RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 EP400Q96L91 3159 aa3.98□□□□□ -1.77
CLCN3-211ENST00000613795 KRTAP1-5Q9BYS1 174 aa3.98□□□□□ -1.77
CLCN3-211ENST00000613795 KRTAP11-1Q8IUC1 163 aa3.98□□□□□ -1.77
CLCN3-211ENST00000613795 CHD8Q9HCK8 2581 aa3.98□□□□□ -1.77
CLCN3-211ENST00000613795 KRTAP10-1P60331 282 aa3.98□□□□□ -1.77
CLCN3-211ENST00000613795 C20orf166-AS1Q96NR2 134 aa3.96□□□□□ -1.78
CLCN3-211ENST00000613795 KRTAP21-3Q3LHN1 58 aa3.95□□□□□ -1.78
CLCN3-211ENST00000613795 JMJD1CQ15652 2540 aa3.95□□□□□ -1.78
CLCN3-211ENST00000613795 NOTCH2NLQ7Z3S9 236 aa3.95□□□□□ -1.78
CLCN3-211ENST00000613795 KRTAP23-1A1A580 65 aa3.94□□□□□ -1.78
CLCN3-211ENST00000613795 ANKRD11Q6UB99 2663 aaPredicted RBP3.94□□□□□ -1.78
CLCN3-211ENST00000613795 PLAC4Q8WY50 150 aa3.93□□□□□ -1.78
CLCN3-211ENST00000613795 M0QZ58 72 aa3.93□□□□□ -1.78
CLCN3-211ENST00000613795 KRTAP10-2P60368 255 aa3.93□□□□□ -1.78
CLCN3-211ENST00000613795 SRCAPQ6ZRS2 3230 aa3.9□□□□□ -1.78
CLCN3-211ENST00000613795 MTORP42345 2549 aa3.9□□□□□ -1.79
CLCN3-211ENST00000613795 BPTFQ12830 3046 aa3.89□□□□□ -1.79
CLCN3-211ENST00000613795 Q6ZRN7 208 aaPredicted RBP3.88□□□□□ -1.79
CLCN3-211ENST00000613795 ZFYVE26Q68DK2 2539 aa3.88□□□□□ -1.79
CLCN3-211ENST00000613795 KRTAP7-1Q8IUC3 87 aa3.86□□□□□ -1.79
CLCN3-211ENST00000613795 CEP295Q9C0D2 2601 aa3.86□□□□□ -1.79
CLCN3-211ENST00000613795 KRTAP13-1Q8IUC0 172 aa3.85□□□□□ -1.79
CLCN3-211ENST00000613795 ACANP16112 2415 aa3.83□□□□□ -1.8
CLCN3-211ENST00000613795 POLQO75417 2590 aa3.83□□□□□ -1.8
CLCN3-211ENST00000613795 PP632Q6XCG6 107 aa3.82□□□□□ -1.8
CLCN3-211ENST00000613795 CENPFP49454 3210 aa3.81□□□□□ -1.8
CLCN3-211ENST00000613795 H0YAA0 97 aa3.8□□□□□ -1.8
CLCN3-211ENST00000613795 P0C880 135 aa3.8□□□□□ -1.8
CLCN3-211ENST00000613795 FASNP49327 2511 aaKnown RBP3.78□□□□□ -1.8
CLCN3-211ENST00000613795 KRTAP13-2Q52LG2 175 aa3.77□□□□□ -1.81
CLCN3-211ENST00000613795 C10orf95Q9H7T3 257 aa3.75□□□□□ -1.81
CLCN3-211ENST00000613795 SPTBN4Q9H254 2564 aa3.73□□□□□ -1.81
CLCN3-211ENST00000613795 TNP1P09430 55 aa3.73□□□□□ -1.81
CLCN3-211ENST00000613795 EPG5Q9HCE0 2579 aa3.72□□□□□ -1.81
CLCN3-211ENST00000613795 GOLGB1Q14789 3259 aaKnown RBP3.71□□□□□ -1.82
CLCN3-211ENST00000613795 DNAH12Q6ZR08 3092 aa3.69□□□□□ -1.82
CLCN3-211ENST00000613795 DMBT1Q9UGM3 2413 aaPredicted RBP3.68□□□□□ -1.82
CLCN3-211ENST00000613795 PRRC2CQ9Y520 2896 aaKnown RBP3.67□□□□□ -1.82
CLCN3-211ENST00000613795 KRTAP3-3Q9BYR6 98 aa3.66□□□□□ -1.82
CLCN3-211ENST00000613795 KRTAP3-2Q9BYR7 98 aa3.66□□□□□ -1.82
CLCN3-211ENST00000613795 FLG2Q5D862 2391 aaPredicted RBP3.64□□□□□ -1.83
CLCN3-211ENST00000613795 FLNAP21333 2647 aaKnown RBP3.64□□□□□ -1.83
CLCN3-211ENST00000613795 KRTAP13-3Q3SY46 172 aa3.64□□□□□ -1.83
CLCN3-211ENST00000613795 CENPEQ02224 2701 aa3.63□□□□□ -1.83
CLCN3-211ENST00000613795 TPRXLQ17RH7 258 aa3.63□□□□□ -1.83
CLCN3-211ENST00000613795 USP24Q9UPU5 2620 aa3.61□□□□□ -1.83
CLCN3-211ENST00000613795 KRTAP1-4P0C5Y4 121 aa3.61□□□□□ -1.83
CLCN3-211ENST00000613795 ITPR3Q14573 2671 aa3.61□□□□□ -1.83
CLCN3-211ENST00000613795 UNC79Q9P2D8 2635 aa3.6□□□□□ -1.83
CLCN3-211ENST00000613795 A0A0C4DFX4 3053 aa3.6□□□□□ -1.83
CLCN3-211ENST00000613795 XP32Q5T750 250 aa3.6□□□□□ -1.83
CLCN3-211ENST00000613795 KRTAP10-8P60410 259 aa3.59□□□□□ -1.83
CLCN3-211ENST00000613795 KMT2BQ9UMN6 2715 aaPredicted RBP3.59□□□□□ -1.84
CLCN3-211ENST00000613795 NBEAL1Q6ZS30 2694 aa3.58□□□□□ -1.84
CLCN3-211ENST00000613795 GCN1Q92616 2671 aaKnown RBP3.58□□□□□ -1.84
CLCN3-211ENST00000613795 ATRQ13535 2644 aa3.57□□□□□ -1.84
CLCN3-211ENST00000613795 HECTD1Q9ULT8 2610 aa3.56□□□□□ -1.84
CLCN3-211ENST00000613795 FLNBO75369 2602 aaKnown RBP3.56□□□□□ -1.84
CLCN3-211ENST00000613795 MGAM2Q2M2H8 2515 aa3.55□□□□□ -1.84
CLCN3-211ENST00000613795 HELZ2Q9BYK8 2649 aaKnown RBP3.55□□□□□ -1.84
CLCN3-211ENST00000613795 CEP350Q5VT06 3117 aa3.53□□□□□ -1.84
CLCN3-211ENST00000613795 CHD6Q8TD26 2715 aa3.53□□□□□ -1.84
CLCN3-211ENST00000613795 PRO2289Q9P1D8 64 aa3.53□□□□□ -1.84
CLCN3-211ENST00000613795 CHD7Q9P2D1 2997 aa3.52□□□□□ -1.85
CLCN3-211ENST00000613795 ZNF292O60281 2723 aa3.5□□□□□ -1.85
CLCN3-211ENST00000613795 C5orf42Q9H799 3197 aa3.5□□□□□ -1.85
CLCN3-211ENST00000613795 AKAP13Q12802 2813 aa3.5□□□□□ -1.85
CLCN3-211ENST00000613795 CHD9Q3L8U1 2897 aa3.5□□□□□ -1.85
CLCN3-211ENST00000613795 UTRNP46939 3433 aa3.49□□□□□ -1.85
CLCN3-211ENST00000613795 KRTAP15-1Q3LI76 137 aa3.49□□□□□ -1.85
CLCN3-211ENST00000613795 HTTP42858 3142 aa3.49□□□□□ -1.85
CLCN3-211ENST00000613795 KRTAP12-2P59991 146 aa3.48□□□□□ -1.85
CLCN3-211ENST00000613795 STAB2Q8WWQ8 2551 aa3.48□□□□□ -1.85
CLCN3-211ENST00000613795 PCNTO95613 3336 aa3.47□□□□□ -1.85
CLCN3-211ENST00000613795 NBEAL2Q6ZNJ1 2754 aa3.47□□□□□ -1.85
CLCN3-211ENST00000613795 BAHCC1Q9P281 2608 aa3.46□□□□□ -1.85
CLCN3-211ENST00000613795 A0A1B0GVY2 172 aa3.46□□□□□ -1.86
CLCN3-211ENST00000613795 KRTAP13-4Q3LI77 160 aa3.45□□□□□ -1.86
CLCN3-211ENST00000613795 TRANK1O15050 2925 aa3.45□□□□□ -1.86
CLCN3-211ENST00000613795 INE1O15225 51 aa3.45□□□□□ -1.86
CLCN3-211ENST00000613795 KRTAP12-1P59990 96 aa3.44□□□□□ -1.86
CLCN3-211ENST00000613795 ITPR1Q14643 2758 aa3.44□□□□□ -1.86
CLCN3-211ENST00000613795 MAST4O15021 2626 aa3.44□□□□□ -1.86
CLCN3-211ENST00000613795 CFAP54Q96N23 3096 aa3.43□□□□□ -1.86
CLCN3-211ENST00000613795 NOTCH1P46531 2555 aa3.43□□□□□ -1.86
CLCN3-211ENST00000613795 CFAP46Q8IYW2 2715 aa3.42□□□□□ -1.86
CLCN3-211ENST00000613795 STAB1Q9NY15 2570 aa3.41□□□□□ -1.86
CLCN3-211ENST00000613795 KRTAP10-10P60014 251 aa3.41□□□□□ -1.86
CLCN3-211ENST00000613795 TEP1Q99973 2627 aaKnown RBP3.37□□□□□ -1.87
CLCN3-211ENST00000613795 COL6A5A8TX70 2615 aa3.36□□□□□ -1.87
CLCN3-211ENST00000613795 MKI67P46013 3256 aaKnown RBP3.36□□□□□ -1.87
CLCN3-211ENST00000613795 SETXQ7Z333 2677 aaKnown RBP3.36□□□□□ -1.87
CLCN3-211ENST00000613795 MAP1AP78559 2803 aaPredicted RBP3.35□□□□□ -1.87
CLCN3-211ENST00000613795 KRTAP3-1Q9BYR8 98 aa3.35□□□□□ -1.87
CLCN3-211ENST00000613795 APCP25054 2843 aa3.35□□□□□ -1.87
CLCN3-211ENST00000613795 KRTAP10-6P60371 365 aaPredicted RBP3.33□□□□□ -1.88
CLCN3-211ENST00000613795 FRYQ5TBA9 3013 aa3.33□□□□□ -1.88
CLCN3-211ENST00000613795 NSD1Q96L73 2696 aaPredicted RBP3.32□□□□□ -1.88
CLCN3-211ENST00000613795 TEX15Q9BXT5 2789 aa3.32□□□□□ -1.88
CLCN3-211ENST00000613795 BRCA2P51587 3418 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms