RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-209ENST00000578709 RPS29P62273 56 aaKnown RBP13.59□□□□□ -0.23
ERBB2-209ENST00000578709 A0A1B0GX51 115 aa13.58□□□□□ -0.24
ERBB2-209ENST00000578709 PPDPFLQ8WWR9 84 aa13.58□□□□□ -0.24
ERBB2-209ENST00000578709 PRR4Q16378 134 aa13.57□□□□□ -0.24
ERBB2-209ENST00000578709 LRP2P98164 4655 aa13.56□□□□□ -0.24
ERBB2-209ENST00000578709 PSMB2P49721 201 aa13.56□□□□□ -0.24
ERBB2-209ENST00000578709 OCIAD2Q56VL3 154 aa13.55□□□□□ -0.24
ERBB2-209ENST00000578709 RETNLBQ9BQ08 111 aa13.54□□□□□ -0.24
ERBB2-209ENST00000578709 COX6CP09669 75 aa13.53□□□□□ -0.24
ERBB2-209ENST00000578709 CLEC2BQ92478 149 aa13.52□□□□□ -0.25
ERBB2-209ENST00000578709 F8WEM9 126 aa13.51□□□□□ -0.25
ERBB2-209ENST00000578709 CD164Q04900 197 aa13.5□□□□□ -0.25
ERBB2-209ENST00000578709 IGLV8-61A0A075B6I0 122 aa13.49□□□□□ -0.25
ERBB2-209ENST00000578709 SNHG12Q9BXW3 62 aa13.47□□□□□ -0.25
ERBB2-209ENST00000578709 GHRHP01286 108 aa13.45□□□□□ -0.26
ERBB2-209ENST00000578709 HRCT1Q6UXD1 115 aa13.45□□□□□ -0.26
ERBB2-209ENST00000578709 A0A0G2JQZ4 141 aa13.44□□□□□ -0.26
ERBB2-209ENST00000578709 Q6JHZ5 121 aa13.44□□□□□ -0.26
ERBB2-209ENST00000578709 FP248Q71RG6 208 aaPredicted RBP13.44□□□□□ -0.26
ERBB2-209ENST00000578709 LPAP08519 4548 aa13.43□□□□□ -0.26
ERBB2-209ENST00000578709 UBR4Q5T4S7 5183 aa13.42□□□□□ -0.26
ERBB2-209ENST00000578709 SCGB1C2P0DMR2 95 aa13.42□□□□□ -0.26
ERBB2-209ENST00000578709 IGLV7-46A0A075B6I9 117 aa13.41□□□□□ -0.26
ERBB2-209ENST00000578709 DNAL4O96015 105 aa13.41□□□□□ -0.26
ERBB2-209ENST00000578709 LIMD2Q9BT23 127 aa13.41□□□□□ -0.26
ERBB2-209ENST00000578709 NDUFV3P56181 108 aaKnown RBP13.39□□□□□ -0.27
ERBB2-209ENST00000578709 H3BQ85 93 aa13.38□□□□□ -0.27
ERBB2-209ENST00000578709 LST1O00453 97 aa13.38□□□□□ -0.27
ERBB2-209ENST00000578709 TRACP01848 142 aa13.38□□□□□ -0.27
ERBB2-209ENST00000578709 IGFL1Q6UW32 110 aa13.38□□□□□ -0.27
ERBB2-209ENST00000578709 ORMDL1Q9P0S3 153 aa13.38□□□□□ -0.27
ERBB2-209ENST00000578709 BATFQ16520 125 aa13.37□□□□□ -0.27
ERBB2-209ENST00000578709 Q5XG85 94 aa13.37□□□□□ -0.27
ERBB2-209ENST00000578709 H3BUT2 72 aa13.36□□□□□ -0.27
ERBB2-209ENST00000578709 FABP2P12104 132 aa13.36□□□□□ -0.27
ERBB2-209ENST00000578709 TPRXLQ17RH7 258 aa13.35□□□□□ -0.27
ERBB2-209ENST00000578709 NAA38Q9BRA0 125 aaKnown RBP13.34□□□□□ -0.27
ERBB2-209ENST00000578709 TMEM256-PLSCR3K7ERE1 68 aa13.31□□□□□ -0.28
ERBB2-209ENST00000578709 H3BMG7 143 aa13.3□□□□□ -0.28
ERBB2-209ENST00000578709 TRBV7-7A0A0K0K1E9 115 aa13.28□□□□□ -0.28
ERBB2-209ENST00000578709 TCL1BO95988 128 aa13.27□□□□□ -0.29
ERBB2-209ENST00000578709 ATXN8Q156A1 80 aa13.26□□□□□ -0.29
ERBB2-209ENST00000578709 UBE2V1Q13404 147 aa13.25□□□□□ -0.29
ERBB2-209ENST00000578709 KRTAP13-3Q3SY46 172 aa13.25□□□□□ -0.29
ERBB2-209ENST00000578709 LYRM7Q5U5X0 104 aa13.25□□□□□ -0.29
ERBB2-209ENST00000578709 Q6Q795 121 aa13.25□□□□□ -0.29
ERBB2-209ENST00000578709 TAX1BP3O14907 124 aa13.23□□□□□ -0.29
ERBB2-209ENST00000578709 C9orf118A6NHY6 69 aa13.22□□□□□ -0.29
ERBB2-209ENST00000578709 C1orf195Q5TG92 126 aa13.22□□□□□ -0.29
ERBB2-209ENST00000578709 ASB16-AS1Q495Z4 193 aa13.21□□□□□ -0.29
ERBB2-209ENST00000578709 CDIP1Q9H305 208 aa13.21□□□□□ -0.29
ERBB2-209ENST00000578709 TEN1Q86WV5 123 aa13.2□□□□□ -0.3
ERBB2-209ENST00000578709 TRBV20-1A0A075B6N2 111 aa13.19□□□□□ -0.3
ERBB2-209ENST00000578709 BAALC-AS2P0C853 105 aa13.19□□□□□ -0.3
ERBB2-209ENST00000578709 ANKRD29Q8N6D5 301 aa13.16□□□□□ -0.3
ERBB2-209ENST00000578709 A0A1B0GV72 72 aa13.14□□□□□ -0.31
ERBB2-209ENST00000578709 A0A1W2PNM2 257 aa13.14□□□□□ -0.31
ERBB2-209ENST00000578709 A0A1W2PPM0 123 aa13.13□□□□□ -0.31
ERBB2-209ENST00000578709 SS18L2Q9UHA2 77 aa13.11□□□□□ -0.31
ERBB2-209ENST00000578709 RNF213Q63HN8 5207 aa13.11□□□□□ -0.31
ERBB2-209ENST00000578709 TRBV7-4A0A0J9YYF1 115 aa13.09□□□□□ -0.31
ERBB2-209ENST00000578709 RBM3P98179 157 aaKnown RBP13.09□□□□□ -0.31
ERBB2-209ENST00000578709 COL5A1-AS1Q5SY13 56 aa13.09□□□□□ -0.31
ERBB2-209ENST00000578709 A0A087WSZ3 146 aa13.08□□□□□ -0.32
ERBB2-209ENST00000578709 C9JAW5 83 aa13.06□□□□□ -0.32
ERBB2-209ENST00000578709 CCKP06307 115 aa13.05□□□□□ -0.32
ERBB2-209ENST00000578709 PCP4L1A6NKN8 68 aa13.04□□□□□ -0.32
ERBB2-209ENST00000578709 DSCR8Q96T75 97 aa13.04□□□□□ -0.32
ERBB2-209ENST00000578709 XP32Q5T750 250 aa13.02□□□□□ -0.33
ERBB2-209ENST00000578709 JMJD7-PLA2G4BH0Y9G9 81 aa13.01□□□□□ -0.33
ERBB2-209ENST00000578709 C9orf92A6NGG3 77 aa12.99□□□□□ -0.33
ERBB2-209ENST00000578709 SPCS1Q9Y6A9 102 aa12.98□□□□□ -0.33
ERBB2-209ENST00000578709 MUC17Q685J3 4493 aa12.98□□□□□ -0.33
ERBB2-209ENST00000578709 H3BT86 120 aa12.97□□□□□ -0.33
ERBB2-209ENST00000578709 Q96NJ1 140 aa12.97□□□□□ -0.33
ERBB2-209ENST00000578709 OBSCN-AS1Q96MR7 158 aa12.96□□□□□ -0.33
ERBB2-209ENST00000578709 LOC110117498A0A087WWA1 95 aa12.94□□□□□ -0.34
ERBB2-209ENST00000578709 VPS25Q9BRG1 176 aa12.94□□□□□ -0.34
ERBB2-209ENST00000578709 Q6ZQT0 140 aa12.93□□□□□ -0.34
ERBB2-209ENST00000578709 PDE6GP18545 87 aa12.91□□□□□ -0.34
ERBB2-209ENST00000578709 MTURNQ8N3F0 131 aa12.91□□□□□ -0.34
ERBB2-209ENST00000578709 SEC61BP60468 96 aaKnown RBP12.9□□□□□ -0.34
ERBB2-209ENST00000578709 C21orf62-AS1Q17RA5 79 aa12.89□□□□□ -0.35
ERBB2-209ENST00000578709 C14orf132Q9NPU4 83 aa12.89□□□□□ -0.35
ERBB2-209ENST00000578709 LINC00472Q9H8W2 130 aa12.87□□□□□ -0.35
ERBB2-209ENST00000578709 MUC2Q02817 5179 aa12.86□□□□□ -0.35
ERBB2-209ENST00000578709 A0A1B0GW54 56 aa12.85□□□□□ -0.35
ERBB2-209ENST00000578709 K7EP34 96 aa12.85□□□□□ -0.35
ERBB2-209ENST00000578709 IGKV4-1P06312 121 aa12.81□□□□□ -0.36
ERBB2-209ENST00000578709 SMCPP49901 116 aaPredicted RBP12.81□□□□□ -0.36
ERBB2-209ENST00000578709 SIGMAR1Q99720 223 aa12.81□□□□□ -0.36
ERBB2-209ENST00000578709 PRO0461Q9UI25 63 aa12.79□□□□□ -0.36
ERBB2-209ENST00000578709 RPL37P61927 97 aaKnown RBP12.77□□□□□ -0.37
ERBB2-209ENST00000578709 DEFB116Q30KQ4 102 aa12.77□□□□□ -0.37
ERBB2-209ENST00000578709 GTF2H5Q6ZYL4 71 aa12.75□□□□□ -0.37
ERBB2-209ENST00000578709 PCOTHQ58A44 107 aa12.73□□□□□ -0.37
ERBB2-209ENST00000578709 KRTAP4-1Q9BYQ7 146 aa12.72□□□□□ -0.37
ERBB2-209ENST00000578709 J3KT08 172 aa12.7□□□□□ -0.38
ERBB2-209ENST00000578709 Q75L30 129 aa12.7□□□□□ -0.38
ERBB2-209ENST00000578709 DSCR10P59022 87 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms