RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 A0A0G2JQZ4 141 aa5.67□□□□□ -1.5
DDX39A-220ENST00000593008 A0A1W2PPM0 123 aa5.67□□□□□ -1.5
DDX39A-220ENST00000593008 H3BQ85 93 aa5.67□□□□□ -1.5
DDX39A-220ENST00000593008 LST1O00453 97 aa5.67□□□□□ -1.5
DDX39A-220ENST00000593008 IGLV9-49A0A0B4J1Y8 123 aa5.66□□□□□ -1.5
DDX39A-220ENST00000593008 A0A1B0GV72 72 aa5.66□□□□□ -1.5
DDX39A-220ENST00000593008 OCIAD2Q56VL3 154 aa5.66□□□□□ -1.5
DDX39A-220ENST00000593008 C4orf48Q5BLP8 95 aa5.66□□□□□ -1.5
DDX39A-220ENST00000593008 MTURNQ8N3F0 131 aa5.66□□□□□ -1.5
DDX39A-220ENST00000593008 SPRR1BP22528 89 aa5.65□□□□□ -1.5
DDX39A-220ENST00000593008 MOBPQ13875 183 aa5.65□□□□□ -1.5
DDX39A-220ENST00000593008 A0A1B0GX51 115 aa5.64□□□□□ -1.51
DDX39A-220ENST00000593008 SPAG11AQ6PDA7 123 aa5.64□□□□□ -1.51
DDX39A-220ENST00000593008 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.64□□□□□ -1.51
DDX39A-220ENST00000593008 LAMTOR3Q9UHA4 124 aa5.64□□□□□ -1.51
DDX39A-220ENST00000593008 UBR4Q5T4S7 5183 aa5.63□□□□□ -1.51
DDX39A-220ENST00000593008 TEX49A0A1B0GTD5 131 aa5.63□□□□□ -1.51
DDX39A-220ENST00000593008 C9orf153Q5TBE3 101 aa5.63□□□□□ -1.51
DDX39A-220ENST00000593008 SSBP3-AS1Q7Z2R9 100 aa5.63□□□□□ -1.51
DDX39A-220ENST00000593008 TYMSOSQ8TAI1 123 aa5.63□□□□□ -1.51
DDX39A-220ENST00000593008 PPDPFLQ8WWR9 84 aa5.63□□□□□ -1.51
DDX39A-220ENST00000593008 TRACP01848 142 aa5.62□□□□□ -1.51
DDX39A-220ENST00000593008 FABP2P12104 132 aa5.62□□□□□ -1.51
DDX39A-220ENST00000593008 ATXN8Q156A1 80 aa5.62□□□□□ -1.51
DDX39A-220ENST00000593008 SPCS1Q9Y6A9 102 aa5.62□□□□□ -1.51
DDX39A-220ENST00000593008 H3BMG7 143 aa5.61□□□□□ -1.51
DDX39A-220ENST00000593008 DNAL4O96015 105 aa5.61□□□□□ -1.51
DDX39A-220ENST00000593008 LYRM7Q5U5X0 104 aa5.61□□□□□ -1.51
DDX39A-220ENST00000593008 Q8NBF4 154 aa5.61□□□□□ -1.51
DDX39A-220ENST00000593008 C9JAW5 83 aa5.6□□□□□ -1.51
DDX39A-220ENST00000593008 F8WEM9 126 aa5.6□□□□□ -1.51
DDX39A-220ENST00000593008 ORMDL1Q9P0S3 153 aa5.6□□□□□ -1.51
DDX39A-220ENST00000593008 K7EP34 96 aa5.59□□□□□ -1.51
DDX39A-220ENST00000593008 LRP2P98164 4655 aa5.58□□□□□ -1.52
DDX39A-220ENST00000593008 A0A1B0GV90 55 aa5.58□□□□□ -1.52
DDX39A-220ENST00000593008 HRCT1Q6UXD1 115 aa5.58□□□□□ -1.52
DDX39A-220ENST00000593008 BAALC-AS2P0C853 105 aa5.57□□□□□ -1.52
DDX39A-220ENST00000593008 SMCPP49901 116 aaPredicted RBP5.57□□□□□ -1.52
DDX39A-220ENST00000593008 NDUFV3P56181 108 aaKnown RBP5.57□□□□□ -1.52
DDX39A-220ENST00000593008 TRBV20-1A0A075B6N2 111 aa5.56□□□□□ -1.52
DDX39A-220ENST00000593008 LINC00304Q8N9R0 145 aa5.56□□□□□ -1.52
DDX39A-220ENST00000593008 PRO0461Q9UI25 63 aa5.56□□□□□ -1.52
DDX39A-220ENST00000593008 TMEM256-PLSCR3K7ERE1 68 aa5.55□□□□□ -1.52
DDX39A-220ENST00000593008 SPINK1P00995 79 aa5.55□□□□□ -1.52
DDX39A-220ENST00000593008 IGFL1Q6UW32 110 aa5.55□□□□□ -1.52
DDX39A-220ENST00000593008 PRR4Q16378 134 aa5.54□□□□□ -1.52
DDX39A-220ENST00000593008 Q6JHZ5 121 aa5.54□□□□□ -1.52
DDX39A-220ENST00000593008 ANKRD29Q8N6D5 301 aa5.54□□□□□ -1.52
DDX39A-220ENST00000593008 LPAP08519 4548 aa5.54□□□□□ -1.52
DDX39A-220ENST00000593008 IGLV8-61A0A075B6I0 122 aa5.53□□□□□ -1.52
DDX39A-220ENST00000593008 RETNLBQ9BQ08 111 aa5.53□□□□□ -1.52
DDX39A-220ENST00000593008 RPS29P62273 56 aaKnown RBP5.52□□□□□ -1.53
DDX39A-220ENST00000593008 CD164Q04900 197 aa5.52□□□□□ -1.53
DDX39A-220ENST00000593008 UBE2V1Q13404 147 aa5.52□□□□□ -1.53
DDX39A-220ENST00000593008 C21orf62-AS1Q17RA5 79 aa5.51□□□□□ -1.53
DDX39A-220ENST00000593008 LIMD2Q9BT23 127 aa5.51□□□□□ -1.53
DDX39A-220ENST00000593008 A0A1W2PNM2 257 aa5.5□□□□□ -1.53
DDX39A-220ENST00000593008 H3BT86 120 aa5.5□□□□□ -1.53
DDX39A-220ENST00000593008 C14orf132Q9NPU4 83 aa5.5□□□□□ -1.53
DDX39A-220ENST00000593008 RNF213Q63HN8 5207 aa5.49□□□□□ -1.53
DDX39A-220ENST00000593008 TRBV7-4A0A0J9YYF1 115 aa5.48□□□□□ -1.53
DDX39A-220ENST00000593008 GTF2H5Q6ZYL4 71 aa5.48□□□□□ -1.53
DDX39A-220ENST00000593008 OBSCN-AS1Q96MR7 158 aa5.47□□□□□ -1.53
DDX39A-220ENST00000593008 VPS25Q9BRG1 176 aa5.47□□□□□ -1.53
DDX39A-220ENST00000593008 TRBV7-7A0A0K0K1E9 115 aa5.46□□□□□ -1.54
DDX39A-220ENST00000593008 RBM3P98179 157 aaKnown RBP5.46□□□□□ -1.54
DDX39A-220ENST00000593008 JMJD7-PLA2G4BH0Y9G9 81 aa5.45□□□□□ -1.54
DDX39A-220ENST00000593008 Q6ZQT0 140 aa5.45□□□□□ -1.54
DDX39A-220ENST00000593008 A0A087WSZ3 146 aa5.44□□□□□ -1.54
DDX39A-220ENST00000593008 CCKP06307 115 aa5.44□□□□□ -1.54
DDX39A-220ENST00000593008 PDE6GP18545 87 aa5.44□□□□□ -1.54
DDX39A-220ENST00000593008 FP248Q71RG6 208 aaPredicted RBP5.44□□□□□ -1.54
DDX39A-220ENST00000593008 DSCR8Q96T75 97 aa5.44□□□□□ -1.54
DDX39A-220ENST00000593008 SS18L2Q9UHA2 77 aa5.44□□□□□ -1.54
DDX39A-220ENST00000593008 LOC110117498A0A087WWA1 95 aa5.43□□□□□ -1.54
DDX39A-220ENST00000593008 ETDBQ3ZM63 59 aa5.43□□□□□ -1.54
DDX39A-220ENST00000593008 TEN1Q86WV5 123 aa5.43□□□□□ -1.54
DDX39A-220ENST00000593008 Q5XG85 94 aa5.42□□□□□ -1.54
DDX39A-220ENST00000593008 A0A1B0GW54 56 aa5.41□□□□□ -1.54
DDX39A-220ENST00000593008 Q6Q795 121 aa5.41□□□□□ -1.54
DDX39A-220ENST00000593008 IGLV7-46A0A075B6I9 117 aa5.4□□□□□ -1.54
DDX39A-220ENST00000593008 F8W1H4 67 aa5.4□□□□□ -1.54
DDX39A-220ENST00000593008 C1orf195Q5TG92 126 aa5.4□□□□□ -1.54
DDX39A-220ENST00000593008 Q96NJ1 140 aa5.39□□□□□ -1.55
DDX39A-220ENST00000593008 MUC17Q685J3 4493 aa5.38□□□□□ -1.55
DDX39A-220ENST00000593008 DEFB116Q30KQ4 102 aa5.38□□□□□ -1.55
DDX39A-220ENST00000593008 ASB16-AS1Q495Z4 193 aa5.36□□□□□ -1.55
DDX39A-220ENST00000593008 CDIP1Q9H305 208 aa5.36□□□□□ -1.55
DDX39A-220ENST00000593008 TPRXLQ17RH7 258 aa5.35□□□□□ -1.55
DDX39A-220ENST00000593008 LINC00472Q9H8W2 130 aa5.34□□□□□ -1.55
DDX39A-220ENST00000593008 MUC2Q02817 5179 aa5.34□□□□□ -1.55
DDX39A-220ENST00000593008 C9orf92A6NGG3 77 aa5.33□□□□□ -1.56
DDX39A-220ENST00000593008 SIGMAR1Q99720 223 aa5.33□□□□□ -1.56
DDX39A-220ENST00000593008 KRTAP13-3Q3SY46 172 aa5.32□□□□□ -1.56
DDX39A-220ENST00000593008 LINC00846Q9NV44 126 aa5.32□□□□□ -1.56
DDX39A-220ENST00000593008 IGKV4-1P06312 121 aa5.3□□□□□ -1.56
DDX39A-220ENST00000593008 A0A0U1RQV1 116 aa5.29□□□□□ -1.56
DDX39A-220ENST00000593008 J3KT08 172 aa5.29□□□□□ -1.56
DDX39A-220ENST00000593008 Q6ZVQ6 151 aa5.29□□□□□ -1.56
DDX39A-220ENST00000593008 NOTCH2NLQ7Z3S9 236 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms