RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 MKI67P46013 3256 aaKnown RBP3.99□□□□□ -1.77
CDH13-209ENST00000567109 A0A1W2PNN7 141 aa3.99□□□□□ -1.77
CDH13-209ENST00000567109 SEC61BP60468 96 aaKnown RBP3.99□□□□□ -1.77
CDH13-209ENST00000567109 NOTCH1P46531 2555 aa3.99□□□□□ -1.77
CDH13-209ENST00000567109 A0A0G2JQZ4 141 aa3.98□□□□□ -1.77
CDH13-209ENST00000567109 UNC79Q9P2D8 2635 aa3.98□□□□□ -1.77
CDH13-209ENST00000567109 TNP2Q05952 138 aa3.98□□□□□ -1.77
CDH13-209ENST00000567109 LINC01558Q9Y6Z2 57 aa3.98□□□□□ -1.77
CDH13-209ENST00000567109 KRTAP16-1A8MUX0 517 aa3.97□□□□□ -1.77
CDH13-209ENST00000567109 FP248Q71RG6 208 aaPredicted RBP3.97□□□□□ -1.77
CDH13-209ENST00000567109 CHD6Q8TD26 2715 aa3.97□□□□□ -1.77
CDH13-209ENST00000567109 GCN1Q92616 2671 aaKnown RBP3.97□□□□□ -1.77
CDH13-209ENST00000567109 A0A0C4DFX4 3053 aa3.97□□□□□ -1.77
CDH13-209ENST00000567109 CSAG1Q6PB30 78 aa3.97□□□□□ -1.77
CDH13-209ENST00000567109 CNBPP62633 177 aaKnown RBP3.96□□□□□ -1.78
CDH13-209ENST00000567109 R4GN34 69 aa3.96□□□□□ -1.78
CDH13-209ENST00000567109 COL6A5A8TX70 2615 aa3.96□□□□□ -1.78
CDH13-209ENST00000567109 FLNBO75369 2602 aaKnown RBP3.95□□□□□ -1.78
CDH13-209ENST00000567109 BAHCC1Q9P281 2608 aa3.95□□□□□ -1.78
CDH13-209ENST00000567109 WDFY4Q6ZS81 3184 aa3.95□□□□□ -1.78
CDH13-209ENST00000567109 Q8N9P0 234 aaPredicted RBP3.95□□□□□ -1.78
CDH13-209ENST00000567109 BRCA2P51587 3418 aa3.94□□□□□ -1.78
CDH13-209ENST00000567109 ITPR2Q14571 2701 aa3.94□□□□□ -1.78
CDH13-209ENST00000567109 A0A1B0GU33 70 aa3.94□□□□□ -1.78
CDH13-209ENST00000567109 RANBP2P49792 3224 aaKnown RBP3.92□□□□□ -1.78
CDH13-209ENST00000567109 H1FX-AS1Q4G0G2 97 aa3.91□□□□□ -1.78
CDH13-209ENST00000567109 DNAH14Q0VDD8 3507 aa3.91□□□□□ -1.78
CDH13-209ENST00000567109 CHD9Q3L8U1 2897 aa3.91□□□□□ -1.78
CDH13-209ENST00000567109 LCE6AA0A183 80 aa3.91□□□□□ -1.78
CDH13-209ENST00000567109 SPRR1AP35321 89 aa3.91□□□□□ -1.78
CDH13-209ENST00000567109 SPRR1BP22528 89 aa3.9□□□□□ -1.78
CDH13-209ENST00000567109 A0A1W2PNM2 257 aa3.9□□□□□ -1.78
CDH13-209ENST00000567109 DMAC1Q96GE9 116 aa3.9□□□□□ -1.78
CDH13-209ENST00000567109 ZNF292O60281 2723 aa3.9□□□□□ -1.79
CDH13-209ENST00000567109 TRIOO75962 3097 aa3.9□□□□□ -1.79
CDH13-209ENST00000567109 FAM229BQ4G0N7 80 aa3.9□□□□□ -1.79
CDH13-209ENST00000567109 PRUNE2Q8WUY3 3088 aa3.89□□□□□ -1.79
CDH13-209ENST00000567109 CRYBG3Q68DQ2 2970 aa3.89□□□□□ -1.79
CDH13-209ENST00000567109 LAMA3Q16787 3333 aa3.89□□□□□ -1.79
CDH13-209ENST00000567109 OXTP01178 125 aa3.89□□□□□ -1.79
CDH13-209ENST00000567109 TRANK1O15050 2925 aa3.88□□□□□ -1.79
CDH13-209ENST00000567109 ZCCHC13Q8WW36 166 aaKnown RBP3.88□□□□□ -1.79
CDH13-209ENST00000567109 Q5VV11 94 aa3.88□□□□□ -1.79
CDH13-209ENST00000567109 VPS13AQ96RL7 3174 aa3.87□□□□□ -1.79
CDH13-209ENST00000567109 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.86□□□□□ -1.79
CDH13-209ENST00000567109 FREM2Q5SZK8 3169 aa3.86□□□□□ -1.79
CDH13-209ENST00000567109 STAB2Q8WWQ8 2551 aa3.86□□□□□ -1.79
CDH13-209ENST00000567109 SPINK7P58062 85 aa3.86□□□□□ -1.79
CDH13-209ENST00000567109 ASH1LQ9NR48 2969 aaKnown RBP3.85□□□□□ -1.79
CDH13-209ENST00000567109 SPEGQ15772 3267 aa3.85□□□□□ -1.79
CDH13-209ENST00000567109 APCP25054 2843 aa3.84□□□□□ -1.79
CDH13-209ENST00000567109 ITPR1Q14643 2758 aa3.84□□□□□ -1.79
CDH13-209ENST00000567109 NSD1Q96L73 2696 aaPredicted RBP3.84□□□□□ -1.79
CDH13-209ENST00000567109 M0QZ58 72 aa3.84□□□□□ -1.79
CDH13-209ENST00000567109 FRYQ5TBA9 3013 aa3.84□□□□□ -1.8
CDH13-209ENST00000567109 USP34Q70CQ2 3546 aa3.83□□□□□ -1.8
CDH13-209ENST00000567109 Q6ZR54 194 aa3.83□□□□□ -1.8
CDH13-209ENST00000567109 UNC80Q8N2C7 3258 aa3.83□□□□□ -1.8
CDH13-209ENST00000567109 HTTP42858 3142 aa3.83□□□□□ -1.8
CDH13-209ENST00000567109 MAP1AP78559 2803 aaPredicted RBP3.82□□□□□ -1.8
CDH13-209ENST00000567109 LINC00472Q9H8W2 130 aa3.81□□□□□ -1.8
CDH13-209ENST00000567109 PLAC8Q9NZF1 115 aa3.81□□□□□ -1.8
CDH13-209ENST00000567109 MGAQ8IWI9 3026 aa3.8□□□□□ -1.8
CDH13-209ENST00000567109 CYSTM1Q9H1C7 97 aa3.8□□□□□ -1.8
CDH13-209ENST00000567109 TEP1Q99973 2627 aaKnown RBP3.8□□□□□ -1.8
CDH13-209ENST00000567109 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
CDH13-209ENST00000567109 ADM2Q7Z4H4 148 aa3.79□□□□□ -1.8
CDH13-209ENST00000567109 SETXQ7Z333 2677 aaKnown RBP3.79□□□□□ -1.8
CDH13-209ENST00000567109 MMP24-AS1A0A0U1RRL7 71 aa3.78□□□□□ -1.8
CDH13-209ENST00000567109 SPATA8Q6RVD6 105 aa3.77□□□□□ -1.81
CDH13-209ENST00000567109 CDH23Q9H251 3354 aa3.77□□□□□ -1.81
CDH13-209ENST00000567109 COL6A3P12111 3177 aa3.76□□□□□ -1.81
CDH13-209ENST00000567109 KRTAP29-1A8MX34 341 aaPredicted RBP3.76□□□□□ -1.81
CDH13-209ENST00000567109 ROMO1P60602 79 aa3.75□□□□□ -1.81
CDH13-209ENST00000567109 A6NN06 94 aa3.75□□□□□ -1.81
CDH13-209ENST00000567109 VCANP13611 3396 aa3.75□□□□□ -1.81
CDH13-209ENST00000567109 NIPBLQ6KC79 2804 aaeCLIP3.75□□□□□ -1.81
CDH13-209ENST00000567109 Q5W150 140 aa3.74□□□□□ -1.81
CDH13-209ENST00000567109 RPL37P61927 97 aaKnown RBP3.74□□□□□ -1.81
CDH13-209ENST00000567109 KRTAP26-1Q6PEX3 210 aa3.73□□□□□ -1.81
CDH13-209ENST00000567109 DSPP15924 2871 aaKnown RBP3.73□□□□□ -1.81
CDH13-209ENST00000567109 KRTAP4-16G5E9R7 235 aaPredicted RBP3.73□□□□□ -1.81
CDH13-209ENST00000567109 CHD7Q9P2D1 2997 aa3.73□□□□□ -1.81
CDH13-209ENST00000567109 FRYLO94915 3013 aa3.72□□□□□ -1.81
CDH13-209ENST00000567109 LAMA1P25391 3075 aa3.72□□□□□ -1.81
CDH13-209ENST00000567109 C20orf166-AS1Q96NR2 134 aa3.72□□□□□ -1.81
CDH13-209ENST00000567109 KRTAP10-1P60331 282 aa3.72□□□□□ -1.81
CDH13-209ENST00000567109 SZT2Q5T011 3432 aa3.72□□□□□ -1.81
CDH13-209ENST00000567109 BOD1L1Q8NFC6 3051 aa3.71□□□□□ -1.81
CDH13-209ENST00000567109 KRTAP1-5Q9BYS1 174 aa3.71□□□□□ -1.82
CDH13-209ENST00000567109 LRBAP50851 2863 aa3.71□□□□□ -1.82
CDH13-209ENST00000567109 KALRNO60229 2985 aa3.71□□□□□ -1.82
CDH13-209ENST00000567109 CFAP47Q6ZTR5 3102 aa3.71□□□□□ -1.82
CDH13-209ENST00000567109 NBPF19A0A087WUL8 3843 aa3.71□□□□□ -1.82
CDH13-209ENST00000567109 KRTAP10-2P60368 255 aa3.7□□□□□ -1.82
CDH13-209ENST00000567109 NOTCH2NLQ7Z3S9 236 aa3.7□□□□□ -1.82
CDH13-209ENST00000567109 IGSF10Q6WRI0 2623 aa3.69□□□□□ -1.82
CDH13-209ENST00000567109 NBEAL2Q6ZNJ1 2754 aa3.69□□□□□ -1.82
CDH13-209ENST00000567109 COL12A1Q99715 3063 aa3.68□□□□□ -1.82
CDH13-209ENST00000567109 Q6ZRN7 208 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms