RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 WWC2-AS2Q96NR7 200 aa8.39□□□□□ -1.07
PPP4R3B-206ENST00000616407 KRTAP1-5Q9BYS1 174 aa8.38□□□□□ -1.07
PPP4R3B-206ENST00000616407 BRK1Q8WUW1 75 aa8.38□□□□□ -1.07
PPP4R3B-206ENST00000616407 PCOTHQ58A44 107 aa8.37□□□□□ -1.07
PPP4R3B-206ENST00000616407 TENM1Q9UKZ4 2725 aa8.37□□□□□ -1.07
PPP4R3B-206ENST00000616407 hDV103S1A0JD37 113 aa8.35□□□□□ -1.07
PPP4R3B-206ENST00000616407 CSMD2Q7Z408 3487 aa8.33□□□□□ -1.08
PPP4R3B-206ENST00000616407 C1orf64Q8NEQ6 169 aa8.33□□□□□ -1.08
PPP4R3B-206ENST00000616407 ANAPC11Q9NYG5 84 aa8.33□□□□□ -1.08
PPP4R3B-206ENST00000616407 CUBNO60494 3623 aa8.32□□□□□ -1.08
PPP4R3B-206ENST00000616407 SPRR1AP35321 89 aa8.31□□□□□ -1.08
PPP4R3B-206ENST00000616407 PSORS1C2Q9UIG4 136 aa8.31□□□□□ -1.08
PPP4R3B-206ENST00000616407 RETNLBQ9BQ08 111 aa8.31□□□□□ -1.08
PPP4R3B-206ENST00000616407 OTOGQ6ZRI0 2925 aa8.31□□□□□ -1.08
PPP4R3B-206ENST00000616407 ZNF861PO60384 105 aa8.31□□□□□ -1.08
PPP4R3B-206ENST00000616407 VWFP04275 2813 aa8.31□□□□□ -1.08
PPP4R3B-206ENST00000616407 RPS28P62857 69 aaKnown RBP8.31□□□□□ -1.08
PPP4R3B-206ENST00000616407 A8MWP4 228 aa8.3□□□□□ -1.08
PPP4R3B-206ENST00000616407 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.29□□□□□ -1.08
PPP4R3B-206ENST00000616407 NBPF19A0A087WUL8 3843 aa8.29□□□□□ -1.08
PPP4R3B-206ENST00000616407 KLKP1Q107X0 134 aa8.28□□□□□ -1.08
PPP4R3B-206ENST00000616407 SPACA4Q8TDM5 124 aa8.27□□□□□ -1.08
PPP4R3B-206ENST00000616407 PRR15Q8IV56 129 aa8.26□□□□□ -1.09
PPP4R3B-206ENST00000616407 SPRR4Q96PI1 79 aa8.26□□□□□ -1.09
PPP4R3B-206ENST00000616407 V9GYY9 64 aa8.25□□□□□ -1.09
PPP4R3B-206ENST00000616407 TENM3Q9P273 2699 aa8.25□□□□□ -1.09
PPP4R3B-206ENST00000616407 TRAV22A0A0B4J277 110 aa8.24□□□□□ -1.09
PPP4R3B-206ENST00000616407 H7BZZ5 65 aa8.24□□□□□ -1.09
PPP4R3B-206ENST00000616407 TP53AIP1Q9HCN2 124 aa8.24□□□□□ -1.09
PPP4R3B-206ENST00000616407 TNP2Q05952 138 aa8.24□□□□□ -1.09
PPP4R3B-206ENST00000616407 LIMD2Q9BT23 127 aa8.24□□□□□ -1.09
PPP4R3B-206ENST00000616407 A0A0U1RQV1 116 aa8.22□□□□□ -1.09
PPP4R3B-206ENST00000616407 IGLV7-43P04211 117 aa8.21□□□□□ -1.09
PPP4R3B-206ENST00000616407 DSCR10P59022 87 aa8.21□□□□□ -1.09
PPP4R3B-206ENST00000616407 PSPHP1O15172 72 aa8.2□□□□□ -1.1
PPP4R3B-206ENST00000616407 C4orf26Q17RF5 130 aa8.2□□□□□ -1.1
PPP4R3B-206ENST00000616407 TYMSOSQ8TAI1 123 aa8.19□□□□□ -1.1
PPP4R3B-206ENST00000616407 H3BPC8 53 aa8.18□□□□□ -1.1
PPP4R3B-206ENST00000616407 SPTSSBQ8NFR3 76 aa8.18□□□□□ -1.1
PPP4R3B-206ENST00000616407 KRTAP4-16G5E9R7 235 aaPredicted RBP8.18□□□□□ -1.1
PPP4R3B-206ENST00000616407 PLA2G1BP04054 148 aaKnown RBP8.17□□□□□ -1.1
PPP4R3B-206ENST00000616407 OCR1Q9BZK8 76 aa8.17□□□□□ -1.1
PPP4R3B-206ENST00000616407 C8orf17Q9NRJ1 99 aa8.17□□□□□ -1.1
PPP4R3B-206ENST00000616407 SSBP3-AS1Q7Z2R9 100 aa8.17□□□□□ -1.1
PPP4R3B-206ENST00000616407 FBN1P35555 2871 aaKnown RBP8.16□□□□□ -1.1
PPP4R3B-206ENST00000616407 LINC00313P59037 77 aa8.16□□□□□ -1.1
PPP4R3B-206ENST00000616407 MRPL34Q9BQ48 92 aaKnown RBP8.16□□□□□ -1.1
PPP4R3B-206ENST00000616407 A6NED7 52 aa8.15□□□□□ -1.1
PPP4R3B-206ENST00000616407 CYSTM1Q9H1C7 97 aa8.15□□□□□ -1.1
PPP4R3B-206ENST00000616407 PRR15LQ9BU68 103 aa8.15□□□□□ -1.1
PPP4R3B-206ENST00000616407 IGKV2D-30A0A075B6S6 120 aa8.15□□□□□ -1.11
PPP4R3B-206ENST00000616407 IGKV2-30P06310 120 aa8.15□□□□□ -1.11
PPP4R3B-206ENST00000616407 A0A1B0GVX0 72 aa8.14□□□□□ -1.11
PPP4R3B-206ENST00000616407 PANO1I0J062 215 aa8.13□□□□□ -1.11
PPP4R3B-206ENST00000616407 SEC61GP60059 68 aa8.13□□□□□ -1.11
PPP4R3B-206ENST00000616407 KRTAP7-1Q8IUC3 87 aa8.11□□□□□ -1.11
PPP4R3B-206ENST00000616407 SMR3BP02814 79 aaPredicted RBP8.11□□□□□ -1.11
PPP4R3B-206ENST00000616407 ZFHX3Q15911 3703 aa8.1□□□□□ -1.11
PPP4R3B-206ENST00000616407 PLAC8Q9NZF1 115 aa8.1□□□□□ -1.11
PPP4R3B-206ENST00000616407 SPRR1BP22528 89 aa8.1□□□□□ -1.11
PPP4R3B-206ENST00000616407 IGLV8-61A0A075B6I0 122 aa8.08□□□□□ -1.12
PPP4R3B-206ENST00000616407 C8orf87E5RJ46 101 aa8.07□□□□□ -1.12
PPP4R3B-206ENST00000616407 VPS13CQ709C8 3753 aa8.06□□□□□ -1.12
PPP4R3B-206ENST00000616407 SPINK1P00995 79 aa8.05□□□□□ -1.12
PPP4R3B-206ENST00000616407 KRTAP11-1Q8IUC1 163 aa8.05□□□□□ -1.12
PPP4R3B-206ENST00000616407 LOC101927531A0A1B0GV80 90 aa8.04□□□□□ -1.12
PPP4R3B-206ENST00000616407 Q96NJ1 140 aa8.04□□□□□ -1.12
PPP4R3B-206ENST00000616407 FAM229AH3BQW9 127 aa8.03□□□□□ -1.12
PPP4R3B-206ENST00000616407 SPAG11AQ6PDA7 123 aa8.02□□□□□ -1.13
PPP4R3B-206ENST00000616407 LINC00472Q9H8W2 130 aa8.02□□□□□ -1.13
PPP4R3B-206ENST00000616407 Q6ZRN7 208 aaPredicted RBP8.01□□□□□ -1.13
PPP4R3B-206ENST00000616407 Q6ZR54 194 aa8.01□□□□□ -1.13
PPP4R3B-206ENST00000616407 ACYP2P14621 99 aa8.01□□□□□ -1.13
PPP4R3B-206ENST00000616407 LINC00304Q8N9R0 145 aa7.99□□□□□ -1.13
PPP4R3B-206ENST00000616407 KRTAP10-2P60368 255 aa7.99□□□□□ -1.13
PPP4R3B-206ENST00000616407 COA5Q86WW8 74 aa7.99□□□□□ -1.13
PPP4R3B-206ENST00000616407 C7orf65Q6ZTY9 151 aa7.98□□□□□ -1.13
PPP4R3B-206ENST00000616407 MMP24-AS1A0A0U1RRL7 71 aa7.97□□□□□ -1.13
PPP4R3B-206ENST00000616407 LINC00336Q6ZUF6 198 aa7.97□□□□□ -1.13
PPP4R3B-206ENST00000616407 PRO0628Q9UI54 55 aa7.96□□□□□ -1.13
PPP4R3B-206ENST00000616407 ANK3Q12955 4377 aaKnown RBP7.96□□□□□ -1.14
PPP4R3B-206ENST00000616407 PKD1L1Q8TDX9 2849 aa7.96□□□□□ -1.14
PPP4R3B-206ENST00000616407 A8MUN3 132 aa7.95□□□□□ -1.14
PPP4R3B-206ENST00000616407 C1orf195Q5TG92 126 aa7.95□□□□□ -1.14
PPP4R3B-206ENST00000616407 CD164Q04900 197 aa7.94□□□□□ -1.14
PPP4R3B-206ENST00000616407 PMAIP1Q13794 54 aa7.94□□□□□ -1.14
PPP4R3B-206ENST00000616407 KRTAP10-1P60331 282 aa7.93□□□□□ -1.14
PPP4R3B-206ENST00000616407 TRRAPQ9Y4A5 3859 aa7.92□□□□□ -1.14
PPP4R3B-206ENST00000616407 SPANXA2-OT1Q8N9U9 137 aa7.91□□□□□ -1.14
PPP4R3B-206ENST00000616407 C9orf92A6NGG3 77 aa7.89□□□□□ -1.15
PPP4R3B-206ENST00000616407 PRR26Q8N8Z3 221 aa7.89□□□□□ -1.15
PPP4R3B-206ENST00000616407 LINC00483Q53H64 154 aa7.89□□□□□ -1.15
PPP4R3B-206ENST00000616407 A0A1B0GU69 56 aa7.88□□□□□ -1.15
PPP4R3B-206ENST00000616407 FAM229BQ4G0N7 80 aa7.88□□□□□ -1.15
PPP4R3B-206ENST00000616407 OXTP01178 125 aa7.85□□□□□ -1.15
PPP4R3B-206ENST00000616407 ZNF469Q96JG9 3925 aaPredicted RBP7.85□□□□□ -1.15
PPP4R3B-206ENST00000616407 CYP4F30PQ9H0H9 118 aa7.85□□□□□ -1.15
PPP4R3B-206ENST00000616407 TENM2Q9NT68 2774 aa7.83□□□□□ -1.16
PPP4R3B-206ENST00000616407 KRTAP29-1A8MX34 341 aaPredicted RBP7.82□□□□□ -1.16
PPP4R3B-206ENST00000616407 KRTAP13-1Q8IUC0 172 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms