RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 AEBP2Q6ZN18 517 aaPredicted RBP34.2■■■■□ 3.07
CDC27-212ENST00000570818 CHIC1Q5VXU3 224 aa33.37■■■□□ 2.93
CDC27-212ENST00000570818 SENP3Q9H4L4 574 aaPredicted RBP29.25■■■□□ 2.27
CDC27-212ENST00000570818 PHF23Q9BUL5 403 aaPredicted RBP29.22■■■□□ 2.27
CDC27-212ENST00000570818 PLPPR3Q6T4P5 718 aa27.12■■□□□ 1.93
CDC27-212ENST00000570818 FOXD1Q16676 465 aa27.03■■□□□ 1.92
CDC27-212ENST00000570818 ADRA2BP18089 450 aa25.84■■□□□ 1.73
CDC27-212ENST00000570818 PPP6R1Q9UPN7 881 aa25.82■■□□□ 1.72
CDC27-212ENST00000570818 PIAS4Q8N2W9 510 aaPredicted RBP25.55■■□□□ 1.68
CDC27-212ENST00000570818 MSH5O43196 834 aa25.15■■□□□ 1.62
CDC27-212ENST00000570818 SCAF1Q9H7N4 1312 aaKnown RBP23.87■■□□□ 1.41
CDC27-212ENST00000570818 PPP4R3CPQ6ZMV5 832 aa23.81■■□□□ 1.4
CDC27-212ENST00000570818 MAPK8IP2Q13387 824 aaPredicted RBP23.46■■□□□ 1.35
CDC27-212ENST00000570818 NCBP3Q53F19 620 aaKnown RBP23.28■■□□□ 1.32
CDC27-212ENST00000570818 DMRT2Q9Y5R5 561 aa23.25■■□□□ 1.31
CDC27-212ENST00000570818 CNKSR2Q8WXI2 1034 aa23.23■■□□□ 1.31
CDC27-212ENST00000570818 POTEDQ86YR6 584 aa23.04■■□□□ 1.28
CDC27-212ENST00000570818 KCNA4P22459 653 aa23.01■■□□□ 1.27
CDC27-212ENST00000570818 RNF216Q9NWF9 866 aaPredicted RBP22.81■■□□□ 1.24
CDC27-212ENST00000570818 NPM3O75607 178 aaKnown RBP22.76■■□□□ 1.23
CDC27-212ENST00000570818 HOXD11P31277 338 aaPredicted RBP22.71■■□□□ 1.23
CDC27-212ENST00000570818 DCAF8L1A6NGE4 600 aa22.34■■□□□ 1.17
CDC27-212ENST00000570818 DNAJC5BQ9UF47 199 aa22.17■■□□□ 1.14
CDC27-212ENST00000570818 SLC4A1APQ9BWU0 796 aaKnown RBP21.99■■□□□ 1.11
CDC27-212ENST00000570818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.73■■□□□ 1.072e-6■■□□□ 14.1
CDC27-212ENST00000570818 SLC4A2P04920 1241 aa21.48■■□□□ 1.03
CDC27-212ENST00000570818 RNF39Q9H2S5 420 aa21.44■■□□□ 1.02
CDC27-212ENST00000570818 FOXD4L1Q9NU39 408 aa21.33■■□□□ 1.01
CDC27-212ENST00000570818 C1QBPQ07021 282 aaKnown RBP21.26■□□□□ 0.99
CDC27-212ENST00000570818 U3KPZ7 1027 aaPredicted RBP21.24■□□□□ 0.99
CDC27-212ENST00000570818 MYCNP04198 464 aaPredicted RBP21.14■□□□□ 0.97
CDC27-212ENST00000570818 EHMT2Q96KQ7 1210 aa21.14■□□□□ 0.97
CDC27-212ENST00000570818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.13■□□□□ 0.97
CDC27-212ENST00000570818 HNRNPUL2Q1KMD3 747 aaKnown RBP21.13■□□□□ 0.97
CDC27-212ENST00000570818 ZBTB22O15209 634 aa21.1■□□□□ 0.97
CDC27-212ENST00000570818 CACNB1Q02641 598 aaPredicted RBP21.07■□□□□ 0.96
CDC27-212ENST00000570818 APLP2Q06481 763 aa21■□□□□ 0.95
CDC27-212ENST00000570818 SAMD1Q6SPF0 538 aaPredicted RBP21■□□□□ 0.95
CDC27-212ENST00000570818 CSRNP3Q8WYN3 585 aa20.91■□□□□ 0.94
CDC27-212ENST00000570818 CAPN15O75808 1086 aa20.73■□□□□ 0.91
CDC27-212ENST00000570818 SPINK5Q9NQ38 1064 aaPredicted RBP20.68■□□□□ 0.9
CDC27-212ENST00000570818 ATXN8OSP0DMR3 200 aa20.64■□□□□ 0.89
CDC27-212ENST00000570818 ZNF219Q9P2Y4 722 aaPredicted RBP20.63■□□□□ 0.89
CDC27-212ENST00000570818 TRHP20396 242 aaPredicted RBP20.56■□□□□ 0.88
CDC27-212ENST00000570818 ATF5Q9Y2D1 282 aaPredicted RBP20.4■□□□□ 0.86
CDC27-212ENST00000570818 DSG3P32926 999 aa20.33■□□□□ 0.85
CDC27-212ENST00000570818 ABCB7O75027 752 aa20.24■□□□□ 0.83
CDC27-212ENST00000570818 POLA2Q14181 598 aa20.17■□□□□ 0.82
CDC27-212ENST00000570818 ZBTB12Q9Y330 459 aaPredicted RBP19.97■□□□□ 0.79
CDC27-212ENST00000570818 FBLN2P98095 1184 aa19.8■□□□□ 0.76
CDC27-212ENST00000570818 RBM42Q9BTD8 480 aaKnown RBP19.54■□□□□ 0.72
CDC27-212ENST00000570818 MKRN4PQ13434 485 aaPredicted RBP19.53■□□□□ 0.72
CDC27-212ENST00000570818 OSCARQ8IYS5 282 aa19.47■□□□□ 0.71
CDC27-212ENST00000570818 SPDYE2BA6NHP3 402 aa19.35■□□□□ 0.69
CDC27-212ENST00000570818 SPDYE6P0CI01 402 aa19.35■□□□□ 0.69
CDC27-212ENST00000570818 SPDYE2Q495Y8 402 aa19.35■□□□□ 0.69
CDC27-212ENST00000570818 ZNF692Q9BU19 519 aaPredicted RBP19.23■□□□□ 0.67
CDC27-212ENST00000570818 AKT1S1Q96B36 256 aa19.2■□□□□ 0.66
CDC27-212ENST00000570818 SPDYE4A6NLX3 237 aa19.15■□□□□ 0.66
CDC27-212ENST00000570818 SSUH2Q9Y2M2 353 aa19.1■□□□□ 0.65
CDC27-212ENST00000570818 FKBP8Q14318 412 aa19■□□□□ 0.63
CDC27-212ENST00000570818 REM2Q8IYK8 340 aaPredicted RBP18.95■□□□□ 0.62
CDC27-212ENST00000570818 PABPN1Q86U42 306 aaKnown RBP eCLIP18.94■□□□□ 0.62
CDC27-212ENST00000570818 SPDYE1Q8NFV5 336 aaPredicted RBP18.83■□□□□ 0.6
CDC27-212ENST00000570818 PROM2Q8N271 834 aa18.73■□□□□ 0.59
CDC27-212ENST00000570818 CLEC11AQ9Y240 323 aa18.73■□□□□ 0.59
CDC27-212ENST00000570818 PITPNM1O00562 1244 aa18.72■□□□□ 0.59
CDC27-212ENST00000570818 STAG3Q9UJ98 1225 aa18.72■□□□□ 0.59
CDC27-212ENST00000570818 CHRDL2Q6WN34 429 aa18.69■□□□□ 0.58
CDC27-212ENST00000570818 PRR29P0C7W0 189 aa18.56■□□□□ 0.56
CDC27-212ENST00000570818 FBXO3Q9UK99 471 aa18.49■□□□□ 0.55
CDC27-212ENST00000570818 FXR2P51116 673 aaKnown RBP eCLIP18.4■□□□□ 0.54
CDC27-212ENST00000570818 PIP4P2Q8N4L2 257 aa18.37■□□□□ 0.53
CDC27-212ENST00000570818 PRKAR2AP13861 404 aaKnown RBP18.29■□□□□ 0.52
CDC27-212ENST00000570818 PLEKHG5O94827 1062 aa18.28■□□□□ 0.52
CDC27-212ENST00000570818 POTEHQ6S545 545 aa18.27■□□□□ 0.52
CDC27-212ENST00000570818 MIER1Q8N108 512 aa18.22■□□□□ 0.51
CDC27-212ENST00000570818 CHADLQ6NUI6 762 aa18.2■□□□□ 0.5
CDC27-212ENST00000570818 PLCD3Q8N3E9 789 aa18.2■□□□□ 0.5
CDC27-212ENST00000570818 CREBZFQ9NS37 354 aa18.17■□□□□ 0.5
CDC27-212ENST00000570818 VASPP50552 380 aaPredicted RBP18.13■□□□□ 0.49
CDC27-212ENST00000570818 ZBTB47Q9UFB7 747 aaPredicted RBP18.09■□□□□ 0.49
CDC27-212ENST00000570818 FARP1Q9Y4F1 1045 aaPredicted RBP18.07■□□□□ 0.48
CDC27-212ENST00000570818 NPM1P06748 294 aaKnown RBP eCLIP18.04■□□□□ 0.48
CDC27-212ENST00000570818 KLHL34Q8N239 644 aa17.94■□□□□ 0.46
CDC27-212ENST00000570818 MNX1P50219 401 aaPredicted RBP17.92■□□□□ 0.46
CDC27-212ENST00000570818 HAX1O00165 279 aa17.9■□□□□ 0.46
CDC27-212ENST00000570818 PAK3O75914 559 aaPredicted RBP17.81■□□□□ 0.44
CDC27-212ENST00000570818 IFNLR1Q8IU57 520 aaPredicted RBP17.81■□□□□ 0.44
CDC27-212ENST00000570818 C19orf67A6NJJ6 358 aa17.78■□□□□ 0.44
CDC27-212ENST00000570818 CD44P16070 742 aaKnown RBP17.78■□□□□ 0.44
CDC27-212ENST00000570818 SPOCK2Q92563 424 aa17.72■□□□□ 0.43
CDC27-212ENST00000570818 NUBP1P53384 320 aa17.66■□□□□ 0.42
CDC27-212ENST00000570818 FAM212AQ96EL1 285 aa17.66■□□□□ 0.42
CDC27-212ENST00000570818 ZRANB1Q9UGI0 708 aa17.65■□□□□ 0.42
CDC27-212ENST00000570818 RASEFQ8IZ41 740 aa17.63■□□□□ 0.41
CDC27-212ENST00000570818 TSPYL2Q9H2G4 693 aaPredicted RBP17.63■□□□□ 0.41
CDC27-212ENST00000570818 DCAF8Q5TAQ9 597 aa17.58■□□□□ 0.4
CDC27-212ENST00000570818 GSE1Q14687 1217 aa17.57■□□□□ 0.4
CDC27-212ENST00000570818 EVX2Q03828 476 aa17.55■□□□□ 0.4
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