RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 RETNLBQ9BQ08 111 aa13.13□□□□□ -0.31
PNKP-205ENST00000595081 SNCGO76070 127 aa13.12□□□□□ -0.31
PNKP-205ENST00000595081 SPINK1P00995 79 aa13.12□□□□□ -0.31
PNKP-205ENST00000595081 PRR4Q16378 134 aa13.12□□□□□ -0.31
PNKP-205ENST00000595081 A0A1B0GX51 115 aa13.08□□□□□ -0.32
PNKP-205ENST00000595081 COX6CP09669 75 aa13.08□□□□□ -0.32
PNKP-205ENST00000595081 A0A0G2JQZ4 141 aa13.07□□□□□ -0.32
PNKP-205ENST00000595081 HRCT1Q6UXD1 115 aa13.07□□□□□ -0.32
PNKP-205ENST00000595081 F8WEM9 126 aa13.06□□□□□ -0.32
PNKP-205ENST00000595081 BATFQ16520 125 aa13.06□□□□□ -0.32
PNKP-205ENST00000595081 PPDPFLQ8WWR9 84 aa13.06□□□□□ -0.32
PNKP-205ENST00000595081 OCIAD2Q56VL3 154 aa13.04□□□□□ -0.32
PNKP-205ENST00000595081 SNHG12Q9BXW3 62 aa13.04□□□□□ -0.32
PNKP-205ENST00000595081 LRP2P98164 4655 aa13.04□□□□□ -0.32
PNKP-205ENST00000595081 SCGB1C2P0DMR2 95 aa13.03□□□□□ -0.32
PNKP-205ENST00000595081 RPS29P62273 56 aaKnown RBP13.03□□□□□ -0.32
PNKP-205ENST00000595081 NAA38Q9BRA0 125 aaKnown RBP13.02□□□□□ -0.33
PNKP-205ENST00000595081 LPAP08519 4548 aa13□□□□□ -0.33
PNKP-205ENST00000595081 DNAL4O96015 105 aa12.99□□□□□ -0.33
PNKP-205ENST00000595081 IGLV8-61A0A075B6I0 122 aa12.98□□□□□ -0.33
PNKP-205ENST00000595081 CD164Q04900 197 aa12.98□□□□□ -0.33
PNKP-205ENST00000595081 H3BUT2 72 aa12.97□□□□□ -0.33
PNKP-205ENST00000595081 FABP2P12104 132 aa12.97□□□□□ -0.33
PNKP-205ENST00000595081 LST1O00453 97 aa12.95□□□□□ -0.34
PNKP-205ENST00000595081 NDUFV3P56181 108 aaKnown RBP12.95□□□□□ -0.34
PNKP-205ENST00000595081 IGFL1Q6UW32 110 aa12.95□□□□□ -0.34
PNKP-205ENST00000595081 ORMDL1Q9P0S3 153 aa12.95□□□□□ -0.34
PNKP-205ENST00000595081 IGLV7-46A0A075B6I9 117 aa12.94□□□□□ -0.34
PNKP-205ENST00000595081 GHRHP01286 108 aa12.94□□□□□ -0.34
PNKP-205ENST00000595081 Q6JHZ5 121 aa12.94□□□□□ -0.34
PNKP-205ENST00000595081 TRACP01848 142 aa12.93□□□□□ -0.34
PNKP-205ENST00000595081 LIMD2Q9BT23 127 aa12.93□□□□□ -0.34
PNKP-205ENST00000595081 UBR4Q5T4S7 5183 aa12.9□□□□□ -0.34
PNKP-205ENST00000595081 FP248Q71RG6 208 aaPredicted RBP12.9□□□□□ -0.34
PNKP-205ENST00000595081 TCL1BO95988 128 aa12.88□□□□□ -0.35
PNKP-205ENST00000595081 H3BMG7 143 aa12.87□□□□□ -0.35
PNKP-205ENST00000595081 H3BQ85 93 aa12.86□□□□□ -0.35
PNKP-205ENST00000595081 TMEM256-PLSCR3K7ERE1 68 aa12.85□□□□□ -0.35
PNKP-205ENST00000595081 A0A1B0GV72 72 aa12.84□□□□□ -0.35
PNKP-205ENST00000595081 TAX1BP3O14907 124 aa12.84□□□□□ -0.35
PNKP-205ENST00000595081 ATXN8Q156A1 80 aa12.84□□□□□ -0.35
PNKP-205ENST00000595081 TPRXLQ17RH7 258 aa12.83□□□□□ -0.36
PNKP-205ENST00000595081 Q5XG85 94 aa12.83□□□□□ -0.36
PNKP-205ENST00000595081 TRBV7-7A0A0K0K1E9 115 aa12.82□□□□□ -0.36
PNKP-205ENST00000595081 C9orf118A6NHY6 69 aa12.82□□□□□ -0.36
PNKP-205ENST00000595081 LYRM7Q5U5X0 104 aa12.81□□□□□ -0.36
PNKP-205ENST00000595081 BAALC-AS2P0C853 105 aa12.79□□□□□ -0.36
PNKP-205ENST00000595081 UBE2V1Q13404 147 aa12.79□□□□□ -0.36
PNKP-205ENST00000595081 PCP4L1A6NKN8 68 aa12.77□□□□□ -0.37
PNKP-205ENST00000595081 KRTAP13-3Q3SY46 172 aa12.76□□□□□ -0.37
PNKP-205ENST00000595081 C1orf195Q5TG92 126 aa12.76□□□□□ -0.37
PNKP-205ENST00000595081 A0A1W2PPM0 123 aa12.75□□□□□ -0.37
PNKP-205ENST00000595081 ANKRD29Q8N6D5 301 aa12.75□□□□□ -0.37
PNKP-205ENST00000595081 CDIP1Q9H305 208 aa12.75□□□□□ -0.37
PNKP-205ENST00000595081 TRBV20-1A0A075B6N2 111 aa12.74□□□□□ -0.37
PNKP-205ENST00000595081 Q6Q795 121 aa12.74□□□□□ -0.37
PNKP-205ENST00000595081 TEN1Q86WV5 123 aa12.74□□□□□ -0.37
PNKP-205ENST00000595081 A0A1W2PNM2 257 aa12.71□□□□□ -0.37
PNKP-205ENST00000595081 COL5A1-AS1Q5SY13 56 aa12.71□□□□□ -0.37
PNKP-205ENST00000595081 C9JAW5 83 aa12.69□□□□□ -0.38
PNKP-205ENST00000595081 ASB16-AS1Q495Z4 193 aa12.69□□□□□ -0.38
PNKP-205ENST00000595081 A0A087WSZ3 146 aa12.67□□□□□ -0.38
PNKP-205ENST00000595081 RBM3P98179 157 aaKnown RBP12.66□□□□□ -0.38
PNKP-205ENST00000595081 TRBV7-4A0A0J9YYF1 115 aa12.64□□□□□ -0.39
PNKP-205ENST00000595081 SS18L2Q9UHA2 77 aa12.64□□□□□ -0.39
PNKP-205ENST00000595081 CCKP06307 115 aa12.63□□□□□ -0.39
PNKP-205ENST00000595081 DSCR8Q96T75 97 aa12.62□□□□□ -0.39
PNKP-205ENST00000595081 SPCS1Q9Y6A9 102 aa12.62□□□□□ -0.39
PNKP-205ENST00000595081 C9orf92A6NGG3 77 aa12.61□□□□□ -0.39
PNKP-205ENST00000595081 MTURNQ8N3F0 131 aa12.61□□□□□ -0.39
PNKP-205ENST00000595081 RNF213Q63HN8 5207 aa12.61□□□□□ -0.39
PNKP-205ENST00000595081 VPS25Q9BRG1 176 aa12.59□□□□□ -0.39
PNKP-205ENST00000595081 JMJD7-PLA2G4BH0Y9G9 81 aa12.56□□□□□ -0.4
PNKP-205ENST00000595081 XP32Q5T750 250 aa12.56□□□□□ -0.4
PNKP-205ENST00000595081 H3BT86 120 aa12.54□□□□□ -0.4
PNKP-205ENST00000595081 Q96NJ1 140 aa12.53□□□□□ -0.4
PNKP-205ENST00000595081 C14orf132Q9NPU4 83 aa12.52□□□□□ -0.41
PNKP-205ENST00000595081 MUC17Q685J3 4493 aa12.51□□□□□ -0.41
PNKP-205ENST00000595081 Q6ZQT0 140 aa12.51□□□□□ -0.41
PNKP-205ENST00000595081 OBSCN-AS1Q96MR7 158 aa12.51□□□□□ -0.41
PNKP-205ENST00000595081 LOC110117498A0A087WWA1 95 aa12.5□□□□□ -0.41
PNKP-205ENST00000595081 K7EP34 96 aa12.48□□□□□ -0.41
PNKP-205ENST00000595081 PDE6GP18545 87 aa12.44□□□□□ -0.42
PNKP-205ENST00000595081 SMCPP49901 116 aaPredicted RBP12.44□□□□□ -0.42
PNKP-205ENST00000595081 DEFB116Q30KQ4 102 aa12.43□□□□□ -0.42
PNKP-205ENST00000595081 SIGMAR1Q99720 223 aa12.43□□□□□ -0.42
PNKP-205ENST00000595081 LINC00472Q9H8W2 130 aa12.42□□□□□ -0.42
PNKP-205ENST00000595081 IGKV4-1P06312 121 aa12.41□□□□□ -0.42
PNKP-205ENST00000595081 SEC61BP60468 96 aaKnown RBP12.41□□□□□ -0.42
PNKP-205ENST00000595081 PRO0461Q9UI25 63 aa12.41□□□□□ -0.42
PNKP-205ENST00000595081 MUC2Q02817 5179 aa12.4□□□□□ -0.42
PNKP-205ENST00000595081 C21orf62-AS1Q17RA5 79 aa12.37□□□□□ -0.43
PNKP-205ENST00000595081 GTF2H5Q6ZYL4 71 aa12.36□□□□□ -0.43
PNKP-205ENST00000595081 A0A1B0GW54 56 aa12.34□□□□□ -0.43
PNKP-205ENST00000595081 DSCR10P59022 87 aa12.31□□□□□ -0.44
PNKP-205ENST00000595081 RPL37P61927 97 aaKnown RBP12.31□□□□□ -0.44
PNKP-205ENST00000595081 PCOTHQ58A44 107 aa12.31□□□□□ -0.44
PNKP-205ENST00000595081 KRTAP4-1Q9BYQ7 146 aa12.29□□□□□ -0.44
PNKP-205ENST00000595081 IGHV6-1A0A0B4J1U7 121 aa12.25□□□□□ -0.45
PNKP-205ENST00000595081 J3KT08 172 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms