RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 NEXMIFQ5QGS0 1516 aa-0.24□□□□□ -2.45
CDC27-212ENST00000570818 TTC37Q6PGP7 1564 aa-0.24□□□□□ -2.45
CDC27-212ENST00000570818 RGPD1P0DJD0 1748 aa-0.24□□□□□ -2.45
CDC27-212ENST00000570818 FLGP20930 4061 aaPredicted RBP-0.24□□□□□ -2.45
CDC27-212ENST00000570818 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.25□□□□□ -2.455e-8■■■□□ 15.2
CDC27-212ENST00000570818 TIAM2Q8IVF5 1701 aa-0.25□□□□□ -2.45
CDC27-212ENST00000570818 RGPD8O14715 1765 aaPredicted RBP-0.25□□□□□ -2.45
CDC27-212ENST00000570818 RGPD5Q99666 1765 aa-0.25□□□□□ -2.45
CDC27-212ENST00000570818 PCNX1Q96RV3 2341 aa-0.25□□□□□ -2.45
CDC27-212ENST00000570818 EYSQ5T1H1 3165 aa-0.26□□□□□ -2.45
CDC27-212ENST00000570818 LTN1O94822 1766 aa-0.26□□□□□ -2.45
CDC27-212ENST00000570818 ABCC3O15438 1527 aa-0.26□□□□□ -2.45
CDC27-212ENST00000570818 APOBP04114 4563 aaKnown RBP-0.26□□□□□ -2.45
CDC27-212ENST00000570818 PKD1P98161 4303 aa-0.26□□□□□ -2.45
CDC27-212ENST00000570818 S100A16Q96FQ6 103 aaKnown RBP-0.26□□□□□ -2.45
CDC27-212ENST00000570818 NIPBLQ6KC79 2804 aaeCLIP-0.26□□□□□ -2.45
CDC27-212ENST00000570818 TLN2Q9Y4G6 2542 aa-0.26□□□□□ -2.45
CDC27-212ENST00000570818 KNL1Q8NG31 2342 aa-0.26□□□□□ -2.45
CDC27-212ENST00000570818 VCANP13611 3396 aa-0.27□□□□□ -2.45
CDC27-212ENST00000570818 PLIN4Q96Q06 1357 aa-0.27□□□□□ -2.45
CDC27-212ENST00000570818 VPS13BQ7Z7G8 4022 aa-0.27□□□□□ -2.45
CDC27-212ENST00000570818 MYMXA0A1B0GTQ4 84 aa-0.27□□□□□ -2.45
CDC27-212ENST00000570818 H0YGG7 62 aa-0.27□□□□□ -2.45
CDC27-212ENST00000570818 K7EP34 96 aa-0.27□□□□□ -2.45
CDC27-212ENST00000570818 SNRPFP62306 86 aaKnown RBP-0.27□□□□□ -2.45
CDC27-212ENST00000570818 KRTAP19-8Q3LI54 63 aa-0.27□□□□□ -2.45
CDC27-212ENST00000570818 WFDC9Q8NEX5 89 aa-0.27□□□□□ -2.45
CDC27-212ENST00000570818 MTORP42345 2549 aa-0.27□□□□□ -2.45
CDC27-212ENST00000570818 SZT2Q5T011 3432 aa-0.28□□□□□ -2.45
CDC27-212ENST00000570818 PVALEFA0A1B0GWK0 134 aa-0.28□□□□□ -2.45
CDC27-212ENST00000570818 PPLO60437 1756 aa-0.28□□□□□ -2.45
CDC27-212ENST00000570818 POLR1AO95602 1720 aaPredicted RBP-0.28□□□□□ -2.45
CDC27-212ENST00000570818 ADGRG4Q8IZF6 3080 aa-0.29□□□□□ -2.46
CDC27-212ENST00000570818 C4AP0C0L4 1744 aa-0.29□□□□□ -2.46
CDC27-212ENST00000570818 C4BP0C0L5 1744 aa-0.29□□□□□ -2.46
CDC27-212ENST00000570818 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.29□□□□□ -2.46
CDC27-212ENST00000570818 REV3LO60673 3130 aa-0.29□□□□□ -2.46
CDC27-212ENST00000570818 TRAV21A0A0B4J279 112 aa-0.29□□□□□ -2.46
CDC27-212ENST00000570818 COX6B2Q6YFQ2 88 aa-0.29□□□□□ -2.46
CDC27-212ENST00000570818 CSMD2Q7Z408 3487 aa-0.29□□□□□ -2.46
CDC27-212ENST00000570818 TMEM131LA2VDJ0 1609 aa-0.3□□□□□ -2.46
CDC27-212ENST00000570818 KIF14Q15058 1648 aa-0.3□□□□□ -2.46
CDC27-212ENST00000570818 MAP3K4Q9Y6R4 1608 aa-0.3□□□□□ -2.46
CDC27-212ENST00000570818 SACSQ9NZJ4 4579 aa-0.3□□□□□ -2.46
CDC27-212ENST00000570818 CEBPZOSA8MTT3 80 aa-0.3□□□□□ -2.46
CDC27-212ENST00000570818 PLECQ15149 4684 aaKnown RBP-0.3□□□□□ -2.46
CDC27-212ENST00000570818 LINC00643Q86TS7 51 aa-0.3□□□□□ -2.46
CDC27-212ENST00000570818 LOC400499M0QZD8 3231 aa-0.3□□□□□ -2.46
CDC27-212ENST00000570818 C5orf42Q9H799 3197 aa-0.3□□□□□ -2.46
CDC27-212ENST00000570818 BRCA2P51587 3418 aa-0.31□□□□□ -2.46
CDC27-212ENST00000570818 DNAH5Q8TE73 4624 aa-0.31□□□□□ -2.46
CDC27-212ENST00000570818 DMXL2Q8TDJ6 3036 aa-0.31□□□□□ -2.46
CDC27-212ENST00000570818 FREM2Q5SZK8 3169 aa-0.31□□□□□ -2.46
CDC27-212ENST00000570818 NDUFB1O75438 58 aa-0.31□□□□□ -2.46
CDC27-212ENST00000570818 NDUFA3O95167 84 aa-0.31□□□□□ -2.46
CDC27-212ENST00000570818 RABAC1Q9UI14 185 aa-0.31□□□□□ -2.46
CDC27-212ENST00000570818 LRBAP50851 2863 aa-0.31□□□□□ -2.46
CDC27-212ENST00000570818 MUC17Q685J3 4493 aa-0.31□□□□□ -2.46
CDC27-212ENST00000570818 CICQ96RK0 1608 aaPredicted RBP-0.31□□□□□ -2.46
CDC27-212ENST00000570818 CFAP47Q6ZTR5 3102 aa-0.32□□□□□ -2.46
CDC27-212ENST00000570818 ACYP1P07311 99 aa-0.32□□□□□ -2.46
CDC27-212ENST00000570818 PTPN23Q9H3S7 1636 aa-0.32□□□□□ -2.46
CDC27-212ENST00000570818 FAM186AA6NE01 2351 aa-0.32□□□□□ -2.46
CDC27-212ENST00000570818 PDE4DIPQ5VU43 2346 aa-0.32□□□□□ -2.46
CDC27-212ENST00000570818 ADAMTS12P58397 1594 aa-0.32□□□□□ -2.46
CDC27-212ENST00000570818 DNAH3Q8TD57 4116 aa-0.32□□□□□ -2.46
CDC27-212ENST00000570818 CRYBG3Q68DQ2 2970 aa-0.33□□□□□ -2.46
CDC27-212ENST00000570818 NBASA2RRP1 2371 aa-0.33□□□□□ -2.46
CDC27-212ENST00000570818 VPS13CQ709C8 3753 aa-0.33□□□□□ -2.46
CDC27-212ENST00000570818 NESP48681 1621 aa-0.34□□□□□ -2.46
CDC27-212ENST00000570818 CEP350Q5VT06 3117 aa-0.34□□□□□ -2.46
CDC27-212ENST00000570818 KANTRA0A1W2PQU2 76 aa-0.34□□□□□ -2.46
CDC27-212ENST00000570818 NWD1Q149M9 1564 aa-0.34□□□□□ -2.46
CDC27-212ENST00000570818 DOT1LQ8TEK3 1739 aa-0.34□□□□□ -2.46
CDC27-212ENST00000570818 URB2Q14146 1524 aaKnown RBP-0.34□□□□□ -2.46
CDC27-212ENST00000570818 CFAP54Q96N23 3096 aa-0.34□□□□□ -2.46
CDC27-212ENST00000570818 MGAQ8IWI9 3026 aa-0.35□□□□□ -2.46
CDC27-212ENST00000570818 DNAH12Q6ZR08 3092 aa-0.35□□□□□ -2.47
CDC27-212ENST00000570818 UTRNP46939 3433 aa-0.35□□□□□ -2.47
CDC27-212ENST00000570818 SPRR2FQ96RM1 72 aa-0.35□□□□□ -2.47
CDC27-212ENST00000570818 PKHD1P08F94 4074 aa-0.35□□□□□ -2.47
CDC27-212ENST00000570818 USP34Q70CQ2 3546 aa-0.35□□□□□ -2.47
CDC27-212ENST00000570818 CENPFP49454 3210 aa-0.35□□□□□ -2.47
CDC27-212ENST00000570818 RANBP2P49792 3224 aaKnown RBP-0.35□□□□□ -2.47
CDC27-212ENST00000570818 ANK3Q12955 4377 aaKnown RBP-0.35□□□□□ -2.47
CDC27-212ENST00000570818 PKHD1L1Q86WI1 4243 aa-0.35□□□□□ -2.47
CDC27-212ENST00000570818 UACAQ9BZF9 1416 aa-0.36□□□□□ -2.47
CDC27-212ENST00000570818 KRTAP6-2Q3LI66 62 aa-0.36□□□□□ -2.47
CDC27-212ENST00000570818 USP32Q8NFA0 1604 aa-0.36□□□□□ -2.47
CDC27-212ENST00000570818 NCOA2Q15596 1464 aa-0.36□□□□□ -2.47
CDC27-212ENST00000570818 DNAH9Q9NYC9 4486 aa-0.36□□□□□ -2.47
CDC27-212ENST00000570818 WDFY3Q8IZQ1 3526 aa-0.37□□□□□ -2.47
CDC27-212ENST00000570818 PRO3102Q9H379 93 aa-0.37□□□□□ -2.47
CDC27-212ENST00000570818 CMYA5Q8N3K9 4069 aa-0.37□□□□□ -2.47
CDC27-212ENST00000570818 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.37□□□□□ -2.47
CDC27-212ENST00000570818 ARFGEF2Q9Y6D5 1785 aa-0.37□□□□□ -2.47
CDC27-212ENST00000570818 PIK3C2BO00750 1634 aa-0.38□□□□□ -2.47
CDC27-212ENST00000570818 C3orf79P0CE67 100 aa-0.38□□□□□ -2.47
CDC27-212ENST00000570818 IFI27P40305 119 aaPredicted RBP-0.38□□□□□ -2.47
CDC27-212ENST00000570818 GNG2P59768 71 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 200.5 ms