RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 SMIM29Q86T20 159 aa9.88□□□□□ -0.83
CLDN7-207ENST00000574070 F8WEM9 126 aa9.87□□□□□ -0.83
CLDN7-207ENST00000574070 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.87□□□□□ -0.83
CLDN7-207ENST00000574070 KRTAP9-2Q9BYQ4 174 aa9.87□□□□□ -0.83
CLDN7-207ENST00000574070 PSMB2P49721 201 aa9.85□□□□□ -0.83
CLDN7-207ENST00000574070 LPAP08519 4548 aa9.84□□□□□ -0.83
CLDN7-207ENST00000574070 IGLV7-46A0A075B6I9 117 aa9.84□□□□□ -0.83
CLDN7-207ENST00000574070 RPS29P62273 56 aaKnown RBP9.84□□□□□ -0.83
CLDN7-207ENST00000574070 TRIAP1O43715 76 aa9.82□□□□□ -0.84
CLDN7-207ENST00000574070 FAM218AQ96MZ4 157 aa9.82□□□□□ -0.84
CLDN7-207ENST00000574070 A0A0U1RQV1 116 aa9.81□□□□□ -0.84
CLDN7-207ENST00000574070 LOC105371267A0A1B0GV96 52 aa9.81□□□□□ -0.84
CLDN7-207ENST00000574070 SNHG12Q9BXW3 62 aa9.81□□□□□ -0.84
CLDN7-207ENST00000574070 COX6CP09669 75 aa9.8□□□□□ -0.84
CLDN7-207ENST00000574070 FP248Q71RG6 208 aaPredicted RBP9.8□□□□□ -0.84
CLDN7-207ENST00000574070 PPDPFLQ8WWR9 84 aa9.8□□□□□ -0.84
CLDN7-207ENST00000574070 LIMD2Q9BT23 127 aa9.8□□□□□ -0.84
CLDN7-207ENST00000574070 OCIAD2Q56VL3 154 aa9.79□□□□□ -0.84
CLDN7-207ENST00000574070 A0A0G2JQZ4 141 aa9.78□□□□□ -0.84
CLDN7-207ENST00000574070 A0A1B0GX51 115 aa9.78□□□□□ -0.84
CLDN7-207ENST00000574070 TSTD3H0UI37 97 aa9.78□□□□□ -0.84
CLDN7-207ENST00000574070 M0R143 59 aa9.78□□□□□ -0.84
CLDN7-207ENST00000574070 CD164Q04900 197 aa9.78□□□□□ -0.84
CLDN7-207ENST00000574070 CLEC2BQ92478 149 aa9.78□□□□□ -0.84
CLDN7-207ENST00000574070 GHRHP01286 108 aa9.76□□□□□ -0.85
CLDN7-207ENST00000574070 DNAL4O96015 105 aa9.75□□□□□ -0.85
CLDN7-207ENST00000574070 SCGB1C2P0DMR2 95 aa9.75□□□□□ -0.85
CLDN7-207ENST00000574070 CDIP1Q9H305 208 aa9.75□□□□□ -0.85
CLDN7-207ENST00000574070 MUC2Q02817 5179 aa9.75□□□□□ -0.85
CLDN7-207ENST00000574070 Q6JHZ5 121 aa9.74□□□□□ -0.85
CLDN7-207ENST00000574070 KRTAP9-6A0A140TA67 174 aa9.73□□□□□ -0.85
CLDN7-207ENST00000574070 FABP2P12104 132 aa9.73□□□□□ -0.85
CLDN7-207ENST00000574070 TPRXLQ17RH7 258 aa9.73□□□□□ -0.85
CLDN7-207ENST00000574070 H3BUT2 72 aa9.71□□□□□ -0.86
CLDN7-207ENST00000574070 IGFL1Q6UW32 110 aa9.71□□□□□ -0.86
CLDN7-207ENST00000574070 IGLV8-61A0A075B6I0 122 aa9.7□□□□□ -0.86
CLDN7-207ENST00000574070 NDUFV3P56181 108 aaKnown RBP9.7□□□□□ -0.86
CLDN7-207ENST00000574070 FAT4Q6V0I7 4981 aa9.69□□□□□ -0.86
CLDN7-207ENST00000574070 ORMDL1Q9P0S3 153 aa9.69□□□□□ -0.86
CLDN7-207ENST00000574070 BATFQ16520 125 aa9.68□□□□□ -0.86
CLDN7-207ENST00000574070 TCL1BO95988 128 aa9.67□□□□□ -0.86
CLDN7-207ENST00000574070 H3BMG7 143 aa9.65□□□□□ -0.86
CLDN7-207ENST00000574070 H3BQ85 93 aa9.65□□□□□ -0.86
CLDN7-207ENST00000574070 Q5XG85 94 aa9.65□□□□□ -0.86
CLDN7-207ENST00000574070 KRTAP13-3Q3SY46 172 aa9.64□□□□□ -0.87
CLDN7-207ENST00000574070 TRBV7-7A0A0K0K1E9 115 aa9.63□□□□□ -0.87
CLDN7-207ENST00000574070 NAA38Q9BRA0 125 aaKnown RBP9.63□□□□□ -0.87
CLDN7-207ENST00000574070 TMEM256-PLSCR3K7ERE1 68 aa9.62□□□□□ -0.87
CLDN7-207ENST00000574070 LST1O00453 97 aa9.62□□□□□ -0.87
CLDN7-207ENST00000574070 TRACP01848 142 aa9.62□□□□□ -0.87
CLDN7-207ENST00000574070 A0A1B0GV72 72 aa9.61□□□□□ -0.87
CLDN7-207ENST00000574070 C1orf195Q5TG92 126 aa9.6□□□□□ -0.87
CLDN7-207ENST00000574070 ATXN8Q156A1 80 aa9.57□□□□□ -0.88
CLDN7-207ENST00000574070 TEN1Q86WV5 123 aa9.57□□□□□ -0.88
CLDN7-207ENST00000574070 MUC17Q685J3 4493 aa9.56□□□□□ -0.88
CLDN7-207ENST00000574070 ANKRD29Q8N6D5 301 aa9.56□□□□□ -0.88
CLDN7-207ENST00000574070 C9orf92A6NGG3 77 aa9.55□□□□□ -0.88
CLDN7-207ENST00000574070 UBE2V1Q13404 147 aa9.55□□□□□ -0.88
CLDN7-207ENST00000574070 LYRM7Q5U5X0 104 aa9.55□□□□□ -0.88
CLDN7-207ENST00000574070 LCE2AQ5TA79 106 aaPredicted RBP9.54□□□□□ -0.88
CLDN7-207ENST00000574070 Q6Q795 121 aa9.54□□□□□ -0.88
CLDN7-207ENST00000574070 SS18L2Q9UHA2 77 aa9.54□□□□□ -0.88
CLDN7-207ENST00000574070 BAALC-AS2P0C853 105 aa9.53□□□□□ -0.88
CLDN7-207ENST00000574070 ASB16-AS1Q495Z4 193 aa9.53□□□□□ -0.88
CLDN7-207ENST00000574070 A0A087WSZ3 146 aa9.52□□□□□ -0.89
CLDN7-207ENST00000574070 XP32Q5T750 250 aa9.5□□□□□ -0.89
CLDN7-207ENST00000574070 A0A1W2PNM2 257 aa9.49□□□□□ -0.89
CLDN7-207ENST00000574070 RBM3P98179 157 aaKnown RBP9.48□□□□□ -0.89
CLDN7-207ENST00000574070 TRBV20-1A0A075B6N2 111 aa9.47□□□□□ -0.89
CLDN7-207ENST00000574070 C9orf118A6NHY6 69 aa9.47□□□□□ -0.89
CLDN7-207ENST00000574070 SEC61BP60468 96 aaKnown RBP9.47□□□□□ -0.89
CLDN7-207ENST00000574070 DSCR8Q96T75 97 aa9.47□□□□□ -0.89
CLDN7-207ENST00000574070 TAX1BP3O14907 124 aa9.46□□□□□ -0.9
CLDN7-207ENST00000574070 CCKP06307 115 aa9.46□□□□□ -0.9
CLDN7-207ENST00000574070 VPS25Q9BRG1 176 aa9.46□□□□□ -0.9
CLDN7-207ENST00000574070 TRBV7-4A0A0J9YYF1 115 aa9.45□□□□□ -0.9
CLDN7-207ENST00000574070 C9JAW5 83 aa9.43□□□□□ -0.9
CLDN7-207ENST00000574070 A0A1W2PPM0 123 aa9.42□□□□□ -0.9
CLDN7-207ENST00000574070 JMJD7-PLA2G4BH0Y9G9 81 aa9.4□□□□□ -0.9
CLDN7-207ENST00000574070 PCP4L1A6NKN8 68 aa9.37□□□□□ -0.91
CLDN7-207ENST00000574070 COL5A1-AS1Q5SY13 56 aa9.37□□□□□ -0.91
CLDN7-207ENST00000574070 SIGMAR1Q99720 223 aa9.37□□□□□ -0.91
CLDN7-207ENST00000574070 OBSCN-AS1Q96MR7 158 aa9.36□□□□□ -0.91
CLDN7-207ENST00000574070 Q96NJ1 140 aa9.36□□□□□ -0.91
CLDN7-207ENST00000574070 IGKV4-1P06312 121 aa9.34□□□□□ -0.91
CLDN7-207ENST00000574070 PCOTHQ58A44 107 aa9.34□□□□□ -0.91
CLDN7-207ENST00000574070 SPCS1Q9Y6A9 102 aa9.34□□□□□ -0.91
CLDN7-207ENST00000574070 MTURNQ8N3F0 131 aa9.33□□□□□ -0.92
CLDN7-207ENST00000574070 H3BT86 120 aa9.32□□□□□ -0.92
CLDN7-207ENST00000574070 RPL37P61927 97 aaKnown RBP9.32□□□□□ -0.92
CLDN7-207ENST00000574070 DEFB116Q30KQ4 102 aa9.32□□□□□ -0.92
CLDN7-207ENST00000574070 C14orf132Q9NPU4 83 aa9.32□□□□□ -0.92
CLDN7-207ENST00000574070 PDE6GP18545 87 aa9.31□□□□□ -0.92
CLDN7-207ENST00000574070 C21orf62-AS1Q17RA5 79 aa9.31□□□□□ -0.92
CLDN7-207ENST00000574070 LOC110117498A0A087WWA1 95 aa9.3□□□□□ -0.92
CLDN7-207ENST00000574070 Q6ZQT0 140 aa9.3□□□□□ -0.92
CLDN7-207ENST00000574070 LINC00472Q9H8W2 130 aa9.28□□□□□ -0.92
CLDN7-207ENST00000574070 DSCR10P59022 87 aa9.27□□□□□ -0.93
CLDN7-207ENST00000574070 KRTAP4-1Q9BYQ7 146 aa9.27□□□□□ -0.93
CLDN7-207ENST00000574070 KRTAP3-3Q9BYR6 98 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms