RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 COX6CP09669 75 aa7.96□□□□□ -1.14
NEK3-210ENST00000620675 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.96□□□□□ -1.14
NEK3-210ENST00000620675 A0A0G2JQZ4 141 aa7.94□□□□□ -1.14
NEK3-210ENST00000620675 TCL1BO95988 128 aa7.93□□□□□ -1.14
NEK3-210ENST00000620675 C9orf118A6NHY6 69 aa7.93□□□□□ -1.14
NEK3-210ENST00000620675 LST1O00453 97 aa7.93□□□□□ -1.14
NEK3-210ENST00000620675 C9orf153Q5TBE3 101 aa7.93□□□□□ -1.14
NEK3-210ENST00000620675 Q8NBF4 154 aa7.93□□□□□ -1.14
NEK3-210ENST00000620675 A0A1B0GX51 115 aa7.91□□□□□ -1.14
NEK3-210ENST00000620675 LAMTOR3Q9UHA4 124 aa7.91□□□□□ -1.14
NEK3-210ENST00000620675 COL5A1-AS1Q5SY13 56 aa7.9□□□□□ -1.15
NEK3-210ENST00000620675 LINC00304Q8N9R0 145 aa7.89□□□□□ -1.15
NEK3-210ENST00000620675 A0A1W2PPM0 123 aa7.88□□□□□ -1.15
NEK3-210ENST00000620675 DNAL4O96015 105 aa7.88□□□□□ -1.15
NEK3-210ENST00000620675 SNCGO76070 127 aa7.88□□□□□ -1.15
NEK3-210ENST00000620675 TRACP01848 142 aa7.88□□□□□ -1.15
NEK3-210ENST00000620675 FABP2P12104 132 aa7.87□□□□□ -1.15
NEK3-210ENST00000620675 SSBP3-AS1Q7Z2R9 100 aa7.87□□□□□ -1.15
NEK3-210ENST00000620675 ORMDL1Q9P0S3 153 aa7.87□□□□□ -1.15
NEK3-210ENST00000620675 HMCN2Q8NDA2 5059 aa7.86□□□□□ -1.15
NEK3-210ENST00000620675 A0A1B0GV72 72 aa7.86□□□□□ -1.15
NEK3-210ENST00000620675 ATXN8Q156A1 80 aa7.85□□□□□ -1.15
NEK3-210ENST00000620675 OCIAD2Q56VL3 154 aa7.85□□□□□ -1.15
NEK3-210ENST00000620675 HRCT1Q6UXD1 115 aa7.85□□□□□ -1.15
NEK3-210ENST00000620675 NDUFV3P56181 108 aaKnown RBP7.84□□□□□ -1.15
NEK3-210ENST00000620675 PPDPFLQ8WWR9 84 aa7.84□□□□□ -1.15
NEK3-210ENST00000620675 MTURNQ8N3F0 131 aa7.83□□□□□ -1.16
NEK3-210ENST00000620675 F8WEM9 126 aa7.82□□□□□ -1.16
NEK3-210ENST00000620675 LPAP08519 4548 aa7.82□□□□□ -1.16
NEK3-210ENST00000620675 IGLV8-61A0A075B6I0 122 aa7.82□□□□□ -1.16
NEK3-210ENST00000620675 H3BMG7 143 aa7.82□□□□□ -1.16
NEK3-210ENST00000620675 BAALC-AS2P0C853 105 aa7.82□□□□□ -1.16
NEK3-210ENST00000620675 LYRM7Q5U5X0 104 aa7.82□□□□□ -1.16
NEK3-210ENST00000620675 IGFL1Q6UW32 110 aa7.82□□□□□ -1.16
NEK3-210ENST00000620675 TRBV20-1A0A075B6N2 111 aa7.81□□□□□ -1.16
NEK3-210ENST00000620675 RETNLBQ9BQ08 111 aa7.81□□□□□ -1.16
NEK3-210ENST00000620675 C9JAW5 83 aa7.8□□□□□ -1.16
NEK3-210ENST00000620675 SPCS1Q9Y6A9 102 aa7.8□□□□□ -1.16
NEK3-210ENST00000620675 TMEM256-PLSCR3K7ERE1 68 aa7.8□□□□□ -1.16
NEK3-210ENST00000620675 C4orf48Q5BLP8 95 aa7.8□□□□□ -1.16
NEK3-210ENST00000620675 SPAG11AQ6PDA7 123 aa7.78□□□□□ -1.16
NEK3-210ENST00000620675 SPINK1P00995 79 aa7.77□□□□□ -1.17
NEK3-210ENST00000620675 LRP2P98164 4655 aa7.77□□□□□ -1.17
NEK3-210ENST00000620675 UBE2V1Q13404 147 aa7.77□□□□□ -1.17
NEK3-210ENST00000620675 ANKRD29Q8N6D5 301 aa7.76□□□□□ -1.17
NEK3-210ENST00000620675 GHRHP01286 108 aa7.75□□□□□ -1.17
NEK3-210ENST00000620675 Q6JHZ5 121 aa7.75□□□□□ -1.17
NEK3-210ENST00000620675 K7EP34 96 aa7.74□□□□□ -1.17
NEK3-210ENST00000620675 H3BQ85 93 aa7.74□□□□□ -1.17
NEK3-210ENST00000620675 SMCPP49901 116 aaPredicted RBP7.73□□□□□ -1.17
NEK3-210ENST00000620675 A0A1W2PNM2 257 aa7.72□□□□□ -1.17
NEK3-210ENST00000620675 CD164Q04900 197 aa7.72□□□□□ -1.17
NEK3-210ENST00000620675 PRO0461Q9UI25 63 aa7.71□□□□□ -1.17
NEK3-210ENST00000620675 PRR4Q16378 134 aa7.71□□□□□ -1.18
NEK3-210ENST00000620675 TRBV7-7A0A0K0K1E9 115 aa7.7□□□□□ -1.18
NEK3-210ENST00000620675 RPS29P62273 56 aaKnown RBP7.7□□□□□ -1.18
NEK3-210ENST00000620675 TRBV7-4A0A0J9YYF1 115 aa7.69□□□□□ -1.18
NEK3-210ENST00000620675 RBM3P98179 157 aaKnown RBP7.69□□□□□ -1.18
NEK3-210ENST00000620675 H3BT86 120 aa7.69□□□□□ -1.18
NEK3-210ENST00000620675 TEN1Q86WV5 123 aa7.67□□□□□ -1.18
NEK3-210ENST00000620675 OBSCN-AS1Q96MR7 158 aa7.67□□□□□ -1.18
NEK3-210ENST00000620675 C14orf132Q9NPU4 83 aa7.67□□□□□ -1.18
NEK3-210ENST00000620675 CCKP06307 115 aa7.66□□□□□ -1.18
NEK3-210ENST00000620675 Q6Q795 121 aa7.66□□□□□ -1.18
NEK3-210ENST00000620675 VPS25Q9BRG1 176 aa7.66□□□□□ -1.18
NEK3-210ENST00000620675 LIMD2Q9BT23 127 aa7.66□□□□□ -1.18
NEK3-210ENST00000620675 A0A087WSZ3 146 aa7.65□□□□□ -1.18
NEK3-210ENST00000620675 A0A1B0GV90 55 aa7.65□□□□□ -1.18
NEK3-210ENST00000620675 Q5XG85 94 aa7.65□□□□□ -1.18
NEK3-210ENST00000620675 DSCR8Q96T75 97 aa7.65□□□□□ -1.18
NEK3-210ENST00000620675 C1orf195Q5TG92 126 aa7.64□□□□□ -1.19
NEK3-210ENST00000620675 GTF2H5Q6ZYL4 71 aa7.64□□□□□ -1.19
NEK3-210ENST00000620675 JMJD7-PLA2G4BH0Y9G9 81 aa7.64□□□□□ -1.19
NEK3-210ENST00000620675 UBR4Q5T4S7 5183 aa7.64□□□□□ -1.19
NEK3-210ENST00000620675 Q6ZQT0 140 aa7.63□□□□□ -1.19
NEK3-210ENST00000620675 IGLV7-46A0A075B6I9 117 aa7.62□□□□□ -1.19
NEK3-210ENST00000620675 LOC110117498A0A087WWA1 95 aa7.61□□□□□ -1.19
NEK3-210ENST00000620675 FP248Q71RG6 208 aaPredicted RBP7.58□□□□□ -1.2
NEK3-210ENST00000620675 Q96NJ1 140 aa7.58□□□□□ -1.2
NEK3-210ENST00000620675 ASB16-AS1Q495Z4 193 aa7.58□□□□□ -1.2
NEK3-210ENST00000620675 F8W1H4 67 aa7.56□□□□□ -1.2
NEK3-210ENST00000620675 DEFB116Q30KQ4 102 aa7.56□□□□□ -1.2
NEK3-210ENST00000620675 ETDBQ3ZM63 59 aa7.56□□□□□ -1.2
NEK3-210ENST00000620675 KRTAP13-3Q3SY46 172 aa7.55□□□□□ -1.2
NEK3-210ENST00000620675 LOC100996750A0A140TA64 210 aa7.55□□□□□ -1.2
NEK3-210ENST00000620675 KRTAP4-6Q9BYQ5 205 aa7.55□□□□□ -1.2
NEK3-210ENST00000620675 SS18L2Q9UHA2 77 aa7.55□□□□□ -1.2
NEK3-210ENST00000620675 PDE6GP18545 87 aa7.53□□□□□ -1.2
NEK3-210ENST00000620675 TPRXLQ17RH7 258 aa7.53□□□□□ -1.2
NEK3-210ENST00000620675 C9orf92A6NGG3 77 aa7.52□□□□□ -1.21
NEK3-210ENST00000620675 LINC00472Q9H8W2 130 aa7.51□□□□□ -1.21
NEK3-210ENST00000620675 RNF213Q63HN8 5207 aa7.5□□□□□ -1.21
NEK3-210ENST00000620675 CDIP1Q9H305 208 aa7.48□□□□□ -1.21
NEK3-210ENST00000620675 IGKV4-1P06312 121 aa7.47□□□□□ -1.21
NEK3-210ENST00000620675 SIGMAR1Q99720 223 aa7.47□□□□□ -1.21
NEK3-210ENST00000620675 MUC2Q02817 5179 aa7.46□□□□□ -1.22
NEK3-210ENST00000620675 MUC17Q685J3 4493 aa7.45□□□□□ -1.22
NEK3-210ENST00000620675 XP32Q5T750 250 aa7.45□□□□□ -1.22
NEK3-210ENST00000620675 A0A1B0GW54 56 aa7.44□□□□□ -1.22
NEK3-210ENST00000620675 NOTCH2NLQ7Z3S9 236 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms