RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 LINC00612Q8N6U2 182 aa6.92□□□□□ -1.3
CNTNAP3B-211ENST00000612828 WDFY4Q6ZS81 3184 aa6.91□□□□□ -1.3
CNTNAP3B-211ENST00000612828 PRUNE2Q8WUY3 3088 aa6.9□□□□□ -1.3
CNTNAP3B-211ENST00000612828 TRIOO75962 3097 aa6.89□□□□□ -1.31
CNTNAP3B-211ENST00000612828 XIRP2A4UGR9 3374 aa6.88□□□□□ -1.31
CNTNAP3B-211ENST00000612828 A0A1B0GW54 56 aa6.88□□□□□ -1.31
CNTNAP3B-211ENST00000612828 Q6ZR54 194 aa6.87□□□□□ -1.31
CNTNAP3B-211ENST00000612828 MGAQ8IWI9 3026 aa6.86□□□□□ -1.31
CNTNAP3B-211ENST00000612828 MGAM2Q2M2H8 2515 aa6.85□□□□□ -1.31
CNTNAP3B-211ENST00000612828 ZCCHC13Q8WW36 166 aaKnown RBP6.84□□□□□ -1.31
CNTNAP3B-211ENST00000612828 C19orf73Q9NVV2 129 aa6.83□□□□□ -1.32
CNTNAP3B-211ENST00000612828 GIG44P09565 113 aaPredicted RBP6.82□□□□□ -1.32
CNTNAP3B-211ENST00000612828 TRANK1O15050 2925 aa6.81□□□□□ -1.32
CNTNAP3B-211ENST00000612828 K7EIL1 84 aa6.81□□□□□ -1.32
CNTNAP3B-211ENST00000612828 TNP2Q05952 138 aa6.81□□□□□ -1.32
CNTNAP3B-211ENST00000612828 ATRQ13535 2644 aa6.81□□□□□ -1.32
CNTNAP3B-211ENST00000612828 MAP1AP78559 2803 aaPredicted RBP6.8□□□□□ -1.32
CNTNAP3B-211ENST00000612828 RPL37P61927 97 aaKnown RBP6.8□□□□□ -1.32
CNTNAP3B-211ENST00000612828 KRTAP10-11P60412 298 aa6.79□□□□□ -1.32
CNTNAP3B-211ENST00000612828 SPRR4Q96PI1 79 aa6.79□□□□□ -1.32
CNTNAP3B-211ENST00000612828 FREM2Q5SZK8 3169 aa6.78□□□□□ -1.32
CNTNAP3B-211ENST00000612828 CDH23Q9H251 3354 aa6.78□□□□□ -1.32
CNTNAP3B-211ENST00000612828 A0A096LNT2 108 aa6.76□□□□□ -1.33
CNTNAP3B-211ENST00000612828 NBEAQ8NFP9 2946 aa6.74□□□□□ -1.33
CNTNAP3B-211ENST00000612828 NDUFAF8A1L188 74 aa6.74□□□□□ -1.33
CNTNAP3B-211ENST00000612828 LINC01558Q9Y6Z2 57 aa6.73□□□□□ -1.33
CNTNAP3B-211ENST00000612828 VPS13AQ96RL7 3174 aa6.73□□□□□ -1.33
CNTNAP3B-211ENST00000612828 FLNAP21333 2647 aaKnown RBP6.72□□□□□ -1.33
CNTNAP3B-211ENST00000612828 PLAC8Q9NZF1 115 aa6.72□□□□□ -1.33
CNTNAP3B-211ENST00000612828 KCNQ1DNQ9H478 68 aa6.71□□□□□ -1.33
CNTNAP3B-211ENST00000612828 FAM229BQ4G0N7 80 aa6.71□□□□□ -1.34
CNTNAP3B-211ENST00000612828 CASC10Q5T4H9 136 aa6.7□□□□□ -1.34
CNTNAP3B-211ENST00000612828 KRTAP10-3P60369 221 aa6.69□□□□□ -1.34
CNTNAP3B-211ENST00000612828 VCANP13611 3396 aa6.68□□□□□ -1.34
CNTNAP3B-211ENST00000612828 MAST4O15021 2626 aa6.68□□□□□ -1.34
CNTNAP3B-211ENST00000612828 DSPP15924 2871 aaKnown RBP6.67□□□□□ -1.34
CNTNAP3B-211ENST00000612828 Q75L30 129 aa6.66□□□□□ -1.34
CNTNAP3B-211ENST00000612828 FRYQ5TBA9 3013 aa6.66□□□□□ -1.34
CNTNAP3B-211ENST00000612828 SPANXA2-OT1Q8N9U9 137 aa6.66□□□□□ -1.34
CNTNAP3B-211ENST00000612828 CFAP46Q8IYW2 2715 aa6.66□□□□□ -1.34
CNTNAP3B-211ENST00000612828 PRR34Q9NV39 138 aa6.66□□□□□ -1.34
CNTNAP3B-211ENST00000612828 ITPR3Q14573 2671 aa6.66□□□□□ -1.34
CNTNAP3B-211ENST00000612828 ZNF292O60281 2723 aa6.66□□□□□ -1.34
CNTNAP3B-211ENST00000612828 CELSR3Q9NYQ7 3312 aa6.65□□□□□ -1.35
CNTNAP3B-211ENST00000612828 KRTAP10-8P60410 259 aa6.65□□□□□ -1.35
CNTNAP3B-211ENST00000612828 CYSTM1Q9H1C7 97 aa6.65□□□□□ -1.35
CNTNAP3B-211ENST00000612828 SZT2Q5T011 3432 aa6.64□□□□□ -1.35
CNTNAP3B-211ENST00000612828 CHD6Q8TD26 2715 aa6.64□□□□□ -1.35
CNTNAP3B-211ENST00000612828 AKAP13Q12802 2813 aa6.64□□□□□ -1.35
CNTNAP3B-211ENST00000612828 SPRR1BP22528 89 aa6.63□□□□□ -1.35
CNTNAP3B-211ENST00000612828 A8MUU9 505 aa6.61□□□□□ -1.35
CNTNAP3B-211ENST00000612828 DNAH14Q0VDD8 3507 aa6.59□□□□□ -1.35
CNTNAP3B-211ENST00000612828 LAMA1P25391 3075 aa6.59□□□□□ -1.35
CNTNAP3B-211ENST00000612828 TNP1P09430 55 aa6.58□□□□□ -1.36
CNTNAP3B-211ENST00000612828 KRTAP1-3Q8IUG1 177 aa6.58□□□□□ -1.36
CNTNAP3B-211ENST00000612828 NOTCH1P46531 2555 aa6.57□□□□□ -1.36
CNTNAP3B-211ENST00000612828 Q5W150 140 aa6.56□□□□□ -1.36
CNTNAP3B-211ENST00000612828 GCN1Q92616 2671 aaKnown RBP6.56□□□□□ -1.36
CNTNAP3B-211ENST00000612828 NBEAL2Q6ZNJ1 2754 aa6.55□□□□□ -1.36
CNTNAP3B-211ENST00000612828 REV3LO60673 3130 aa6.55□□□□□ -1.36
CNTNAP3B-211ENST00000612828 A0A1B0GVY2 172 aa6.54□□□□□ -1.36
CNTNAP3B-211ENST00000612828 STAB2Q8WWQ8 2551 aa6.54□□□□□ -1.36
CNTNAP3B-211ENST00000612828 OXTP01178 125 aa6.54□□□□□ -1.36
CNTNAP3B-211ENST00000612828 KRTAP1-1Q07627 177 aa6.54□□□□□ -1.36
CNTNAP3B-211ENST00000612828 SPEGQ15772 3267 aa6.52□□□□□ -1.37
CNTNAP3B-211ENST00000612828 UNC79Q9P2D8 2635 aa6.52□□□□□ -1.37
CNTNAP3B-211ENST00000612828 ATMQ13315 3056 aa6.52□□□□□ -1.37
CNTNAP3B-211ENST00000612828 CNBPP62633 177 aaKnown RBP6.52□□□□□ -1.37
CNTNAP3B-211ENST00000612828 TEP1Q99973 2627 aaKnown RBP6.51□□□□□ -1.37
CNTNAP3B-211ENST00000612828 TACC2O95359 2948 aa6.49□□□□□ -1.37
CNTNAP3B-211ENST00000612828 KALRNO60229 2985 aa6.49□□□□□ -1.37
CNTNAP3B-211ENST00000612828 FRYLO94915 3013 aa6.49□□□□□ -1.37
CNTNAP3B-211ENST00000612828 BOD1L1Q8NFC6 3051 aa6.49□□□□□ -1.37
CNTNAP3B-211ENST00000612828 A8MU10 97 aa6.48□□□□□ -1.37
CNTNAP3B-211ENST00000612828 ADGRG4Q8IZF6 3080 aa6.48□□□□□ -1.37
CNTNAP3B-211ENST00000612828 UBR5O95071 2799 aaPredicted RBP6.47□□□□□ -1.37
CNTNAP3B-211ENST00000612828 OCR1Q9BZK8 76 aa6.47□□□□□ -1.37
CNTNAP3B-211ENST00000612828 Q5XG85 94 aa6.46□□□□□ -1.37
CNTNAP3B-211ENST00000612828 DMXL2Q8TDJ6 3036 aa6.45□□□□□ -1.38
CNTNAP3B-211ENST00000612828 TEX15Q9BXT5 2789 aa6.42□□□□□ -1.38
CNTNAP3B-211ENST00000612828 FLNCQ14315 2725 aa6.4□□□□□ -1.39
CNTNAP3B-211ENST00000612828 ZZEF1O43149 2961 aa6.4□□□□□ -1.39
CNTNAP3B-211ENST00000612828 Q5VV11 94 aa6.39□□□□□ -1.39
CNTNAP3B-211ENST00000612828 MMP24-AS1A0A0U1RRL7 71 aa6.39□□□□□ -1.39
CNTNAP3B-211ENST00000612828 PANO1I0J062 215 aa6.39□□□□□ -1.39
CNTNAP3B-211ENST00000612828 COL12A1Q99715 3063 aa6.38□□□□□ -1.39
CNTNAP3B-211ENST00000612828 NBEAL1Q6ZS30 2694 aa6.38□□□□□ -1.39
CNTNAP3B-211ENST00000612828 COL6A5A8TX70 2615 aa6.38□□□□□ -1.39
CNTNAP3B-211ENST00000612828 IGSF10Q6WRI0 2623 aa6.38□□□□□ -1.39
CNTNAP3B-211ENST00000612828 COL6A3P12111 3177 aa6.37□□□□□ -1.39
CNTNAP3B-211ENST00000612828 ASH1LQ9NR48 2969 aaKnown RBP6.36□□□□□ -1.39
CNTNAP3B-211ENST00000612828 ITPR1Q14643 2758 aa6.36□□□□□ -1.39
CNTNAP3B-211ENST00000612828 CFAP47Q6ZTR5 3102 aa6.36□□□□□ -1.39
CNTNAP3B-211ENST00000612828 SETXQ7Z333 2677 aaKnown RBP6.34□□□□□ -1.39
CNTNAP3B-211ENST00000612828 NSD1Q96L73 2696 aaPredicted RBP6.34□□□□□ -1.39
CNTNAP3B-211ENST00000612828 KRTAP25-1Q3LHN0 102 aa6.33□□□□□ -1.4
CNTNAP3B-211ENST00000612828 LRBAP50851 2863 aa6.28□□□□□ -1.4
CNTNAP3B-211ENST00000612828 KRTAP26-1Q6PEX3 210 aa6.27□□□□□ -1.41
CNTNAP3B-211ENST00000612828 SPRR1AP35321 89 aa6.26□□□□□ -1.41
CNTNAP3B-211ENST00000612828 PP632Q6XCG6 107 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms