RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 BATFQ16520 125 aa9.57□□□□□ -0.88
CNEP1R1-210ENST00000568890 A0A1B0GX51 115 aa9.52□□□□□ -0.89
CNEP1R1-210ENST00000568890 COX6CP09669 75 aa9.52□□□□□ -0.89
CNEP1R1-210ENST00000568890 LPAP08519 4548 aa9.52□□□□□ -0.89
CNEP1R1-210ENST00000568890 SPAG11AQ6PDA7 123 aa9.52□□□□□ -0.89
CNEP1R1-210ENST00000568890 RETNLBQ9BQ08 111 aa9.52□□□□□ -0.89
CNEP1R1-210ENST00000568890 LRP2P98164 4655 aa9.51□□□□□ -0.89
CNEP1R1-210ENST00000568890 SCGB1C2P0DMR2 95 aa9.5□□□□□ -0.89
CNEP1R1-210ENST00000568890 SPINK1P00995 79 aa9.5□□□□□ -0.89
CNEP1R1-210ENST00000568890 C4orf48Q5BLP8 95 aa9.5□□□□□ -0.89
CNEP1R1-210ENST00000568890 SNHG12Q9BXW3 62 aa9.5□□□□□ -0.89
CNEP1R1-210ENST00000568890 HRCT1Q6UXD1 115 aa9.49□□□□□ -0.89
CNEP1R1-210ENST00000568890 LST1O00453 97 aa9.48□□□□□ -0.89
CNEP1R1-210ENST00000568890 SNCGO76070 127 aa9.48□□□□□ -0.89
CNEP1R1-210ENST00000568890 TAX1BP3O14907 124 aa9.47□□□□□ -0.89
CNEP1R1-210ENST00000568890 OCIAD2Q56VL3 154 aa9.47□□□□□ -0.89
CNEP1R1-210ENST00000568890 PPDPFLQ8WWR9 84 aa9.47□□□□□ -0.89
CNEP1R1-210ENST00000568890 IGLV8-61A0A075B6I0 122 aa9.46□□□□□ -0.9
CNEP1R1-210ENST00000568890 H3BUT2 72 aa9.45□□□□□ -0.9
CNEP1R1-210ENST00000568890 TCL1BO95988 128 aa9.45□□□□□ -0.9
CNEP1R1-210ENST00000568890 PCP4L1A6NKN8 68 aa9.44□□□□□ -0.9
CNEP1R1-210ENST00000568890 TRACP01848 142 aa9.44□□□□□ -0.9
CNEP1R1-210ENST00000568890 FABP2P12104 132 aa9.44□□□□□ -0.9
CNEP1R1-210ENST00000568890 NDUFV3P56181 108 aaKnown RBP9.44□□□□□ -0.9
CNEP1R1-210ENST00000568890 PRR4Q16378 134 aa9.44□□□□□ -0.9
CNEP1R1-210ENST00000568890 IGFL1Q6UW32 110 aa9.43□□□□□ -0.9
CNEP1R1-210ENST00000568890 DNAL4O96015 105 aa9.43□□□□□ -0.9
CNEP1R1-210ENST00000568890 F8WEM9 126 aa9.42□□□□□ -0.9
CNEP1R1-210ENST00000568890 ORMDL1Q9P0S3 153 aa9.42□□□□□ -0.9
CNEP1R1-210ENST00000568890 C9orf118A6NHY6 69 aa9.41□□□□□ -0.9
CNEP1R1-210ENST00000568890 RPS29P62273 56 aaKnown RBP9.41□□□□□ -0.9
CNEP1R1-210ENST00000568890 CD164Q04900 197 aa9.4□□□□□ -0.9
CNEP1R1-210ENST00000568890 H3BMG7 143 aa9.39□□□□□ -0.91
CNEP1R1-210ENST00000568890 UBR4Q5T4S7 5183 aa9.38□□□□□ -0.91
CNEP1R1-210ENST00000568890 TMEM256-PLSCR3K7ERE1 68 aa9.38□□□□□ -0.91
CNEP1R1-210ENST00000568890 Q6JHZ5 121 aa9.37□□□□□ -0.91
CNEP1R1-210ENST00000568890 A0A1B0GV72 72 aa9.36□□□□□ -0.91
CNEP1R1-210ENST00000568890 BAALC-AS2P0C853 105 aa9.36□□□□□ -0.91
CNEP1R1-210ENST00000568890 ATXN8Q156A1 80 aa9.36□□□□□ -0.91
CNEP1R1-210ENST00000568890 A0A1W2PPM0 123 aa9.35□□□□□ -0.91
CNEP1R1-210ENST00000568890 GHRHP01286 108 aa9.35□□□□□ -0.91
CNEP1R1-210ENST00000568890 IGLV7-46A0A075B6I9 117 aa9.33□□□□□ -0.92
CNEP1R1-210ENST00000568890 UBE2V1Q13404 147 aa9.33□□□□□ -0.92
CNEP1R1-210ENST00000568890 COL5A1-AS1Q5SY13 56 aa9.33□□□□□ -0.92
CNEP1R1-210ENST00000568890 Q5XG85 94 aa9.33□□□□□ -0.92
CNEP1R1-210ENST00000568890 TRBV20-1A0A075B6N2 111 aa9.32□□□□□ -0.92
CNEP1R1-210ENST00000568890 H3BQ85 93 aa9.32□□□□□ -0.92
CNEP1R1-210ENST00000568890 TRBV7-7A0A0K0K1E9 115 aa9.3□□□□□ -0.92
CNEP1R1-210ENST00000568890 A0A1W2PNM2 257 aa9.3□□□□□ -0.92
CNEP1R1-210ENST00000568890 ANKRD29Q8N6D5 301 aa9.3□□□□□ -0.92
CNEP1R1-210ENST00000568890 C1orf195Q5TG92 126 aa9.29□□□□□ -0.92
CNEP1R1-210ENST00000568890 LYRM7Q5U5X0 104 aa9.29□□□□□ -0.92
CNEP1R1-210ENST00000568890 LIMD2Q9BT23 127 aa9.29□□□□□ -0.92
CNEP1R1-210ENST00000568890 C9JAW5 83 aa9.28□□□□□ -0.92
CNEP1R1-210ENST00000568890 FP248Q71RG6 208 aaPredicted RBP9.28□□□□□ -0.92
CNEP1R1-210ENST00000568890 Q6Q795 121 aa9.28□□□□□ -0.92
CNEP1R1-210ENST00000568890 MTURNQ8N3F0 131 aa9.27□□□□□ -0.93
CNEP1R1-210ENST00000568890 TEN1Q86WV5 123 aa9.26□□□□□ -0.93
CNEP1R1-210ENST00000568890 TRBV7-4A0A0J9YYF1 115 aa9.25□□□□□ -0.93
CNEP1R1-210ENST00000568890 TPRXLQ17RH7 258 aa9.25□□□□□ -0.93
CNEP1R1-210ENST00000568890 KRTAP13-3Q3SY46 172 aa9.24□□□□□ -0.93
CNEP1R1-210ENST00000568890 RBM3P98179 157 aaKnown RBP9.24□□□□□ -0.93
CNEP1R1-210ENST00000568890 SPCS1Q9Y6A9 102 aa9.24□□□□□ -0.93
CNEP1R1-210ENST00000568890 A0A087WSZ3 146 aa9.22□□□□□ -0.93
CNEP1R1-210ENST00000568890 ASB16-AS1Q495Z4 193 aa9.21□□□□□ -0.93
CNEP1R1-210ENST00000568890 CCKP06307 115 aa9.2□□□□□ -0.94
CNEP1R1-210ENST00000568890 RNF213Q63HN8 5207 aa9.19□□□□□ -0.94
CNEP1R1-210ENST00000568890 OBSCN-AS1Q96MR7 158 aa9.19□□□□□ -0.94
CNEP1R1-210ENST00000568890 SMCPP49901 116 aaPredicted RBP9.19□□□□□ -0.94
CNEP1R1-210ENST00000568890 DSCR8Q96T75 97 aa9.18□□□□□ -0.94
CNEP1R1-210ENST00000568890 CDIP1Q9H305 208 aa9.17□□□□□ -0.94
CNEP1R1-210ENST00000568890 Q96NJ1 140 aa9.17□□□□□ -0.94
CNEP1R1-210ENST00000568890 MUC2Q02817 5179 aa9.17□□□□□ -0.94
CNEP1R1-210ENST00000568890 JMJD7-PLA2G4BH0Y9G9 81 aa9.15□□□□□ -0.94
CNEP1R1-210ENST00000568890 H3BT86 120 aa9.15□□□□□ -0.94
CNEP1R1-210ENST00000568890 K7EP34 96 aa9.15□□□□□ -0.94
CNEP1R1-210ENST00000568890 C14orf132Q9NPU4 83 aa9.15□□□□□ -0.94
CNEP1R1-210ENST00000568890 PRO0461Q9UI25 63 aa9.15□□□□□ -0.94
CNEP1R1-210ENST00000568890 Q6ZQT0 140 aa9.15□□□□□ -0.95
CNEP1R1-210ENST00000568890 VPS25Q9BRG1 176 aa9.15□□□□□ -0.95
CNEP1R1-210ENST00000568890 C9orf92A6NGG3 77 aa9.13□□□□□ -0.95
CNEP1R1-210ENST00000568890 LOC110117498A0A087WWA1 95 aa9.12□□□□□ -0.95
CNEP1R1-210ENST00000568890 SS18L2Q9UHA2 77 aa9.11□□□□□ -0.95
CNEP1R1-210ENST00000568890 XP32Q5T750 250 aa9.1□□□□□ -0.95
CNEP1R1-210ENST00000568890 DEFB116Q30KQ4 102 aa9.08□□□□□ -0.96
CNEP1R1-210ENST00000568890 LINC00472Q9H8W2 130 aa9.08□□□□□ -0.96
CNEP1R1-210ENST00000568890 PDE6GP18545 87 aa9.04□□□□□ -0.96
CNEP1R1-210ENST00000568890 GTF2H5Q6ZYL4 71 aa9.04□□□□□ -0.96
CNEP1R1-210ENST00000568890 MUC17Q685J3 4493 aa9.02□□□□□ -0.97
CNEP1R1-210ENST00000568890 IGKV4-1P06312 121 aa9.01□□□□□ -0.97
CNEP1R1-210ENST00000568890 F8W1H4 67 aa8.99□□□□□ -0.97
CNEP1R1-210ENST00000568890 A0A1B0GW54 56 aa8.98□□□□□ -0.97
CNEP1R1-210ENST00000568890 NOTCH2NLQ7Z3S9 236 aa8.97□□□□□ -0.97
CNEP1R1-210ENST00000568890 SIGMAR1Q99720 223 aa8.97□□□□□ -0.97
CNEP1R1-210ENST00000568890 KRTAP4-1Q9BYQ7 146 aa8.96□□□□□ -0.98
CNEP1R1-210ENST00000568890 ETDBQ3ZM63 59 aa8.95□□□□□ -0.98
CNEP1R1-210ENST00000568890 A0A1B0GV90 55 aa8.95□□□□□ -0.98
CNEP1R1-210ENST00000568890 DSCR10P59022 87 aa8.93□□□□□ -0.98
CNEP1R1-210ENST00000568890 C21orf62-AS1Q17RA5 79 aa8.93□□□□□ -0.98
CNEP1R1-210ENST00000568890 NREPQ16612 68 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms