RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 SCGB1C2P0DMR2 95 aa13.09□□□□□ -0.31
R3HDM4-205ENST00000589445 Q8N377 158 aa13.09□□□□□ -0.31
R3HDM4-205ENST00000589445 DNAL4O96015 105 aa13.07□□□□□ -0.32
R3HDM4-205ENST00000589445 A0A1B0GX51 115 aa13.06□□□□□ -0.32
R3HDM4-205ENST00000589445 F8WEM9 126 aa13.06□□□□□ -0.32
R3HDM4-205ENST00000589445 SMIM29Q86T20 159 aa13.05□□□□□ -0.32
R3HDM4-205ENST00000589445 PCP4L1A6NKN8 68 aa13.04□□□□□ -0.32
R3HDM4-205ENST00000589445 C4orf48Q5BLP8 95 aa13.04□□□□□ -0.32
R3HDM4-205ENST00000589445 SSBP3-AS1Q7Z2R9 100 aa13.03□□□□□ -0.32
R3HDM4-205ENST00000589445 OCIAD2Q56VL3 154 aa13.01□□□□□ -0.33
R3HDM4-205ENST00000589445 PPDPFLQ8WWR9 84 aa13.01□□□□□ -0.33
R3HDM4-205ENST00000589445 SPAG11AQ6PDA7 123 aa12.99□□□□□ -0.33
R3HDM4-205ENST00000589445 SNHG12Q9BXW3 62 aa12.99□□□□□ -0.33
R3HDM4-205ENST00000589445 RNF213Q63HN8 5207 aa12.99□□□□□ -0.33
R3HDM4-205ENST00000589445 H3BUT2 72 aa12.97□□□□□ -0.33
R3HDM4-205ENST00000589445 LST1O00453 97 aa12.97□□□□□ -0.33
R3HDM4-205ENST00000589445 FABP2P12104 132 aa12.97□□□□□ -0.33
R3HDM4-205ENST00000589445 LYRM7Q5U5X0 104 aa12.97□□□□□ -0.33
R3HDM4-205ENST00000589445 ORMDL1Q9P0S3 153 aa12.97□□□□□ -0.33
R3HDM4-205ENST00000589445 GHRHP01286 108 aa12.96□□□□□ -0.33
R3HDM4-205ENST00000589445 HRCT1Q6UXD1 115 aa12.95□□□□□ -0.34
R3HDM4-205ENST00000589445 TRACP01848 142 aa12.94□□□□□ -0.34
R3HDM4-205ENST00000589445 TAX1BP3O14907 124 aa12.93□□□□□ -0.34
R3HDM4-205ENST00000589445 A0A0G2JQZ4 141 aa12.92□□□□□ -0.34
R3HDM4-205ENST00000589445 TCL1BO95988 128 aa12.92□□□□□ -0.34
R3HDM4-205ENST00000589445 SPINK1P00995 79 aa12.92□□□□□ -0.34
R3HDM4-205ENST00000589445 ATXN8Q156A1 80 aa12.92□□□□□ -0.34
R3HDM4-205ENST00000589445 C9orf118A6NHY6 69 aa12.91□□□□□ -0.34
R3HDM4-205ENST00000589445 NDUFV3P56181 108 aaKnown RBP12.9□□□□□ -0.34
R3HDM4-205ENST00000589445 RETNLBQ9BQ08 111 aa12.9□□□□□ -0.34
R3HDM4-205ENST00000589445 A0A1B0GV72 72 aa12.89□□□□□ -0.35
R3HDM4-205ENST00000589445 PRR4Q16378 134 aa12.88□□□□□ -0.35
R3HDM4-205ENST00000589445 COL5A1-AS1Q5SY13 56 aa12.88□□□□□ -0.35
R3HDM4-205ENST00000589445 H3BQ85 93 aa12.86□□□□□ -0.35
R3HDM4-205ENST00000589445 Q6JHZ5 121 aa12.86□□□□□ -0.35
R3HDM4-205ENST00000589445 IGLV8-61A0A075B6I0 122 aa12.85□□□□□ -0.35
R3HDM4-205ENST00000589445 A0A1W2PPM0 123 aa12.85□□□□□ -0.35
R3HDM4-205ENST00000589445 TMEM256-PLSCR3K7ERE1 68 aa12.84□□□□□ -0.35
R3HDM4-205ENST00000589445 LRP2P98164 4655 aa12.84□□□□□ -0.35
R3HDM4-205ENST00000589445 IGFL1Q6UW32 110 aa12.84□□□□□ -0.35
R3HDM4-205ENST00000589445 H3BMG7 143 aa12.83□□□□□ -0.36
R3HDM4-205ENST00000589445 RPS29P62273 56 aaKnown RBP12.83□□□□□ -0.36
R3HDM4-205ENST00000589445 TRBV20-1A0A075B6N2 111 aa12.82□□□□□ -0.36
R3HDM4-205ENST00000589445 CD164Q04900 197 aa12.82□□□□□ -0.36
R3HDM4-205ENST00000589445 LIMD2Q9BT23 127 aa12.82□□□□□ -0.36
R3HDM4-205ENST00000589445 BAALC-AS2P0C853 105 aa12.78□□□□□ -0.36
R3HDM4-205ENST00000589445 C9JAW5 83 aa12.77□□□□□ -0.37
R3HDM4-205ENST00000589445 UBE2V1Q13404 147 aa12.77□□□□□ -0.37
R3HDM4-205ENST00000589445 ANKRD29Q8N6D5 301 aa12.76□□□□□ -0.37
R3HDM4-205ENST00000589445 SPCS1Q9Y6A9 102 aa12.75□□□□□ -0.37
R3HDM4-205ENST00000589445 MTURNQ8N3F0 131 aa12.72□□□□□ -0.37
R3HDM4-205ENST00000589445 TRBV7-7A0A0K0K1E9 115 aa12.71□□□□□ -0.37
R3HDM4-205ENST00000589445 IGLV7-46A0A075B6I9 117 aa12.69□□□□□ -0.38
R3HDM4-205ENST00000589445 FP248Q71RG6 208 aaPredicted RBP12.68□□□□□ -0.38
R3HDM4-205ENST00000589445 RBM3P98179 157 aaKnown RBP12.65□□□□□ -0.38
R3HDM4-205ENST00000589445 TEN1Q86WV5 123 aa12.65□□□□□ -0.38
R3HDM4-205ENST00000589445 DSCR8Q96T75 97 aa12.65□□□□□ -0.38
R3HDM4-205ENST00000589445 LPAP08519 4548 aa12.63□□□□□ -0.39
R3HDM4-205ENST00000589445 Q5XG85 94 aa12.63□□□□□ -0.39
R3HDM4-205ENST00000589445 Q6Q795 121 aa12.63□□□□□ -0.39
R3HDM4-205ENST00000589445 VPS25Q9BRG1 176 aa12.63□□□□□ -0.39
R3HDM4-205ENST00000589445 A0A1W2PNM2 257 aa12.62□□□□□ -0.39
R3HDM4-205ENST00000589445 H3BT86 120 aa12.62□□□□□ -0.39
R3HDM4-205ENST00000589445 K7EP34 96 aa12.62□□□□□ -0.39
R3HDM4-205ENST00000589445 CCKP06307 115 aa12.62□□□□□ -0.39
R3HDM4-205ENST00000589445 A0A087WSZ3 146 aa12.61□□□□□ -0.39
R3HDM4-205ENST00000589445 TRBV7-4A0A0J9YYF1 115 aa12.6□□□□□ -0.39
R3HDM4-205ENST00000589445 SS18L2Q9UHA2 77 aa12.6□□□□□ -0.39
R3HDM4-205ENST00000589445 JMJD7-PLA2G4BH0Y9G9 81 aa12.59□□□□□ -0.39
R3HDM4-205ENST00000589445 C1orf195Q5TG92 126 aa12.57□□□□□ -0.4
R3HDM4-205ENST00000589445 KRTAP9-2Q9BYQ4 174 aa12.57□□□□□ -0.4
R3HDM4-205ENST00000589445 TPRXLQ17RH7 258 aa12.55□□□□□ -0.4
R3HDM4-205ENST00000589445 C14orf132Q9NPU4 83 aa12.55□□□□□ -0.4
R3HDM4-205ENST00000589445 GTF2H5Q6ZYL4 71 aa12.54□□□□□ -0.4
R3HDM4-205ENST00000589445 ASB16-AS1Q495Z4 193 aa12.53□□□□□ -0.4
R3HDM4-205ENST00000589445 CDIP1Q9H305 208 aa12.52□□□□□ -0.41
R3HDM4-205ENST00000589445 KRTAP13-3Q3SY46 172 aa12.5□□□□□ -0.41
R3HDM4-205ENST00000589445 LOC110117498A0A087WWA1 95 aa12.49□□□□□ -0.41
R3HDM4-205ENST00000589445 Q6ZQT0 140 aa12.49□□□□□ -0.41
R3HDM4-205ENST00000589445 OBSCN-AS1Q96MR7 158 aa12.48□□□□□ -0.41
R3HDM4-205ENST00000589445 SMCPP49901 116 aaPredicted RBP12.47□□□□□ -0.41
R3HDM4-205ENST00000589445 PRO0461Q9UI25 63 aa12.46□□□□□ -0.41
R3HDM4-205ENST00000589445 PDE6GP18545 87 aa12.45□□□□□ -0.42
R3HDM4-205ENST00000589445 KRTAP9-6A0A140TA67 174 aa12.44□□□□□ -0.42
R3HDM4-205ENST00000589445 C9orf92A6NGG3 77 aa12.44□□□□□ -0.42
R3HDM4-205ENST00000589445 SIGMAR1Q99720 223 aa12.43□□□□□ -0.42
R3HDM4-205ENST00000589445 Q96NJ1 140 aa12.39□□□□□ -0.43
R3HDM4-205ENST00000589445 C21orf62-AS1Q17RA5 79 aa12.38□□□□□ -0.43
R3HDM4-205ENST00000589445 IGKV4-1P06312 121 aa12.35□□□□□ -0.43
R3HDM4-205ENST00000589445 DEFB116Q30KQ4 102 aa12.35□□□□□ -0.43
R3HDM4-205ENST00000589445 F8W1H4 67 aa12.34□□□□□ -0.43
R3HDM4-205ENST00000589445 XP32Q5T750 250 aa12.32□□□□□ -0.44
R3HDM4-205ENST00000589445 A0A1B0GV90 55 aa12.31□□□□□ -0.44
R3HDM4-205ENST00000589445 A0A1B0GW54 56 aa12.31□□□□□ -0.44
R3HDM4-205ENST00000589445 LINC00472Q9H8W2 130 aa12.3□□□□□ -0.44
R3HDM4-205ENST00000589445 ETDBQ3ZM63 59 aa12.27□□□□□ -0.45
R3HDM4-205ENST00000589445 A0A0U1RQV1 116 aa12.23□□□□□ -0.45
R3HDM4-205ENST00000589445 J3KT08 172 aa12.22□□□□□ -0.45
R3HDM4-205ENST00000589445 NREPQ16612 68 aa12.22□□□□□ -0.45
R3HDM4-205ENST00000589445 DSCR10P59022 87 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 181.6 ms