6-210ENST00000622186 A8MUU9 505 aa7.17□□□□□ -1.26
SLC6A6-210ENST00000622186 EYSQ5T1H1 3165 aa7.16□□□□□ -1.26
SLC6A6-210ENST00000622186 PANO1I0J062 215 aa7.16□□□□□ -1.26
SLC6A6-210ENST00000622186 Q6ZR54 194 aa7.16□□□□□ -1.26
SLC6A6-210ENST00000622186 VCANP13611 3396 aa7.16□□□□□ -1.26
SLC6A6-210ENST00000622186 LINC00472Q9H8W2 130 aa7.16□□□□□ -1.26
SLC6A6-210ENST00000622186 RANBP2P49792 3224 aaKnown RBP7.14□□□□□ -1.27
SLC6A6-210ENST00000622186 KRTAP1-5Q9BYS1 174 aa7.13□□□□□ -1.27
SLC6A6-210ENST00000622186 USP24Q9UPU5 2620 aa7.12□□□□□ -1.27
SLC6A6-210ENST00000622186 SPEGQ15772 3267 aa7.12□□□□□ -1.27
SLC6A6-210ENST00000622186 SPRR1AP35321 89 aa7.12□□□□□ -1.27
SLC6A6-210ENST00000622186 CHD7Q9P2D1 2997 aa7.11□□□□□ -1.27
SLC6A6-210ENST00000622186 KRTAP10-8P60410 259 aa7.11□□□□□ -1.27
SLC6A6-210ENST00000622186 KRTAP26-1Q6PEX3 210 aa7.1□□□□□ -1.27
SLC6A6-210ENST00000622186 CEP295Q9C0D2 2601 aa7.09□□□□□ -1.27
SLC6A6-210ENST00000622186 Q5VV11 94 aa7.08□□□□□ -1.28
SLC6A6-210ENST00000622186 A0A0C4DFX4 3053 aa7.06□□□□□ -1.28
SLC6A6-210ENST00000622186 TNP1P09430 55 aa7.06□□□□□ -1.28
SLC6A6-210ENST00000622186 REV3LO60673 3130 aa7.05□□□□□ -1.28
SLC6A6-210ENST00000622186 C10orf95Q9H7T3 257 aa7.05□□□□□ -1.28
SLC6A6-210ENST00000622186 KRTAP16-1A8MUX0 517 aa7.03□□□□□ -1.28
SLC6A6-210ENST00000622186 PRUNE2Q8WUY3 3088 aa7.02□□□□□ -1.29
SLC6A6-210ENST00000622186 A0A087X002 238 aa7.02□□□□□ -1.29
SLC6A6-210ENST00000622186 HECTD1Q9ULT8 2610 aa7.02□□□□□ -1.29
SLC6A6-210ENST00000622186 FLNBO75369 2602 aaKnown RBP7.01□□□□□ -1.29
SLC6A6-210ENST00000622186 WDFY3Q8IZQ1 3526 aa6.97□□□□□ -1.29
SLC6A6-210ENST00000622186 EPG5Q9HCE0 2579 aa6.97□□□□□ -1.29
SLC6A6-210ENST00000622186 LAMA1P25391 3075 aa6.96□□□□□ -1.29
SLC6A6-210ENST00000622186 KRTAP10-10P60014 251 aa6.96□□□□□ -1.3
SLC6A6-210ENST00000622186 CELSR3Q9NYQ7 3312 aa6.94□□□□□ -1.3
SLC6A6-210ENST00000622186 A8MU10 97 aa6.93□□□□□ -1.3
SLC6A6-210ENST00000622186 ATRQ13535 2644 aa6.91□□□□□ -1.3
SLC6A6-210ENST00000622186 CHD9Q3L8U1 2897 aa6.9□□□□□ -1.31
SLC6A6-210ENST00000622186 WDR87Q6ZQQ6 2873 aa6.88□□□□□ -1.31
SLC6A6-210ENST00000622186 STAB1Q9NY15 2570 aa6.88□□□□□ -1.31
SLC6A6-210ENST00000622186 RPS29P62273 56 aaKnown RBP6.88□□□□□ -1.31
SLC6A6-210ENST00000622186 FREM2Q5SZK8 3169 aa6.87□□□□□ -1.31
SLC6A6-210ENST00000622186 MAST4O15021 2626 aa6.86□□□□□ -1.31
SLC6A6-210ENST00000622186 Q5XG85 94 aa6.85□□□□□ -1.31
SLC6A6-210ENST00000622186 KRTAP25-1Q3LHN0 102 aa6.82□□□□□ -1.32
SLC6A6-210ENST00000622186 TRIOO75962 3097 aa6.82□□□□□ -1.32
SLC6A6-210ENST00000622186 DMDP11532 3685 aa6.82□□□□□ -1.32
SLC6A6-210ENST00000622186 TRANK1O15050 2925 aa6.81□□□□□ -1.32
SLC6A6-210ENST00000622186 NOTCH2NLQ7Z3S9 236 aa6.81□□□□□ -1.32
SLC6A6-210ENST00000622186 PRO2289Q9P1D8 64 aa6.8□□□□□ -1.32
SLC6A6-210ENST00000622186 NDUFAF8A1L188 74 aa6.79□□□□□ -1.32
SLC6A6-210ENST00000622186 ASB16-AS1Q495Z4 193 aa6.79□□□□□ -1.32
SLC6A6-210ENST00000622186 DMBT1Q9UGM3 2413 aaPredicted RBP6.77□□□□□ -1.33
SLC6A6-210ENST00000622186 CYSTM1Q9H1C7 97 aa6.76□□□□□ -1.33
SLC6A6-210ENST00000622186 WDFY4Q6ZS81 3184 aa6.76□□□□□ -1.33
SLC6A6-210ENST00000622186 COL6A3P12111 3177 aa6.75□□□□□ -1.33
SLC6A6-210ENST00000622186 VPS13AQ96RL7 3174 aa6.75□□□□□ -1.33
SLC6A6-210ENST00000622186 CFAP54Q96N23 3096 aa6.72□□□□□ -1.33
SLC6A6-210ENST00000622186 KRTAP21-3Q3LHN1 58 aa6.7□□□□□ -1.34
SLC6A6-210ENST00000622186 KRTAP29-1A8MX34 341 aaPredicted RBP6.7□□□□□ -1.34
SLC6A6-210ENST00000622186 KRTAP13-2Q52LG2 175 aa6.69□□□□□ -1.34
SLC6A6-210ENST00000622186 Q6ZRN7 208 aaPredicted RBP6.68□□□□□ -1.34
SLC6A6-210ENST00000622186 KRTAP4-16G5E9R7 235 aaPredicted RBP6.67□□□□□ -1.34
SLC6A6-210ENST00000622186 FRYLO94915 3013 aa6.67□□□□□ -1.34
SLC6A6-210ENST00000622186 STAB2Q8WWQ8 2551 aa6.65□□□□□ -1.35
SLC6A6-210ENST00000622186 PP632Q6XCG6 107 aa6.64□□□□□ -1.35
SLC6A6-210ENST00000622186 CFAP46Q8IYW2 2715 aa6.64□□□□□ -1.35
SLC6A6-210ENST00000622186 ASPMQ8IZT6 3477 aa6.63□□□□□ -1.35
SLC6A6-210ENST00000622186 KRTAP11-1Q8IUC1 163 aa6.63□□□□□ -1.35
SLC6A6-210ENST00000622186 ITPR3Q14573 2671 aa6.62□□□□□ -1.35
SLC6A6-210ENST00000622186 FLNAP21333 2647 aaKnown RBP6.62□□□□□ -1.35
SLC6A6-210ENST00000622186 HELZ2Q9BYK8 2649 aaKnown RBP6.62□□□□□ -1.35
SLC6A6-210ENST00000622186 ZFHX4Q86UP3 3567 aa6.59□□□□□ -1.35
SLC6A6-210ENST00000622186 NBEAL1Q6ZS30 2694 aa6.56□□□□□ -1.36
SLC6A6-210ENST00000622186 DCHS1Q96JQ0 3298 aa6.53□□□□□ -1.36
SLC6A6-210ENST00000622186 XP32Q5T750 250 aa6.53□□□□□ -1.36
SLC6A6-210ENST00000622186 SETXQ7Z333 2677 aaKnown RBP6.53□□□□□ -1.36
SLC6A6-210ENST00000622186 TNRC18O15417 2968 aaPredicted RBP6.49□□□□□ -1.37
SLC6A6-210ENST00000622186 FRYQ5TBA9 3013 aa6.49□□□□□ -1.37
SLC6A6-210ENST00000622186 MUC3AQ02505 3323 aa6.48□□□□□ -1.37
SLC6A6-210ENST00000622186 A6NN06 94 aa6.47□□□□□ -1.37
SLC6A6-210ENST00000622186 SPENQ96T58 3664 aaKnown RBP6.47□□□□□ -1.37
SLC6A6-210ENST00000622186 CRCT1Q9UGL9 99 aa6.46□□□□□ -1.37
SLC6A6-210ENST00000622186 SMG1Q96Q15 3661 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms