RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 ARHGAP5-AS1Q96IT6 56 aa1.65□□□□□ -2.15
TOPBP1-210ENST00000572787 PRLHP81277 87 aa1.64□□□□□ -2.15
TOPBP1-210ENST00000572787 RPL39P62891 51 aaKnown RBP1.62□□□□□ -2.15
TOPBP1-210ENST00000572787 DEFB109BQ30KR1 87 aa1.62□□□□□ -2.15
TOPBP1-210ENST00000572787 DEFB106AQ8N104 65 aa1.62□□□□□ -2.15
TOPBP1-210ENST00000572787 SPTBN2O15020 2390 aa1.62□□□□□ -2.15
TOPBP1-210ENST00000572787 PKDREJQ9NTG1 2253 aa1.61□□□□□ -2.15
TOPBP1-210ENST00000572787 MEGF8Q7Z7M0 2845 aa1.61□□□□□ -2.15
TOPBP1-210ENST00000572787 NOP10Q9NPE3 64 aaKnown RBP1.59□□□□□ -2.15
TOPBP1-210ENST00000572787 CACNA1HO95180 2353 aa1.59□□□□□ -2.16
TOPBP1-210ENST00000572787 TPRP12270 2363 aaKnown RBP1.59□□□□□ -2.16
TOPBP1-210ENST00000572787 RPL39LQ96EH5 51 aaKnown RBP1.58□□□□□ -2.16
TOPBP1-210ENST00000572787 SPTBN1Q01082 2364 aaKnown RBP1.56□□□□□ -2.16
TOPBP1-210ENST00000572787 PCNX1Q96RV3 2341 aa1.55□□□□□ -2.16
TOPBP1-210ENST00000572787 TTC28Q96AY4 2481 aa1.55□□□□□ -2.16
TOPBP1-210ENST00000572787 IGF2RP11717 2491 aa1.55□□□□□ -2.16
TOPBP1-210ENST00000572787 MUC6Q6W4X9 2439 aa1.54□□□□□ -2.16
TOPBP1-210ENST00000572787 PDE4DIPQ5VU43 2346 aa1.53□□□□□ -2.16
TOPBP1-210ENST00000572787 KNL1Q8NG31 2342 aa1.52□□□□□ -2.17
TOPBP1-210ENST00000572787 REV3LO60673 3130 aa1.51□□□□□ -2.17
TOPBP1-210ENST00000572787 ZNF292O60281 2723 aa1.5□□□□□ -2.17
TOPBP1-210ENST00000572787 LINC01590Q5TEZ4 76 aa1.5□□□□□ -2.17
TOPBP1-210ENST00000572787 TTTY10Q9BZA0 68 aa1.5□□□□□ -2.17
TOPBP1-210ENST00000572787 POLQO75417 2590 aa1.49□□□□□ -2.17
TOPBP1-210ENST00000572787 CLPSL2Q6UWE3 100 aa1.49□□□□□ -2.17
TOPBP1-210ENST00000572787 ABCA2Q9BZC7 2435 aa1.49□□□□□ -2.17
TOPBP1-210ENST00000572787 DSPP15924 2871 aaKnown RBP1.49□□□□□ -2.17
TOPBP1-210ENST00000572787 LEAP2Q969E1 77 aa1.48□□□□□ -2.17
TOPBP1-210ENST00000572787 H0YGG7 62 aa1.47□□□□□ -2.17
TOPBP1-210ENST00000572787 M0QY20 66 aa1.47□□□□□ -2.17
TOPBP1-210ENST00000572787 GVINP1Q7Z2Y8 2422 aa1.47□□□□□ -2.17
TOPBP1-210ENST00000572787 A8MTW9 85 aa1.46□□□□□ -2.18
TOPBP1-210ENST00000572787 ABCA12Q86UK0 2595 aa1.45□□□□□ -2.18
TOPBP1-210ENST00000572787 SPINK1P00995 79 aa1.45□□□□□ -2.18
TOPBP1-210ENST00000572787 TRANK1O15050 2925 aa1.45□□□□□ -2.18
TOPBP1-210ENST00000572787 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
TOPBP1-210ENST00000572787 SPINK6Q6UWN8 80 aa1.44□□□□□ -2.18
TOPBP1-210ENST00000572787 CSPG4Q6UVK1 2322 aa1.44□□□□□ -2.18
TOPBP1-210ENST00000572787 F8P00451 2351 aa1.43□□□□□ -2.18
TOPBP1-210ENST00000572787 PRCDQ00LT1 54 aa1.43□□□□□ -2.18
TOPBP1-210ENST00000572787 DEFB135Q30KP9 77 aa1.43□□□□□ -2.18
TOPBP1-210ENST00000572787 CHD9Q3L8U1 2897 aa1.42□□□□□ -2.18
TOPBP1-210ENST00000572787 TOMM7Q9P0U1 55 aa1.42□□□□□ -2.18
TOPBP1-210ENST00000572787 MUC19Q7Z5P9 8384 aa1.42□□□□□ -2.18
TOPBP1-210ENST00000572787 CELSR2Q9HCU4 2923 aa1.4□□□□□ -2.18
TOPBP1-210ENST00000572787 HELZ2Q9BYK8 2649 aaKnown RBP1.4□□□□□ -2.19
TOPBP1-210ENST00000572787 M0R2T5 61 aa1.39□□□□□ -2.19
TOPBP1-210ENST00000572787 SMR3AQ99954 134 aa1.39□□□□□ -2.19
TOPBP1-210ENST00000572787 TENM4Q6N022 2769 aa1.37□□□□□ -2.19
TOPBP1-210ENST00000572787 H3BSH0 61 aa1.36□□□□□ -2.19
TOPBP1-210ENST00000572787 M0QZ58 72 aa1.36□□□□□ -2.19
TOPBP1-210ENST00000572787 AKAP6Q13023 2319 aa1.34□□□□□ -2.19
TOPBP1-210ENST00000572787 PRRC2CQ9Y520 2896 aaKnown RBP1.32□□□□□ -2.2
TOPBP1-210ENST00000572787 KRTAP5-7Q6L8G8 165 aa1.32□□□□□ -2.2
TOPBP1-210ENST00000572787 A0A0C4DFX4 3053 aa1.31□□□□□ -2.2
TOPBP1-210ENST00000572787 U3KQA8 63 aa1.3□□□□□ -2.2
TOPBP1-210ENST00000572787 CEP290O15078 2479 aa1.3□□□□□ -2.2
TOPBP1-210ENST00000572787 BDP1A6H8Y1 2624 aa1.3□□□□□ -2.2
TOPBP1-210ENST00000572787 AKAP13Q12802 2813 aa1.3□□□□□ -2.2
TOPBP1-210ENST00000572787 PIEZO1Q92508 2521 aa1.29□□□□□ -2.2
TOPBP1-210ENST00000572787 VWFP04275 2813 aa1.29□□□□□ -2.2
TOPBP1-210ENST00000572787 KRTAP2-3P0C7H8 128 aa1.29□□□□□ -2.2
TOPBP1-210ENST00000572787 KRTAP2-4Q9BYR9 128 aa1.29□□□□□ -2.2
TOPBP1-210ENST00000572787 KRTAP2-1Q9BYU5 128 aa1.29□□□□□ -2.2
TOPBP1-210ENST00000572787 ATRQ13535 2644 aa1.28□□□□□ -2.2
TOPBP1-210ENST00000572787 C9orf92A6NGG3 77 aa1.28□□□□□ -2.2
TOPBP1-210ENST00000572787 PKD1L2Q7Z442 2459 aa1.28□□□□□ -2.2
TOPBP1-210ENST00000572787 HECTD1Q9ULT8 2610 aa1.28□□□□□ -2.2
TOPBP1-210ENST00000572787 K7EIM0 57 aa1.27□□□□□ -2.21
TOPBP1-210ENST00000572787 EP300Q09472 2414 aaPredicted RBP1.26□□□□□ -2.21
TOPBP1-210ENST00000572787 KRTAP19-3Q7Z4W3 81 aa1.25□□□□□ -2.21
TOPBP1-210ENST00000572787 CSMD3Q7Z407 3707 aa1.25□□□□□ -2.21
TOPBP1-210ENST00000572787 CHD6Q8TD26 2715 aa1.25□□□□□ -2.21
TOPBP1-210ENST00000572787 SPTA1P02549 2419 aa1.25□□□□□ -2.21
TOPBP1-210ENST00000572787 TNP1P09430 55 aa1.24□□□□□ -2.21
TOPBP1-210ENST00000572787 DEFB104AQ8WTQ1 72 aa1.24□□□□□ -2.21
TOPBP1-210ENST00000572787 TMEM167AQ8TBQ9 72 aa1.23□□□□□ -2.21
TOPBP1-210ENST00000572787 CELSR1Q9NYQ6 3014 aa1.21□□□□□ -2.22
TOPBP1-210ENST00000572787 FBN2P35556 2912 aa1.2□□□□□ -2.22
TOPBP1-210ENST00000572787 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
TOPBP1-210ENST00000572787 PRM1P04553 51 aa1.19□□□□□ -2.22
TOPBP1-210ENST00000572787 SRRM2Q9UQ35 2752 aaKnown RBP1.19□□□□□ -2.22
TOPBP1-210ENST00000572787 CREBBPQ92793 2442 aa1.19□□□□□ -2.22
TOPBP1-210ENST00000572787 OTOGQ6ZRI0 2925 aa1.18□□□□□ -2.22
TOPBP1-210ENST00000572787 TNXBP22105 4242 aa1.17□□□□□ -2.22
TOPBP1-210ENST00000572787 H3BNG1 76 aa1.17□□□□□ -2.22
TOPBP1-210ENST00000572787 TNRC18O15417 2968 aaPredicted RBP1.17□□□□□ -2.22
TOPBP1-210ENST00000572787 CHD8Q9HCK8 2581 aa1.15□□□□□ -2.22
TOPBP1-210ENST00000572787 WNK1Q9H4A3 2382 aa1.15□□□□□ -2.23
TOPBP1-210ENST00000572787 ANK2Q01484 3957 aa1.14□□□□□ -2.23
TOPBP1-210ENST00000572787 NCOR1O75376 2440 aa1.14□□□□□ -2.23
TOPBP1-210ENST00000572787 UBR5O95071 2799 aaPredicted RBP1.13□□□□□ -2.23
TOPBP1-210ENST00000572787 FRAS1Q86XX4 4008 aa1.12□□□□□ -2.23
TOPBP1-210ENST00000572787 COL6A5A8TX70 2615 aa1.12□□□□□ -2.23
TOPBP1-210ENST00000572787 NAV2Q8IVL1 2488 aa1.11□□□□□ -2.23
TOPBP1-210ENST00000572787 SPART-AS1P0CW21 52 aa1.11□□□□□ -2.23
TOPBP1-210ENST00000572787 PRKDCP78527 4128 aaKnown RBP1.1□□□□□ -2.23
TOPBP1-210ENST00000572787 APCP25054 2843 aa1.1□□□□□ -2.23
TOPBP1-210ENST00000572787 DEFB110Q30KQ9 67 aa1.09□□□□□ -2.23
TOPBP1-210ENST00000572787 RPL39P5Q59GN2 51 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms