RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 HECTD1Q9ULT8 2610 aa2.84□□□□□ -1.95
NF1-218ENST00000577967 MYO9AB2RTY4 2548 aa2.84□□□□□ -1.95
NF1-218ENST00000577967 USP9YO00507 2555 aaPredicted RBP2.84□□□□□ -1.95
NF1-218ENST00000577967 ZZEF1O43149 2961 aa2.84□□□□□ -1.95
NF1-218ENST00000577967 F8P00451 2351 aa2.84□□□□□ -1.96
NF1-218ENST00000577967 ANK3Q12955 4377 aaKnown RBP2.83□□□□□ -1.96
NF1-218ENST00000577967 MUC3AQ02505 3323 aa2.83□□□□□ -1.96
NF1-218ENST00000577967 A0A1B0GU69 56 aa2.83□□□□□ -1.96
NF1-218ENST00000577967 COA5Q86WW8 74 aa2.83□□□□□ -1.96
NF1-218ENST00000577967 LCE6AA0A183 80 aa2.83□□□□□ -1.96
NF1-218ENST00000577967 HRNRQ86YZ3 2850 aaPredicted RBP2.83□□□□□ -1.96
NF1-218ENST00000577967 CSMD1Q96PZ7 3565 aa2.82□□□□□ -1.96
NF1-218ENST00000577967 Q6ZR54 194 aa2.82□□□□□ -1.96
NF1-218ENST00000577967 JMJD1CQ15652 2540 aa2.82□□□□□ -1.96
NF1-218ENST00000577967 C2CD3Q4AC94 2353 aa2.82□□□□□ -1.96
NF1-218ENST00000577967 IGLV8-61A0A075B6I0 122 aa2.82□□□□□ -1.96
NF1-218ENST00000577967 CD164Q04900 197 aa2.82□□□□□ -1.96
NF1-218ENST00000577967 KRTAP11-1Q8IUC1 163 aa2.82□□□□□ -1.96
NF1-218ENST00000577967 EPG5Q9HCE0 2579 aa2.81□□□□□ -1.96
NF1-218ENST00000577967 ADGRG4Q8IZF6 3080 aa2.81□□□□□ -1.96
NF1-218ENST00000577967 H7BZZ5 65 aa2.8□□□□□ -1.96
NF1-218ENST00000577967 KRTAP7-1Q8IUC3 87 aa2.8□□□□□ -1.96
NF1-218ENST00000577967 CFAP47Q6ZTR5 3102 aa2.8□□□□□ -1.96
NF1-218ENST00000577967 KLKP1Q107X0 134 aa2.8□□□□□ -1.96
NF1-218ENST00000577967 Q6ZRN7 208 aaPredicted RBP2.8□□□□□ -1.96
NF1-218ENST00000577967 MTORP42345 2549 aa2.8□□□□□ -1.96
NF1-218ENST00000577967 KRTAP4-16G5E9R7 235 aaPredicted RBP2.8□□□□□ -1.96
NF1-218ENST00000577967 RPS28P62857 69 aaKnown RBP2.8□□□□□ -1.96
NF1-218ENST00000577967 FAM229BQ4G0N7 80 aa2.8□□□□□ -1.96
NF1-218ENST00000577967 Q5VSD8 79 aa2.8□□□□□ -1.96
NF1-218ENST00000577967 Q8N1X5 172 aa2.79□□□□□ -1.96
NF1-218ENST00000577967 C1orf195Q5TG92 126 aa2.79□□□□□ -1.96
NF1-218ENST00000577967 OCR1Q9BZK8 76 aa2.79□□□□□ -1.96
NF1-218ENST00000577967 UTP20O75691 2785 aaKnown RBP2.79□□□□□ -1.96
NF1-218ENST00000577967 NBPF19A0A087WUL8 3843 aa2.79□□□□□ -1.96
NF1-218ENST00000577967 CFAP46Q8IYW2 2715 aa2.79□□□□□ -1.96
NF1-218ENST00000577967 KALRNO60229 2985 aa2.79□□□□□ -1.96
NF1-218ENST00000577967 SPRR1BP22528 89 aa2.79□□□□□ -1.96
NF1-218ENST00000577967 LINC00483Q53H64 154 aa2.79□□□□□ -1.96
NF1-218ENST00000577967 MMP24-AS1A0A0U1RRL7 71 aa2.78□□□□□ -1.96
NF1-218ENST00000577967 PMAIP1Q13794 54 aa2.78□□□□□ -1.96
NF1-218ENST00000577967 HELZ2Q9BYK8 2649 aaKnown RBP2.77□□□□□ -1.97
NF1-218ENST00000577967 ZFHX3Q15911 3703 aa2.77□□□□□ -1.97
NF1-218ENST00000577967 TEX15Q9BXT5 2789 aa2.77□□□□□ -1.97
NF1-218ENST00000577967 IGLV7-46A0A075B6I9 117 aa2.77□□□□□ -1.97
NF1-218ENST00000577967 LINC00472Q9H8W2 130 aa2.77□□□□□ -1.97
NF1-218ENST00000577967 SETD2Q9BYW2 2564 aaPredicted RBP2.76□□□□□ -1.97
NF1-218ENST00000577967 A8MUN3 132 aa2.76□□□□□ -1.97
NF1-218ENST00000577967 COX6B2Q6YFQ2 88 aa2.76□□□□□ -1.97
NF1-218ENST00000577967 CYSTM1Q9H1C7 97 aa2.76□□□□□ -1.97
NF1-218ENST00000577967 NBEAQ8NFP9 2946 aa2.76□□□□□ -1.97
NF1-218ENST00000577967 COL12A1Q99715 3063 aa2.75□□□□□ -1.97
NF1-218ENST00000577967 AKAP9Q99996 3911 aa2.75□□□□□ -1.97
NF1-218ENST00000577967 A0A087X002 238 aa2.75□□□□□ -1.97
NF1-218ENST00000577967 SVEP1Q4LDE5 3571 aa2.74□□□□□ -1.97
NF1-218ENST00000577967 UBR5O95071 2799 aaPredicted RBP2.74□□□□□ -1.97
NF1-218ENST00000577967 SPANXA2-OT1Q8N9U9 137 aa2.74□□□□□ -1.97
NF1-218ENST00000577967 HRES1P13985 223 aa2.73□□□□□ -1.97
NF1-218ENST00000577967 CHD6Q8TD26 2715 aa2.73□□□□□ -1.97
NF1-218ENST00000577967 FBN2P35556 2912 aa2.73□□□□□ -1.97
NF1-218ENST00000577967 ZCCHC13Q8WW36 166 aaKnown RBP2.73□□□□□ -1.97
NF1-218ENST00000577967 RBM12B-AS1Q9P1G2 102 aa2.73□□□□□ -1.97
NF1-218ENST00000577967 VPS13CQ709C8 3753 aa2.73□□□□□ -1.97
NF1-218ENST00000577967 KRTAP21-3Q3LHN1 58 aa2.73□□□□□ -1.97
NF1-218ENST00000577967 Q8N9P0 234 aaPredicted RBP2.73□□□□□ -1.97
NF1-218ENST00000577967 ITPR1Q14643 2758 aa2.73□□□□□ -1.97
NF1-218ENST00000577967 LCE2DQ5TA82 110 aaPredicted RBP2.72□□□□□ -1.97
NF1-218ENST00000577967 Q5W150 140 aa2.72□□□□□ -1.97
NF1-218ENST00000577967 PRO0628Q9UI54 55 aa2.72□□□□□ -1.97
NF1-218ENST00000577967 Q6ZSA8 131 aa2.72□□□□□ -1.97
NF1-218ENST00000577967 CYP4F30PQ9H0H9 118 aa2.72□□□□□ -1.97
NF1-218ENST00000577967 TACC2O95359 2948 aa2.71□□□□□ -1.98
NF1-218ENST00000577967 APCP25054 2843 aa2.7□□□□□ -1.98
NF1-218ENST00000577967 KRTAP13-1Q8IUC0 172 aa2.7□□□□□ -1.98
NF1-218ENST00000577967 NOTCH2NLQ7Z3S9 236 aa2.7□□□□□ -1.98
NF1-218ENST00000577967 MIR22HGQ0VDD5 57 aa2.7□□□□□ -1.98
NF1-218ENST00000577967 ATRQ13535 2644 aa2.7□□□□□ -1.98
NF1-218ENST00000577967 CSMD2Q7Z408 3487 aa2.69□□□□□ -1.98
NF1-218ENST00000577967 KRTAP13-2Q52LG2 175 aa2.69□□□□□ -1.98
NF1-218ENST00000577967 DCHS2Q6V1P9 2916 aa2.69□□□□□ -1.98
NF1-218ENST00000577967 SETXQ7Z333 2677 aaKnown RBP2.69□□□□□ -1.98
NF1-218ENST00000577967 A0A0D9SG42 100 aa2.68□□□□□ -1.98
NF1-218ENST00000577967 UQCR11O14957 56 aa2.68□□□□□ -1.98
NF1-218ENST00000577967 UNC79Q9P2D8 2635 aa2.68□□□□□ -1.98
NF1-218ENST00000577967 CRYBG3Q68DQ2 2970 aa2.68□□□□□ -1.98
NF1-218ENST00000577967 S4R3F8 94 aa2.67□□□□□ -1.98
NF1-218ENST00000577967 CENPEQ02224 2701 aa2.67□□□□□ -1.98
NF1-218ENST00000577967 TEP1Q99973 2627 aaKnown RBP2.67□□□□□ -1.98
NF1-218ENST00000577967 KMT2BQ9UMN6 2715 aaPredicted RBP2.67□□□□□ -1.98
NF1-218ENST00000577967 KRTAP29-1A8MX34 341 aaPredicted RBP2.67□□□□□ -1.98
NF1-218ENST00000577967 PDZD2O15018 2839 aa2.67□□□□□ -1.98
NF1-218ENST00000577967 Q1T7F1 81 aa2.67□□□□□ -1.98
NF1-218ENST00000577967 CELSR2Q9HCU4 2923 aa2.67□□□□□ -1.98
NF1-218ENST00000577967 SPINK7P58062 85 aa2.66□□□□□ -1.98
NF1-218ENST00000577967 LINC01554Q52M75 96 aa2.66□□□□□ -1.98
NF1-218ENST00000577967 FLNCQ14315 2725 aa2.66□□□□□ -1.98
NF1-218ENST00000577967 GCN1Q92616 2671 aaKnown RBP2.66□□□□□ -1.98
NF1-218ENST00000577967 ITPR2Q14571 2701 aa2.66□□□□□ -1.98
NF1-218ENST00000577967 Q5XG85 94 aa2.65□□□□□ -1.99
NF1-218ENST00000577967 HUWE1Q7Z6Z7 4374 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms